BLASTX nr result

ID: Cornus23_contig00030378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00030378
         (305 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007038597.1| Retrotransposon, unclassified-like protein [...    63   8e-08
ref|XP_007032383.1| H0502G05.11 protein [Theobroma cacao] gi|508...    63   8e-08
ref|XP_007044604.1| H0502G05.11 protein [Theobroma cacao] gi|508...    61   3e-07

>ref|XP_007038597.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
           gi|508775842|gb|EOY23098.1| Retrotransposon,
           unclassified-like protein [Theobroma cacao]
          Length = 1609

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 24/57 (42%), Positives = 38/57 (66%)
 Frame = +1

Query: 10  PTAEDERSPKFCLYHRHTRHPTYDCWALRNIFQKRIMRGELILGNQDVRADPFPNHP 180
           PT E++ +P++C YHR   HP  +C  LR +F +R+  GE+++GN  V+ +P P HP
Sbjct: 407 PTTEEKANPRYCDYHRTVGHPLAECRNLRRMFHRRVQAGEVLIGNNRVQNNPLPIHP 463


>ref|XP_007032383.1| H0502G05.11 protein [Theobroma cacao] gi|508711412|gb|EOY03309.1|
           H0502G05.11 protein [Theobroma cacao]
          Length = 1352

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 24/57 (42%), Positives = 39/57 (68%)
 Frame = +1

Query: 10  PTAEDERSPKFCLYHRHTRHPTYDCWALRNIFQKRIMRGELILGNQDVRADPFPNHP 180
           PTA+++ +P++C YHR   HP  +C  LR +F +R+  GE+++GN  V+ +P P HP
Sbjct: 372 PTAKEKANPRYCDYHRTVGHPLAECRNLRRMFHRRVQAGEVLIGNNRVQNNPLPIHP 428


>ref|XP_007044604.1| H0502G05.11 protein [Theobroma cacao] gi|508708539|gb|EOY00436.1|
           H0502G05.11 protein [Theobroma cacao]
          Length = 537

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = +1

Query: 10  PTAEDERSPKFCLYHRHTRHPTYDCWALRNIFQKRIMRGELILGNQDVRADPFPNHP 180
           PT E++ +P++C YHR   HP  +C  LR +F +++  GE+++GN  V+ +P P HP
Sbjct: 407 PTTEEKANPRYCDYHRTVGHPLAECRNLRRMFHQQVQAGEVLIGNNRVQNNPLPIHP 463


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