BLASTX nr result

ID: Cornus23_contig00030380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00030380
         (326 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32576.3| unnamed protein product [Vitis vinifera]               89   1e-15
ref|XP_003631607.1| PREDICTED: SWI/SNF complex subunit SWI3D [Vi...    89   1e-15
emb|CAN61314.1| hypothetical protein VITISV_013389 [Vitis vinifera]    83   9e-14
ref|XP_004230866.1| PREDICTED: SWI/SNF complex subunit SWI3D [So...    71   3e-10
ref|XP_006365090.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    69   1e-09
ref|XP_009760996.1| PREDICTED: SWI/SNF complex subunit SWI3D [Ni...    64   3e-08
ref|XP_012837035.1| PREDICTED: SWI/SNF complex subunit SWI3D [Er...    64   4e-08
emb|CDO97064.1| unnamed protein product [Coffea canephora]             62   2e-07
ref|XP_009589593.1| PREDICTED: SWI/SNF complex subunit SWI3D [Ni...    61   4e-07
ref|XP_007042219.1| Chromatin remodeling complex subunit, putati...    57   5e-06

>emb|CBI32576.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 51/113 (45%), Positives = 76/113 (67%), Gaps = 6/113 (5%)
 Frame = -3

Query: 321  REPNIVDTSEEVAPVLLNESDNADLSKDQAPSAKEESNDLISKDELLPSSVKES--EASG 148
            +EP++V  S +  P +L++S N+DL KD  P++ ++S+DL  K  LLPSS+KES   AS 
Sbjct: 695  KEPDVV-VSNDSEPGILSQSSNSDLPKDCPPNSVDKSDDLTPKAGLLPSSMKESGDGASV 753

Query: 147  CESSQCAEAPKDADAV----PLENEEPKELATSNSMVENGANKGEKEAQDSKN 1
             + SQ +EAPKD D V    PL+ +EP +  TSN++VENGAN G  + ++ K+
Sbjct: 754  KDHSQPSEAPKDVDTVPESLPLQTKEPLQSLTSNTLVENGANTGRDQTKEGKS 806


>ref|XP_003631607.1| PREDICTED: SWI/SNF complex subunit SWI3D [Vitis vinifera]
          Length = 1012

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 51/113 (45%), Positives = 76/113 (67%), Gaps = 6/113 (5%)
 Frame = -3

Query: 321  REPNIVDTSEEVAPVLLNESDNADLSKDQAPSAKEESNDLISKDELLPSSVKES--EASG 148
            +EP++V  S +  P +L++S N+DL KD  P++ ++S+DL  K  LLPSS+KES   AS 
Sbjct: 724  KEPDVV-VSNDSEPGILSQSSNSDLPKDCPPNSVDKSDDLTPKAGLLPSSMKESGDGASV 782

Query: 147  CESSQCAEAPKDADAV----PLENEEPKELATSNSMVENGANKGEKEAQDSKN 1
             + SQ +EAPKD D V    PL+ +EP +  TSN++VENGAN G  + ++ K+
Sbjct: 783  KDHSQPSEAPKDVDTVPESLPLQTKEPLQSLTSNTLVENGANTGRDQTKEGKS 835


>emb|CAN61314.1| hypothetical protein VITISV_013389 [Vitis vinifera]
          Length = 844

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
 Frame = -3

Query: 321 REPNIVDTSEEVAPVLLNESDNADLSKDQAPSAKEESNDLISKDELLPSSVKES--EASG 148
           +EP++V  S +  P +L++S N+DL  D  P++ ++S+DL  K  LLPSS+KES   AS 
Sbjct: 546 KEPDVV-VSNDSEPGILSQSSNSDLPXDCPPNSVDKSDDLTPKAGLLPSSMKESGDGASV 604

Query: 147 CESSQCAEAPKDADAV----PLENEEPKELATSNSMVENGANKG 28
            + SQ +EAPKD D V    PL+ +EP +  TSN++VENGAN G
Sbjct: 605 KDHSQPSEAPKDVDTVPESLPLQTKEPLQSLTSNTLVENGANTG 648


>ref|XP_004230866.1| PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum]
          Length = 945

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
 Frame = -3

Query: 321 REPNIVDTSEEVAPVLLNESDNADLSKDQAPSAKEESNDLISKDELLPSSVKESEASGCE 142
           ++ + + T +E  P  L ESD+ADL+  Q PS   ES+ L SK EL P   KES      
Sbjct: 674 KQSDPIPTDKEGEPASLKESDDADLAVGQTPSTTAESDVLTSKLELPPGFEKESVDGALM 733

Query: 141 S--SQCAEAPKDADAVP-LENEEPKELATSNSMVENGANKGEKEAQDS 7
           +  S   + PKD D +P ++ +EP++   SNS++ENG N G  E +DS
Sbjct: 734 TIPSDSPDTPKDEDMMPAVQTKEPEQSMKSNSVLENGENTGAGEVKDS 781


>ref|XP_006365090.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Solanum tuberosum]
          Length = 945

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
 Frame = -3

Query: 321 REPNIVDTSEEVAPVLLNESDNADLSKDQAPSAKEESNDLISKDELLPSSVKESEASGCE 142
           ++ + + T +E  P  L ESD+A L+  Q PS   ES+ L SK EL P   KES      
Sbjct: 674 KQSDPIPTEKEGEPASLKESDDAGLAVGQTPSTTAESDVLTSKLELPPGFEKESVDGALT 733

Query: 141 S--SQCAEAPKDADAVP-LENEEPKELATSNSMVENGANKGEKEAQDS 7
           +  S   + PKD D +P ++ +EP++   SNS++ENG N G  E +DS
Sbjct: 734 AIPSDSPDTPKDEDMMPAVQTKEPEQSMKSNSVLENGENTGAGEVKDS 781


>ref|XP_009760996.1| PREDICTED: SWI/SNF complex subunit SWI3D [Nicotiana sylvestris]
          Length = 947

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
 Frame = -3

Query: 321  REPNIVDTSEEVAPVLLNESDNADLSKDQAPSAKEESNDLISKDELLPSSVKES--EASG 148
            ++ + + T ++  P      D+A L+  +APS   ES+DL SK EL P   KES   A  
Sbjct: 678  KQSSQIPTDKDGEPASPKGPDDAGLAVGKAPSTTAESDDLTSKLELPPGFEKESVDRALT 737

Query: 147  CESSQCAEAPKDADAVP-LENEEPKELATSNSMVENGANKGEKEAQDS 7
               S   + PKD D +P ++++EP++ A SN++ EN  N G  EA+DS
Sbjct: 738  AVPSDSPDTPKDEDMMPAVQSKEPEQSAKSNTVAENDENTGAGEAKDS 785


>ref|XP_012837035.1| PREDICTED: SWI/SNF complex subunit SWI3D [Erythranthe guttatus]
            gi|848872954|ref|XP_012837036.1| PREDICTED: SWI/SNF
            complex subunit SWI3D [Erythranthe guttatus]
            gi|604333435|gb|EYU37786.1| hypothetical protein
            MIMGU_mgv1a000855mg [Erythranthe guttata]
          Length = 959

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
 Frame = -3

Query: 324  VREPNIVDTSEEVAPVLLNESDNADLSKDQAPSAKEESNDLISKDELLPSSVKESE---- 157
            ++EPN + T+EE  PV   E  +++L  +Q P   EES    S  EL P +VKESE    
Sbjct: 668  LKEPNGMVTNEETQPVSKTEPSSSNL--EQVPKDGEESLVAASHTELQPDTVKESEGASV 725

Query: 156  -----ASGCESSQCAEAPKDADAVPLENEEPKELATSNSMVENGANKGEKEAQDS 7
                 ASG E+SQ  E  KD   +P+  +E  +++  NS  E   N G+ EA++S
Sbjct: 726  KESEGASGGETSQSKEILKDELMLPIPEKEEADVSIPNSTTEKEENTGDGEAKES 780


>emb|CDO97064.1| unnamed protein product [Coffea canephora]
          Length = 892

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
 Frame = -3

Query: 321 REPNIVDTSEEVAPVLLNESDNADLSKDQAPSAKEESNDLISKDELLPSSVKESE--ASG 148
           +E N   T+EE  P  + ESD  D+ K+Q P+  E+S+DL  + E+ P   KE +  A  
Sbjct: 644 KETNETTTNEESEPTHVIESDKPDIPKEQEPANAEKSDDLAMEVEVPPGFEKEPDDAAPL 703

Query: 147 CESSQCAEAPKDADAVPLENEEPKELATSNSMVENGANKGEKEAQDSK 4
            E S+ A+  KD D   LE ++  EL  SN + EN ANK  K+  D +
Sbjct: 704 GEPSESADVSKDMD---LEMKDRVELTASNLVAENEANKEAKDIIDEE 748


>ref|XP_009589593.1| PREDICTED: SWI/SNF complex subunit SWI3D [Nicotiana
           tomentosiformis]
          Length = 945

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
 Frame = -3

Query: 321 REPNIVDTSEEVAPVLLNESDNADLSKDQAPSAKEESNDLISKDELLPSSVKES--EASG 148
           ++ + + T ++  P      D+A L+  +APS   ES+DL SK EL P   KES   A  
Sbjct: 678 KQSSQIPTDKDEEPASRKGPDDAGLAVGKAPSTTSESDDLTSKLELPPGFEKESVDRALT 737

Query: 147 CESSQCAEAPKDADAVP-LENEEPKELATSNSMVENGANKGEKEAQDS 7
              S   + PKD D +P ++ +EP++ A SN++ EN A  G  EA+DS
Sbjct: 738 AMPSDSPDTPKDEDMMPAVQTKEPEQSAKSNTVAENDAGAG--EAKDS 783


>ref|XP_007042219.1| Chromatin remodeling complex subunit, putative isoform 1 [Theobroma
           cacao] gi|590685881|ref|XP_007042220.1| Chromatin
           remodeling complex subunit, putative isoform 1
           [Theobroma cacao] gi|590685885|ref|XP_007042221.1|
           Chromatin remodeling complex subunit, putative isoform 1
           [Theobroma cacao] gi|508706154|gb|EOX98050.1| Chromatin
           remodeling complex subunit, putative isoform 1
           [Theobroma cacao] gi|508706155|gb|EOX98051.1| Chromatin
           remodeling complex subunit, putative isoform 1
           [Theobroma cacao] gi|508706156|gb|EOX98052.1| Chromatin
           remodeling complex subunit, putative isoform 1
           [Theobroma cacao]
          Length = 1025

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
 Frame = -3

Query: 321 REPNIVDTSEEVAPVLLNESDNADLSKDQAPSAKEESNDLISKDELLPSSVKES---EAS 151
           +EP+ + T+EE     LNES   D SKD  PS  +ES++L S+  L  SSV+E+   E S
Sbjct: 668 KEPDTLTTNEEDKKANLNESSVIDQSKDHQPSLMKESDNLASQVSL--SSVEETGGKETS 725

Query: 150 GCESSQCAEAPKD---ADAVPLENEEPKELATSNSMVE 46
             E SQ  EA K+    D+VPLE  EP + A S  + E
Sbjct: 726 VEEPSQPTEAVKEVDMTDSVPLEKNEPCDAAVSKPVGE 763


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