BLASTX nr result
ID: Cornus23_contig00031010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00031010
(553 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 252 7e-65
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su... 248 1e-63
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su... 248 1e-63
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su... 248 2e-63
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su... 248 2e-63
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 243 4e-62
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 243 4e-62
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su... 241 2e-61
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su... 241 2e-61
gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r... 241 2e-61
ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV su... 241 2e-61
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su... 239 5e-61
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su... 239 5e-61
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su... 239 5e-61
ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV su... 239 5e-61
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 239 5e-61
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV su... 239 5e-61
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 239 5e-61
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope... 239 5e-61
emb|CDP09818.1| unnamed protein product [Coffea canephora] 236 5e-60
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 252 bits (644), Expect = 7e-65
Identities = 125/184 (67%), Positives = 152/184 (82%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
LSSDS+S+KNM+DE+ CGL++ E + K LMVDSN DFLVG EE +S + VE+MCY
Sbjct: 643 LSSDSNSQKNMMDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCY 702
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
EKQ+SAALS+ASV +FKQVF DIQNL+Y++A+KDNSLL M KAGSKGNL++LVQHS+CLG
Sbjct: 703 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLG 762
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQHSLVPLSFR PHQLSCAAWNN K+ T K ++ +E A +IP AVVE+SF+TGLNPL
Sbjct: 763 LQHSLVPLSFRFPHQLSCAAWNNQKSHGLTQKVDDTAESAKNYIPYAVVESSFMTGLNPL 822
Query: 13 ECFV 2
E FV
Sbjct: 823 ESFV 826
>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 1211
Score = 248 bits (634), Expect = 1e-63
Identities = 125/184 (67%), Positives = 149/184 (80%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
+SSD +SR+NMIDEV CGL++AE +S+I+LLM N DFL GS E S+ A+ F +E M
Sbjct: 375 ISSDPYSRENMIDEVFCGLQEAERLSYIQLLMSRYNHDFLAGSLEVSQKAMGFNLEFMSI 434
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
+QKSA+LS+ASVS+FK VF DIQNLVY +ASK+NS LAMLKAGSKGNL++LVQHSMCLG
Sbjct: 435 MQQKSASLSQASVSSFKHVFRDIQNLVYNYASKENSFLAMLKAGSKGNLLKLVQHSMCLG 494
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQ SLVPLSFR+P +LSC AWNNHK K +N+ E GP+IPCAVVENSFL GLNPL
Sbjct: 495 LQQSLVPLSFRMPRRLSCDAWNNHKAHLPFEKAHNVPERPGPYIPCAVVENSFLAGLNPL 554
Query: 13 ECFV 2
ECFV
Sbjct: 555 ECFV 558
>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana tomentosiformis]
Length = 1447
Score = 248 bits (634), Expect = 1e-63
Identities = 125/184 (67%), Positives = 149/184 (80%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
+SSD +SR+NMIDEV CGL++AE +S+I+LLM N DFL GS E S+ A+ F +E M
Sbjct: 611 ISSDPYSRENMIDEVFCGLQEAERLSYIQLLMSRYNHDFLAGSLEVSQKAMGFNLEFMSI 670
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
+QKSA+LS+ASVS+FK VF DIQNLVY +ASK+NS LAMLKAGSKGNL++LVQHSMCLG
Sbjct: 671 MQQKSASLSQASVSSFKHVFRDIQNLVYNYASKENSFLAMLKAGSKGNLLKLVQHSMCLG 730
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQ SLVPLSFR+P +LSC AWNNHK K +N+ E GP+IPCAVVENSFL GLNPL
Sbjct: 731 LQQSLVPLSFRMPRRLSCDAWNNHKAHLPFEKAHNVPERPGPYIPCAVVENSFLAGLNPL 790
Query: 13 ECFV 2
ECFV
Sbjct: 791 ECFV 794
>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana sylvestris]
Length = 1254
Score = 248 bits (632), Expect = 2e-63
Identities = 125/184 (67%), Positives = 148/184 (80%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
+SSD +SR+NMIDEV CGL++AE +S+++LLM N DFL GS E S+ A+ F +E M
Sbjct: 418 ISSDPYSRENMIDEVFCGLQEAERLSYVQLLMTRYNHDFLAGSLEVSQKAMGFDLEFMSI 477
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
QKSA+LS+ASV+AFKQVF DIQNLVY +ASK+NS LAMLKAGSKGNL++LVQHSMCLG
Sbjct: 478 MLQKSASLSQASVTAFKQVFRDIQNLVYNYASKENSFLAMLKAGSKGNLLKLVQHSMCLG 537
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQ SLVPLSFR+P QLSC AWNNHK K +N+ E G +IPCAVVENSFL GLNPL
Sbjct: 538 LQQSLVPLSFRMPRQLSCDAWNNHKAHLPFEKAHNVPERPGSYIPCAVVENSFLAGLNPL 597
Query: 13 ECFV 2
ECFV
Sbjct: 598 ECFV 601
>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Nicotiana
sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
Length = 1447
Score = 248 bits (632), Expect = 2e-63
Identities = 125/184 (67%), Positives = 148/184 (80%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
+SSD +SR+NMIDEV CGL++AE +S+++LLM N DFL GS E S+ A+ F +E M
Sbjct: 611 ISSDPYSRENMIDEVFCGLQEAERLSYVQLLMTRYNHDFLAGSLEVSQKAMGFDLEFMSI 670
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
QKSA+LS+ASV+AFKQVF DIQNLVY +ASK+NS LAMLKAGSKGNL++LVQHSMCLG
Sbjct: 671 MLQKSASLSQASVTAFKQVFRDIQNLVYNYASKENSFLAMLKAGSKGNLLKLVQHSMCLG 730
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQ SLVPLSFR+P QLSC AWNNHK K +N+ E G +IPCAVVENSFL GLNPL
Sbjct: 731 LQQSLVPLSFRMPRQLSCDAWNNHKAHLPFEKAHNVPERPGSYIPCAVVENSFLAGLNPL 790
Query: 13 ECFV 2
ECFV
Sbjct: 791 ECFV 794
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 243 bits (620), Expect = 4e-62
Identities = 122/184 (66%), Positives = 151/184 (82%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
+SSDS+SR+NMIDEV GL++AE +S+I+LLM+ N+DFL GS EES++++ F E M
Sbjct: 402 ISSDSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFEFMSI 461
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
+QKSA+LS+AS SAFK+VF DIQNLVY +AS DNSLLAMLKAGSKGNL++LVQHSMCLG
Sbjct: 462 MQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHSMCLG 521
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQ SLVP+SFR+P QLSC AWNNHK+ K + + EC G +IP AVV++SFL GLNPL
Sbjct: 522 LQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPL 581
Query: 13 ECFV 2
ECFV
Sbjct: 582 ECFV 585
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 243 bits (620), Expect = 4e-62
Identities = 122/184 (66%), Positives = 151/184 (82%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
+SSDS+SR+NMIDEV GL++AE +S+I+LLM+ N+DFL GS EES++++ F E M
Sbjct: 615 ISSDSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFEFMSI 674
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
+QKSA+LS+AS SAFK+VF DIQNLVY +AS DNSLLAMLKAGSKGNL++LVQHSMCLG
Sbjct: 675 MQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHSMCLG 734
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQ SLVP+SFR+P QLSC AWNNHK+ K + + EC G +IP AVV++SFL GLNPL
Sbjct: 735 LQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPL 794
Query: 13 ECFV 2
ECFV
Sbjct: 795 ECFV 798
>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
[Gossypium raimondii]
Length = 1300
Score = 241 bits (614), Expect = 2e-61
Identities = 120/184 (65%), Positives = 147/184 (79%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
LS D+ S+KNM+DE+ GL++AE + K LMVDS +DFL G+ EE+ + VE+MCY
Sbjct: 643 LSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQMCY 702
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
EKQ+SAALS+ASV +FKQVF DIQNL+Y++A+KDNSL M KAGSKGNL++LVQHSMCLG
Sbjct: 703 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLG 762
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQHSLVPLSFR PHQLSCAAWNN K+ T K ++ E A +IP AVVE+SF+ GLNPL
Sbjct: 763 LQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPL 822
Query: 13 ECFV 2
ECFV
Sbjct: 823 ECFV 826
>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Gossypium raimondii]
Length = 1340
Score = 241 bits (614), Expect = 2e-61
Identities = 120/184 (65%), Positives = 147/184 (79%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
LS D+ S+KNM+DE+ GL++AE + K LMVDS +DFL G+ EE+ + VE+MCY
Sbjct: 502 LSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQMCY 561
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
EKQ+SAALS+ASV +FKQVF DIQNL+Y++A+KDNSL M KAGSKGNL++LVQHSMCLG
Sbjct: 562 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLG 621
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQHSLVPLSFR PHQLSCAAWNN K+ T K ++ E A +IP AVVE+SF+ GLNPL
Sbjct: 622 LQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPL 681
Query: 13 ECFV 2
ECFV
Sbjct: 682 ECFV 685
>gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
Length = 1478
Score = 241 bits (614), Expect = 2e-61
Identities = 120/184 (65%), Positives = 147/184 (79%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
LS D+ S+KNM+DE+ GL++AE + K LMVDS +DFL G+ EE+ + VE+MCY
Sbjct: 640 LSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQMCY 699
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
EKQ+SAALS+ASV +FKQVF DIQNL+Y++A+KDNSL M KAGSKGNL++LVQHSMCLG
Sbjct: 700 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLG 759
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQHSLVPLSFR PHQLSCAAWNN K+ T K ++ E A +IP AVVE+SF+ GLNPL
Sbjct: 760 LQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPL 819
Query: 13 ECFV 2
ECFV
Sbjct: 820 ECFV 823
>ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Gossypium raimondii] gi|823152441|ref|XP_012476046.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X1 [Gossypium raimondii]
gi|763758424|gb|KJB25755.1| hypothetical protein
B456_004G207300 [Gossypium raimondii]
gi|763758426|gb|KJB25757.1| hypothetical protein
B456_004G207300 [Gossypium raimondii]
Length = 1481
Score = 241 bits (614), Expect = 2e-61
Identities = 120/184 (65%), Positives = 147/184 (79%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
LS D+ S+KNM+DE+ GL++AE + K LMVDS +DFL G+ EE+ + VE+MCY
Sbjct: 643 LSPDTDSQKNMMDEIFYGLQEAEQTCNFKQLMVDSCQDFLAGNDEETNRFMVLDVEQMCY 702
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
EKQ+SAALS+ASV +FKQVF DIQNL+Y++A+KDNSL M KAGSKGNL++LVQHSMCLG
Sbjct: 703 EKQRSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLG 762
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQHSLVPLSFR PHQLSCAAWNN K+ T K ++ E A +IP AVVE+SF+ GLNPL
Sbjct: 763 LQHSLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPL 822
Query: 13 ECFV 2
ECFV
Sbjct: 823 ECFV 826
>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
vinifera]
Length = 1354
Score = 239 bits (611), Expect = 5e-61
Identities = 125/184 (67%), Positives = 146/184 (79%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
LSSDS SRKNMIDEV CGL AE H K L+VDS+++FL+GSGE +++ V V+ + Y
Sbjct: 523 LSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWY 582
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
E+Q SAAL ++SV AFKQ F DIQNLVYQ+A+KDNSLLAMLKAGSKGNL++LVQ +CLG
Sbjct: 583 ERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLG 642
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQHSLVPLSF+IPHQLSCAAWN K P N+ SE A +IP AVVENSFL GLNPL
Sbjct: 643 LQHSLVPLSFKIPHQLSCAAWNKQKVPGLI--QNDTSEYAESYIPYAVVENSFLMGLNPL 700
Query: 13 ECFV 2
ECFV
Sbjct: 701 ECFV 704
>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
vinifera]
Length = 1458
Score = 239 bits (611), Expect = 5e-61
Identities = 125/184 (67%), Positives = 146/184 (79%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
LSSDS SRKNMIDEV CGL AE H K L+VDS+++FL+GSGE +++ V V+ + Y
Sbjct: 629 LSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWY 688
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
E+Q SAAL ++SV AFKQ F DIQNLVYQ+A+KDNSLLAMLKAGSKGNL++LVQ +CLG
Sbjct: 689 ERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLG 748
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQHSLVPLSF+IPHQLSCAAWN K P N+ SE A +IP AVVENSFL GLNPL
Sbjct: 749 LQHSLVPLSFKIPHQLSCAAWNKQKVPGLI--QNDTSEYAESYIPYAVVENSFLMGLNPL 806
Query: 13 ECFV 2
ECFV
Sbjct: 807 ECFV 810
>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
vinifera]
Length = 1460
Score = 239 bits (611), Expect = 5e-61
Identities = 125/184 (67%), Positives = 146/184 (79%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
LSSDS SRKNMIDEV CGL AE H K L+VDS+++FL+GSGE +++ V V+ + Y
Sbjct: 629 LSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWY 688
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
E+Q SAAL ++SV AFKQ F DIQNLVYQ+A+KDNSLLAMLKAGSKGNL++LVQ +CLG
Sbjct: 689 ERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLG 748
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQHSLVPLSF+IPHQLSCAAWN K P N+ SE A +IP AVVENSFL GLNPL
Sbjct: 749 LQHSLVPLSFKIPHQLSCAAWNKQKVPGLI--QNDTSEYAESYIPYAVVENSFLMGLNPL 806
Query: 13 ECFV 2
ECFV
Sbjct: 807 ECFV 810
>ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Solanum lycopersicum]
Length = 1307
Score = 239 bits (611), Expect = 5e-61
Identities = 119/184 (64%), Positives = 151/184 (82%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
+S+DS+SR+NMIDEV GL++AE +S+I+LLM+ N+DFL G+ EES++++ F E M
Sbjct: 476 ISADSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSI 535
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
+QKSA+LS+AS SAFK+VF DIQNLVY +AS DNSLLAMLKAGSKGNL++LVQH+MCLG
Sbjct: 536 MQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLG 595
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQ SLVP+SFR+P QLSC AWNNHK+ K + + EC G +IP AVV++SFL GLNPL
Sbjct: 596 LQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPL 655
Query: 13 ECFV 2
ECFV
Sbjct: 656 ECFV 659
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 239 bits (611), Expect = 5e-61
Identities = 125/184 (67%), Positives = 146/184 (79%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
LSSDS SRKNMIDEV CGL AE H K L+VDS+++FL+GSGE +++ V V+ + Y
Sbjct: 531 LSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWY 590
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
E+Q SAAL ++SV AFKQ F DIQNLVYQ+A+KDNSLLAMLKAGSKGNL++LVQ +CLG
Sbjct: 591 ERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLG 650
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQHSLVPLSF+IPHQLSCAAWN K P N+ SE A +IP AVVENSFL GLNPL
Sbjct: 651 LQHSLVPLSFKIPHQLSCAAWNKQKVPGLI--QNDTSEYAESYIPYAVVENSFLMGLNPL 708
Query: 13 ECFV 2
ECFV
Sbjct: 709 ECFV 712
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum lycopersicum] gi|723724576|ref|XP_010325435.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Solanum lycopersicum]
Length = 1446
Score = 239 bits (611), Expect = 5e-61
Identities = 119/184 (64%), Positives = 151/184 (82%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
+S+DS+SR+NMIDEV GL++AE +S+I+LLM+ N+DFL G+ EES++++ F E M
Sbjct: 615 ISADSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSI 674
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
+QKSA+LS+AS SAFK+VF DIQNLVY +AS DNSLLAMLKAGSKGNL++LVQH+MCLG
Sbjct: 675 MQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLG 734
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQ SLVP+SFR+P QLSC AWNNHK+ K + + EC G +IP AVV++SFL GLNPL
Sbjct: 735 LQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPL 794
Query: 13 ECFV 2
ECFV
Sbjct: 795 ECFV 798
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 239 bits (611), Expect = 5e-61
Identities = 125/184 (67%), Positives = 146/184 (79%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
LSSDS SRKNMIDEV CGL AE H K L+VDS+++FL+GSGE +++ V V+ + Y
Sbjct: 632 LSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWY 691
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
E+Q SAAL ++SV AFKQ F DIQNLVYQ+A+KDNSLLAMLKAGSKGNL++LVQ +CLG
Sbjct: 692 ERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLG 751
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQHSLVPLSF+IPHQLSCAAWN K P N+ SE A +IP AVVENSFL GLNPL
Sbjct: 752 LQHSLVPLSFKIPHQLSCAAWNKQKVPGLI--QNDTSEYAESYIPYAVVENSFLMGLNPL 809
Query: 13 ECFV 2
ECFV
Sbjct: 810 ECFV 813
>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1138
Score = 239 bits (611), Expect = 5e-61
Identities = 119/184 (64%), Positives = 151/184 (82%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMCY 374
+S+DS+SR+NMIDEV GL++AE +S+I+LLM+ N+DFL G+ EES++++ F E M
Sbjct: 307 ISADSYSRENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSI 366
Query: 373 EKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCLG 194
+QKSA+LS+AS SAFK+VF DIQNLVY +AS DNSLLAMLKAGSKGNL++LVQH+MCLG
Sbjct: 367 MQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLG 426
Query: 193 LQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNPL 14
LQ SLVP+SFR+P QLSC AWNNHK+ K + + EC G +IP AVV++SFL GLNPL
Sbjct: 427 LQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPL 486
Query: 13 ECFV 2
ECFV
Sbjct: 487 ECFV 490
>emb|CDP09818.1| unnamed protein product [Coffea canephora]
Length = 1511
Score = 236 bits (602), Expect = 5e-60
Identities = 118/185 (63%), Positives = 152/185 (82%), Gaps = 1/185 (0%)
Frame = -1
Query: 553 LSSDSHSRKNMIDEVSCGLRQAELISHIKLLMVDSNRDFLVGSGEESESAVDFGVERMC- 377
L+SD++SR+NMI+EVSCGL++AEL+S I+LLM+ SN+DFLV S E ++ +VDFG + +
Sbjct: 668 LTSDAYSRQNMIEEVSCGLQEAELLSSIRLLMMGSNQDFLVESTEANKRSVDFGEQHLSS 727
Query: 376 YEKQKSAALSRASVSAFKQVFWDIQNLVYQFASKDNSLLAMLKAGSKGNLMRLVQHSMCL 197
++Q S+ LS ASVSAFKQVF D+Q+LVY + SKDNS L+ML AGSKGNL++LVQHSMCL
Sbjct: 728 IQQQNSSVLSEASVSAFKQVFLDVQHLVYHYVSKDNSFLSMLMAGSKGNLLKLVQHSMCL 787
Query: 196 GLQHSLVPLSFRIPHQLSCAAWNNHKTPASTWKTNNISECAGPFIPCAVVENSFLTGLNP 17
GLQHS+VPLSF IPHQLSCA WN HK S +++ + +G +IP AV+ENSFLTGLNP
Sbjct: 788 GLQHSVVPLSFSIPHQLSCATWNYHK--ISVHESHGTLDHSGSYIPFAVIENSFLTGLNP 845
Query: 16 LECFV 2
+ECFV
Sbjct: 846 MECFV 850