BLASTX nr result

ID: Cornus23_contig00031226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00031226
         (252 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP16349.1| unnamed protein product [Coffea canephora]             66   1e-08
ref|XP_012065623.1| PREDICTED: F-box/WD-40 repeat-containing pro...    59   1e-06
ref|XP_012475416.1| PREDICTED: F-box/WD-40 repeat-containing pro...    59   1e-06
gb|KHG04593.1| hypothetical protein F383_29957 [Gossypium arboreum]    59   1e-06
ref|XP_012065627.1| PREDICTED: F-box/WD-40 repeat-containing pro...    58   2e-06
ref|XP_008356750.1| PREDICTED: F-box/WD-40 repeat-containing pro...    58   2e-06
gb|KDP43603.1| hypothetical protein JCGZ_16890 [Jatropha curcas]       58   2e-06
ref|XP_010103277.1| F-box/WD-40 repeat-containing protein [Morus...    58   3e-06
ref|XP_010659517.1| PREDICTED: F-box/WD-40 repeat-containing pro...    57   4e-06
emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]    57   4e-06
ref|XP_012830725.1| PREDICTED: F-box/WD-40 repeat-containing pro...    57   5e-06
ref|XP_012830723.1| PREDICTED: F-box/WD-40 repeat-containing pro...    57   5e-06
gb|EYU42987.1| hypothetical protein MIMGU_mgv1a006741mg [Erythra...    57   5e-06

>emb|CDP16349.1| unnamed protein product [Coffea canephora]
          Length = 530

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 31/57 (54%), Positives = 39/57 (68%), Gaps = 7/57 (12%)
 Frame = -2

Query: 152 ASGGLLP-------SKRRNGIHALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           +S GL P        K++  IHALSHD LC IFT LDL+ + RC+ VCK+W+TVINK
Sbjct: 4   SSSGLRPPPQPAAKKKQKTTIHALSHDILCMIFTFLDLVQLIRCSAVCKSWSTVINK 60


>ref|XP_012065623.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Jatropha curcas]
          Length = 433

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
 Frame = -2

Query: 164 MNATASGGLLPSKRRN-----GIHALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           M+ T  G   P+K+R+      I  L HD LC IF++LDL D+ RC+ VCK+WNT+I +
Sbjct: 1   MSPTPGGKWSPAKKRSWRGPTSIQFLEHDILCIIFSVLDLFDLVRCSAVCKSWNTIIKE 59


>ref|XP_012475416.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030 isoform
           X1 [Gossypium raimondii] gi|763757634|gb|KJB24965.1|
           hypothetical protein B456_004G170100 [Gossypium
           raimondii] gi|763757637|gb|KJB24968.1| hypothetical
           protein B456_004G170100 [Gossypium raimondii]
          Length = 430

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
 Frame = -2

Query: 149 SGGLLPSKRRNGIHA------LSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           SGG    +RR+G+        L HD LC IF+ LD+ D+ RCT VCK+WN VI K
Sbjct: 6   SGGSTAMRRRSGVRGGTRMECLEHDILCIIFSFLDVFDLVRCTAVCKSWNAVIRK 60


>gb|KHG04593.1| hypothetical protein F383_29957 [Gossypium arboreum]
          Length = 430

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
 Frame = -2

Query: 149 SGGLLPSKRRNGIHA------LSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           SGG    +RR+G+        L HD LC IF+ LD+ D+ RCT VCK+WN VI K
Sbjct: 6   SGGSTAMRRRSGVRGGTRMEWLEHDILCIIFSFLDVFDLVRCTAVCKSWNAVIRK 60


>ref|XP_012065627.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Jatropha curcas]
          Length = 433

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
 Frame = -2

Query: 164 MNATASGGLLPSKRRNG-----IHALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVI 9
           M+ T  G   P+K+R+      I  L HD LC IF++LDL D+ RC+ VCK+WNT+I
Sbjct: 1   MSPTPGGKRSPAKKRSWRGPTTIQFLEHDILCIIFSVLDLFDLVRCSAVCKSWNTII 57


>ref|XP_008356750.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Malus domestica]
          Length = 432

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 29/37 (78%)
 Frame = -2

Query: 113 IHALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           IH+L H+ LCTIF+ LD  D+A C+ VCK W+TVINK
Sbjct: 24  IHSLQHEILCTIFSFLDFFDLASCSAVCKTWSTVINK 60


>gb|KDP43603.1| hypothetical protein JCGZ_16890 [Jatropha curcas]
          Length = 201

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
 Frame = -2

Query: 164 MNATASGGLLPSKRRNG-----IHALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           M  T  G   P+K+R+      I  L HD LC IF++LDL D+ RC+ VCK+WNT+I +
Sbjct: 1   MTPTPGGKWSPAKKRSWRGPTTIQFLEHDILCIIFSVLDLFDLVRCSAVCKSWNTIIKE 59


>ref|XP_010103277.1| F-box/WD-40 repeat-containing protein [Morus notabilis]
           gi|587907288|gb|EXB95302.1| F-box/WD-40
           repeat-containing protein [Morus notabilis]
          Length = 424

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
 Frame = -2

Query: 164 MNATASGGLLPSKRRNG----IHALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           M+ T +G    +K+R+G    IH+L HD LC +F+ LDL D+ R + VCK+WN +INK
Sbjct: 1   MDPTPAG----NKKRHGGPTTIHSLEHDILCIVFSFLDLFDLVRSSAVCKSWNAIINK 54


>ref|XP_010659517.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030 [Vitis
           vinifera] gi|297736340|emb|CBI24978.3| unnamed protein
           product [Vitis vinifera]
          Length = 435

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
 Frame = -2

Query: 164 MNATASGGLLPSKRRNGIH----ALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           M+ T + G   +++R        +L+HD LC IF LLDL D+ RC+ VCK+WN VINK
Sbjct: 1   MDGTTADGQSQAQKRMSSRVPATSLAHDILCMIFVLLDLFDLVRCSAVCKSWNKVINK 58


>emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]
          Length = 471

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
 Frame = -2

Query: 164 MNATASGGLLPSKRRNGIH----ALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           M+ T + G   +++R        +L+HD LC IF LLDL D+ RC+ VCK+WN VINK
Sbjct: 1   MDGTTADGQSQAQKRMSSRVPATSLAHDILCMIFVLLDLFDLVRCSAVCKSWNKVINK 58


>ref|XP_012830725.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030 isoform
           X3 [Erythranthe guttatus]
          Length = 433

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
 Frame = -2

Query: 164 MNATASGGLLPSKRRNG-----IHALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           M  TAS G  P K+R       + AL +D L  IFT LDL+ + RC+ VCK+W+TVI K
Sbjct: 1   METTASAGAAPVKKRRRAPKTTVEALGNDVLSMIFTFLDLVHLIRCSAVCKSWSTVIRK 59


>ref|XP_012830723.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030 isoform
           X1 [Erythranthe guttatus]
           gi|848859702|ref|XP_012830724.1| PREDICTED: F-box/WD-40
           repeat-containing protein At3g52030 isoform X2
           [Erythranthe guttatus]
          Length = 436

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
 Frame = -2

Query: 164 MNATASGGLLPSKRRNG-----IHALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           M  TAS G  P K+R       + AL +D L  IFT LDL+ + RC+ VCK+W+TVI K
Sbjct: 1   METTASAGAAPVKKRRRAPKTTVEALGNDVLSMIFTFLDLVHLIRCSAVCKSWSTVIRK 59


>gb|EYU42987.1| hypothetical protein MIMGU_mgv1a006741mg [Erythranthe guttata]
          Length = 433

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
 Frame = -2

Query: 164 MNATASGGLLPSKRRNG-----IHALSHDTLCTIFTLLDLIDVARCTTVCKNWNTVINK 3
           M  TAS G  P K+R       + AL +D L  IFT LDL+ + RC+ VCK+W+TVI K
Sbjct: 1   METTASAGAAPVKKRRRAPKTTVEALGNDVLSMIFTFLDLVHLIRCSAVCKSWSTVIRK 59


Top