BLASTX nr result

ID: Cornus23_contig00031255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00031255
         (477 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]    64   1e-10
ref|XP_010654293.1| PREDICTED: uncharacterized protein LOC104880...    67   4e-09
ref|XP_010654292.1| PREDICTED: uncharacterized protein LOC104880...    67   5e-09

>emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]
          Length = 1068

 Score = 63.9 bits (154), Expect(2) = 1e-10
 Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
 Frame = +1

Query: 268  SSKFNVNLTEFQRKKREGAKREVTNKRLEDYLDPVLLSAIRTKIGGKRKRDGD-SKLKSE 444
            S + +V   E  + K+E   RE+ NK+LEDYLDP LLSA+ +KI G++K+DG+  KLK E
Sbjct: 969  SHRNDVRSREDLQTKKEAKVREMENKKLEDYLDPALLSAVSSKI-GRQKKDGEMKKLKRE 1027

Query: 445  ---FERPVDELSVF 477
               F+ PVDEL VF
Sbjct: 1028 IQKFQWPVDELKVF 1041



 Score = 28.9 bits (63), Expect(2) = 1e-10
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 138  RRWFESSRYGRTDPKTPPSTFLSALSLIHL 227
            RR  ESS   R DP  P  TF+S+LS  +L
Sbjct: 911  RRSLESSGNRRRDPTAPHPTFVSSLSATYL 940


>ref|XP_010654293.1| PREDICTED: uncharacterized protein LOC104880171 isoform X2 [Vitis
           vinifera]
          Length = 123

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 50/121 (41%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
 Frame = +1

Query: 127 DEAREDGSSPLATVEQIQXXXXXXXXXXXXXXXXXXXXXADDLIRCDSSKFNVNLTEFQR 306
           + +R +  SPLATVE+IQ                        LIR  +   +V   E  +
Sbjct: 2   ERSRGEAWSPLATVEEIQRR----------------------LIRPSN---DVRSREDLQ 36

Query: 307 KKREGAKREVTNKRLEDYLDPVLLSAIRTKIGGKRKRDGD-SKLKSE---FERPVDELSV 474
            K+E   RE+ NK+LEDYLDP LLSA+ +KI G++K+DG+  KLK E   F+ PVDEL V
Sbjct: 37  TKKEAKVREMENKKLEDYLDPALLSAVSSKI-GRQKKDGEMKKLKREIQKFQWPVDELKV 95

Query: 475 F 477
           F
Sbjct: 96  F 96


>ref|XP_010654292.1| PREDICTED: uncharacterized protein LOC104880171 isoform X1 [Vitis
           vinifera]
          Length = 134

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
 Frame = +1

Query: 127 DEAREDGSSPLATVEQIQXXXXXXXXXXXXXXXXXXXXXADDLIRCDSSKFNVNLTEFQR 306
           + +R +  SPLATVE+IQ                             S + +V   E  +
Sbjct: 2   ERSRGEAWSPLATVEEIQRRLIRPSYLLSPPLT--------------SFRNDVRSREDLQ 47

Query: 307 KKREGAKREVTNKRLEDYLDPVLLSAIRTKIGGKRKRDGD-SKLKSE---FERPVDELSV 474
            K+E   RE+ NK+LEDYLDP LLSA+ +KI G++K+DG+  KLK E   F+ PVDEL V
Sbjct: 48  TKKEAKVREMENKKLEDYLDPALLSAVSSKI-GRQKKDGEMKKLKREIQKFQWPVDELKV 106

Query: 475 F 477
           F
Sbjct: 107 F 107


Top