BLASTX nr result
ID: Cornus23_contig00030399
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00030399
(312 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu... 74 8e-21
ref|XP_010652654.1| PREDICTED: upstream activation factor subuni... 69 8e-20
emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera] 69 8e-20
ref|XP_012079173.1| PREDICTED: upstream activation factor subuni... 70 3e-19
ref|XP_010255131.1| PREDICTED: upstream activation factor subuni... 71 3e-19
ref|XP_009629951.1| PREDICTED: upstream activation factor subuni... 73 4e-19
ref|XP_009774095.1| PREDICTED: upstream activation factor subuni... 73 4e-19
ref|XP_009629952.1| PREDICTED: upstream activation factor subuni... 73 4e-19
ref|XP_009774096.1| PREDICTED: upstream activation factor subuni... 73 4e-19
ref|XP_009629953.1| PREDICTED: upstream activation factor subuni... 73 4e-19
ref|XP_009774097.1| PREDICTED: upstream activation factor subuni... 73 4e-19
gb|KDO79317.1| hypothetical protein CISIN_1g0196442mg, partial [... 68 4e-19
ref|XP_002306454.2| hypothetical protein POPTR_0005s14110g [Popu... 71 7e-19
ref|XP_010263744.1| PREDICTED: upstream activation factor subuni... 67 9e-19
ref|XP_010263746.1| PREDICTED: upstream activation factor subuni... 67 9e-19
emb|CDP02467.1| unnamed protein product [Coffea canephora] 70 9e-19
ref|XP_007042350.1| SWIB complex BAF60b domain-containing protei... 70 1e-18
ref|XP_010096161.1| Upstream activation factor subunit spp27 [Mo... 67 1e-18
ref|XP_011009270.1| PREDICTED: protein TRI1-like [Populus euphra... 71 2e-18
ref|XP_004511971.1| PREDICTED: upstream activation factor subuni... 66 2e-18
>ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis] gi|223538407|gb|EEF40013.1| Upstream
activation factor subunit UAF30, putative [Ricinus
communis]
Length = 322
Score = 73.9 bits (180), Expect(2) = 8e-21
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP +LSDA++KFFGT E+ALSRAD +KR+W+YIK+NNLQ
Sbjct: 241 SGFLAPLQLSDALIKFFGTGENALSRADVIKRMWEYIKQNNLQ 283
Score = 53.1 bits (126), Expect(2) = 8e-21
Identities = 25/28 (89%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSDKR I+CDEKLKELFDVD+FNGFTV
Sbjct: 284 DPSDKRRIICDEKLKELFDVDTFNGFTV 311
>ref|XP_010652654.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis
vinifera]
Length = 332
Score = 69.3 bits (168), Expect(2) = 8e-20
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +2
Query: 2 NSGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
NSGFLAP LSDA+VKF ESALSRA+ VK+IW+YIK+NNLQ
Sbjct: 248 NSGFLAPLPLSDALVKFLNIEESALSRAEVVKKIWEYIKQNNLQ 291
Score = 54.3 bits (129), Expect(2) = 8e-20
Identities = 26/28 (92%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSDKR I+CDEKLKELFDVDSFNGFTV
Sbjct: 292 DPSDKRRIICDEKLKELFDVDSFNGFTV 319
>emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
Length = 332
Score = 69.3 bits (168), Expect(2) = 8e-20
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +2
Query: 2 NSGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
NSGFLAP LSDA+VKF ESALSRA+ VK+IW+YIK+NNLQ
Sbjct: 248 NSGFLAPLPLSDALVKFLNIEESALSRAEVVKKIWEYIKQNNLQ 291
Score = 54.3 bits (129), Expect(2) = 8e-20
Identities = 26/28 (92%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSDKR I+CDEKLKELFDVDSFNGFTV
Sbjct: 292 DPSDKRRIICDEKLKELFDVDSFNGFTV 319
>ref|XP_012079173.1| PREDICTED: upstream activation factor subunit spp27-like [Jatropha
curcas] gi|643722005|gb|KDP31884.1| hypothetical protein
JCGZ_12345 [Jatropha curcas]
Length = 334
Score = 70.5 bits (171), Expect(2) = 3e-19
Identities = 31/43 (72%), Positives = 39/43 (90%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP +LSDA++KF GT E+ALSRA+ VKR+W+YIK+NNLQ
Sbjct: 253 SGFLAPLQLSDALIKFLGTGENALSRAEVVKRMWEYIKQNNLQ 295
Score = 51.2 bits (121), Expect(2) = 3e-19
Identities = 24/29 (82%), Positives = 27/29 (93%), Gaps = 1/29 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTVA 216
DPSDKR I+CDEKLK+LFDVD FNGFTV+
Sbjct: 296 DPSDKRRIICDEKLKQLFDVDFFNGFTVS 324
>ref|XP_010255131.1| PREDICTED: upstream activation factor subunit spp27-like [Nelumbo
nucifera]
Length = 323
Score = 70.9 bits (172), Expect(2) = 3e-19
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +2
Query: 2 NSGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
NSGFLAP LSDA+VKF GT ES+LSRA VKR+W+YIK+NNLQ
Sbjct: 239 NSGFLAPLPLSDALVKFLGTGESSLSRAGVVKRMWEYIKQNNLQ 282
Score = 50.8 bits (120), Expect(2) = 3e-19
Identities = 24/28 (85%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSDKR I+CDEKLKELF+VDSF+GFTV
Sbjct: 283 DPSDKRRIICDEKLKELFEVDSFHGFTV 310
>ref|XP_009629951.1| PREDICTED: upstream activation factor subunit spp27-like isoform X1
[Nicotiana tomentosiformis]
Length = 329
Score = 73.2 bits (178), Expect(2) = 4e-19
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP RLSDA+VKFFG E AL+RAD +KRIWQYIKEN LQ
Sbjct: 246 SGFLAPVRLSDALVKFFGNGEKALTRADVIKRIWQYIKENELQ 288
Score = 48.1 bits (113), Expect(2) = 4e-19
Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTVA--*RAKFVRR 240
DPSDK+ I+CDE+LKELF VDSF+GFTV A F++R
Sbjct: 289 DPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 327
>ref|XP_009774095.1| PREDICTED: upstream activation factor subunit spp27-like isoform X1
[Nicotiana sylvestris]
Length = 328
Score = 73.2 bits (178), Expect(2) = 4e-19
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP RLSDA+VKFFG E+AL+RAD +KRIWQYIKEN LQ
Sbjct: 245 SGFLAPVRLSDALVKFFGIGENALTRADVIKRIWQYIKENELQ 287
Score = 48.1 bits (113), Expect(2) = 4e-19
Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTVA--*RAKFVRR 240
DPSDK+ I+CDE+LKELF VDSF+GFTV A F++R
Sbjct: 288 DPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 326
>ref|XP_009629952.1| PREDICTED: upstream activation factor subunit spp27-like isoform X2
[Nicotiana tomentosiformis]
Length = 328
Score = 73.2 bits (178), Expect(2) = 4e-19
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP RLSDA+VKFFG E AL+RAD +KRIWQYIKEN LQ
Sbjct: 245 SGFLAPVRLSDALVKFFGNGEKALTRADVIKRIWQYIKENELQ 287
Score = 48.1 bits (113), Expect(2) = 4e-19
Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTVA--*RAKFVRR 240
DPSDK+ I+CDE+LKELF VDSF+GFTV A F++R
Sbjct: 288 DPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 326
>ref|XP_009774096.1| PREDICTED: upstream activation factor subunit spp27-like isoform X2
[Nicotiana sylvestris]
Length = 327
Score = 73.2 bits (178), Expect(2) = 4e-19
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP RLSDA+VKFFG E+AL+RAD +KRIWQYIKEN LQ
Sbjct: 244 SGFLAPVRLSDALVKFFGIGENALTRADVIKRIWQYIKENELQ 286
Score = 48.1 bits (113), Expect(2) = 4e-19
Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTVA--*RAKFVRR 240
DPSDK+ I+CDE+LKELF VDSF+GFTV A F++R
Sbjct: 287 DPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 325
>ref|XP_009629953.1| PREDICTED: upstream activation factor subunit spp27-like isoform X3
[Nicotiana tomentosiformis]
Length = 321
Score = 73.2 bits (178), Expect(2) = 4e-19
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP RLSDA+VKFFG E AL+RAD +KRIWQYIKEN LQ
Sbjct: 238 SGFLAPVRLSDALVKFFGNGEKALTRADVIKRIWQYIKENELQ 280
Score = 48.1 bits (113), Expect(2) = 4e-19
Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTVA--*RAKFVRR 240
DPSDK+ I+CDE+LKELF VDSF+GFTV A F++R
Sbjct: 281 DPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 319
>ref|XP_009774097.1| PREDICTED: upstream activation factor subunit spp27-like isoform X3
[Nicotiana sylvestris]
Length = 320
Score = 73.2 bits (178), Expect(2) = 4e-19
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP RLSDA+VKFFG E+AL+RAD +KRIWQYIKEN LQ
Sbjct: 237 SGFLAPVRLSDALVKFFGIGENALTRADVIKRIWQYIKENELQ 279
Score = 48.1 bits (113), Expect(2) = 4e-19
Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 3/39 (7%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTVA--*RAKFVRR 240
DPSDK+ I+CDE+LKELF VDSF+GFTV A F++R
Sbjct: 280 DPSDKKTIICDERLKELFQVDSFHGFTVTKLLTAHFIKR 318
>gb|KDO79317.1| hypothetical protein CISIN_1g0196442mg, partial [Citrus sinensis]
Length = 213
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP +LSDA++KF GT ESAL R+D +KR+W YIKE NLQ
Sbjct: 132 SGFLAPLQLSDALIKFLGTGESALPRSDVIKRMWDYIKEKNLQ 174
Score = 53.5 bits (127), Expect(2) = 4e-19
Identities = 26/32 (81%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
Frame = +1
Query: 121 KQPADPSDKR-ILCDEKLKELFDVDSFNGFTV 213
K DPSDKR I+CDEKLKELFDVD+FNGFTV
Sbjct: 171 KNLQDPSDKRRIICDEKLKELFDVDTFNGFTV 202
>ref|XP_002306454.2| hypothetical protein POPTR_0005s14110g [Populus trichocarpa]
gi|550338891|gb|EEE93450.2| hypothetical protein
POPTR_0005s14110g [Populus trichocarpa]
Length = 316
Score = 70.9 bits (172), Expect(2) = 7e-19
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +2
Query: 2 NSGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
NSGFLAP +LSDA+ KF GT ES LSR+D VKR+W+YIK+NNLQ
Sbjct: 234 NSGFLAPLQLSDALKKFLGTGESTLSRSDVVKRMWEYIKQNNLQ 277
Score = 49.7 bits (117), Expect(2) = 7e-19
Identities = 24/28 (85%), Positives = 25/28 (89%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSDKR ILCD KLKELFD+DSF GFTV
Sbjct: 278 DPSDKRRILCDVKLKELFDIDSFTGFTV 305
>ref|XP_010263744.1| PREDICTED: upstream activation factor subunit spp27-like isoform X3
[Nelumbo nucifera] gi|720024786|ref|XP_010263745.1|
PREDICTED: upstream activation factor subunit spp27-like
isoform X3 [Nelumbo nucifera]
Length = 329
Score = 67.4 bits (163), Expect(2) = 9e-19
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +2
Query: 2 NSGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
NSGFLAP LS A+VKF GT E++LSRA VKR+W+YIK+NNLQ
Sbjct: 247 NSGFLAPLPLSGALVKFLGTGENSLSRASVVKRMWEYIKQNNLQ 290
Score = 52.8 bits (125), Expect(2) = 9e-19
Identities = 25/28 (89%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSDKR I+CDEKLKELF+VDSFNGFTV
Sbjct: 291 DPSDKRRIICDEKLKELFEVDSFNGFTV 318
>ref|XP_010263746.1| PREDICTED: upstream activation factor subunit spp27-like isoform X4
[Nelumbo nucifera]
Length = 328
Score = 67.4 bits (163), Expect(2) = 9e-19
Identities = 31/44 (70%), Positives = 37/44 (84%)
Frame = +2
Query: 2 NSGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
NSGFLAP LS A+VKF GT E++LSRA VKR+W+YIK+NNLQ
Sbjct: 246 NSGFLAPLPLSGALVKFLGTGENSLSRASVVKRMWEYIKQNNLQ 289
Score = 52.8 bits (125), Expect(2) = 9e-19
Identities = 25/28 (89%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSDKR I+CDEKLKELF+VDSFNGFTV
Sbjct: 290 DPSDKRRIICDEKLKELFEVDSFNGFTV 317
>emb|CDP02467.1| unnamed protein product [Coffea canephora]
Length = 323
Score = 69.7 bits (169), Expect(2) = 9e-19
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP LSDA+VKF GT ESAL R+D VKRIW YIK+NNLQ
Sbjct: 240 SGFLAPLPLSDALVKFLGTGESALPRSDVVKRIWDYIKQNNLQ 282
Score = 50.4 bits (119), Expect(2) = 9e-19
Identities = 24/28 (85%), Positives = 26/28 (92%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSD+R ILCDEKLKELFDVD+F GFTV
Sbjct: 283 DPSDRRRILCDEKLKELFDVDNFQGFTV 310
>ref|XP_007042350.1| SWIB complex BAF60b domain-containing protein, putative [Theobroma
cacao] gi|508706285|gb|EOX98181.1| SWIB complex BAF60b
domain-containing protein, putative [Theobroma cacao]
Length = 472
Score = 69.7 bits (169), Expect(2) = 1e-18
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGFLAP LSDA+V FFGT E+ALSRAD VKR+W+YIK+N+LQ
Sbjct: 389 SGFLAPLPLSDALVNFFGTGENALSRADVVKRMWEYIKQNDLQ 431
Score = 49.7 bits (117), Expect(2) = 1e-18
Identities = 23/28 (82%), Positives = 26/28 (92%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSDKR ILCD+KLKEL +VDSFNGFT+
Sbjct: 432 DPSDKRRILCDDKLKELLEVDSFNGFTI 459
>ref|XP_010096161.1| Upstream activation factor subunit spp27 [Morus notabilis]
gi|587874418|gb|EXB63556.1| Upstream activation factor
subunit spp27 [Morus notabilis]
Length = 463
Score = 67.0 bits (162), Expect(2) = 1e-18
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +2
Query: 5 SGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
SGF AP LSDA+VKF GT E+ LSRAD VKR+WQYIK+N+LQ
Sbjct: 381 SGFTAPLPLSDALVKFIGTGENTLSRADVVKRMWQYIKQNDLQ 423
Score = 52.4 bits (124), Expect(2) = 1e-18
Identities = 25/28 (89%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSDKR ILCD+KLKELFDVDSFNGF+V
Sbjct: 424 DPSDKRRILCDDKLKELFDVDSFNGFSV 451
>ref|XP_011009270.1| PREDICTED: protein TRI1-like [Populus euphratica]
Length = 316
Score = 70.9 bits (172), Expect(2) = 2e-18
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +2
Query: 2 NSGFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
NSGFLAP +LSDA+ KF GT ES LSR+D VKR+W+YIK+NNLQ
Sbjct: 234 NSGFLAPLQLSDALKKFLGTGESTLSRSDVVKRMWEYIKQNNLQ 277
Score = 48.1 bits (113), Expect(2) = 2e-18
Identities = 23/28 (82%), Positives = 25/28 (89%), Gaps = 1/28 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTV 213
DPSDKR ILCD KLKELF++DSF GFTV
Sbjct: 278 DPSDKRRILCDVKLKELFEIDSFTGFTV 305
>ref|XP_004511971.1| PREDICTED: upstream activation factor subunit spp27 isoform X1
[Cicer arietinum]
Length = 352
Score = 66.2 bits (160), Expect(2) = 2e-18
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2
Query: 8 GFLAPFRLSDAIVKFFGTRESALSRADTVKRIWQYIKENNLQ 133
GFLAP +LSDA+VKF GT ES LSR+D +KR+W YIK NNLQ
Sbjct: 270 GFLAPLQLSDALVKFLGTGESELSRSDVIKRMWDYIKGNNLQ 311
Score = 52.4 bits (124), Expect(2) = 2e-18
Identities = 24/29 (82%), Positives = 27/29 (93%), Gaps = 1/29 (3%)
Frame = +1
Query: 133 DPSDKR-ILCDEKLKELFDVDSFNGFTVA 216
DPSDKR +LCDEKLKELFD+DSF GFTV+
Sbjct: 312 DPSDKRNVLCDEKLKELFDIDSFTGFTVS 340