BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00030293
         (276 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18448.3| unnamed protein product [Vitis vinifera]              102   6e-27
ref|XP_002267010.1| PREDICTED: RNA pseudouridine synthase 3, mit...   102   6e-27
ref|XP_010263262.1| PREDICTED: RNA pseudouridine synthase 3, mit...    94   7e-25
gb|KGN63094.1| hypothetical protein Csa_2G402020 [Cucumis sativus]     95   2e-22
ref|XP_011649894.1| PREDICTED: RNA pseudouridine synthase 3, mit...    95   2e-22
ref|XP_011649895.1| PREDICTED: RNA pseudouridine synthase 3, mit...    95   2e-22
ref|XP_008361299.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...    88   7e-22
ref|XP_008441208.1| PREDICTED: RNA pseudouridine synthase 3, mit...    97   9e-22
ref|XP_012853147.1| PREDICTED: RNA pseudouridine synthase 3, mit...    86   2e-21
ref|XP_012840385.1| PREDICTED: RNA pseudouridine synthase 3, mit...    86   2e-21
ref|XP_009358613.1| PREDICTED: RNA pseudouridine synthase 3, mit...    87   2e-21
gb|EYU34909.1| hypothetical protein MIMGU_mgv1a006040mg [Erythra...    86   2e-21
ref|XP_007023655.1| Pseudouridine synthase family protein [Theob...    86   2e-21
ref|XP_009620200.1| PREDICTED: RNA pseudouridine synthase 3, mit...    82   1e-20
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit...    82   2e-20
ref|XP_009804022.1| PREDICTED: RNA pseudouridine synthase 3, mit...    85   2e-20
ref|XP_012854072.1| PREDICTED: RNA pseudouridine synthase 3, mit...    81   4e-20
gb|EYU23584.1| hypothetical protein MIMGU_mgv1a026780mg, partial...    81   4e-20
ref|XP_012444478.1| PREDICTED: RNA pseudouridine synthase 3, mit...    84   5e-20
gb|KHG09609.1| hypothetical protein F383_12972 [Gossypium arboreum]    84   5e-20

>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  102 bits (253), Expect(2) = 6e-27
 Identities = 47/63 (74%), Positives = 52/63 (82%)
 Frame = -2

Query: 272 PASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAISW 93
           PASA P IR SN++ QLG PK+G KPRQLLSLP FPAHPLPGK+ V + G PTHVTAISW
Sbjct: 27  PASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLPGKSLVNVSGLPTHVTAISW 86

Query: 92  IKY 84
           IKY
Sbjct: 87  IKY 89



 Score = 45.4 bits (106), Expect(2) = 6e-27
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLN 8
           YFDEIPG V+QSHFNKGLV ME  N
Sbjct: 90  YFDEIPGSVVQSHFNKGLVHMERSN 114


>ref|XP_002267010.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Vitis
           vinifera]
          Length = 479

 Score =  102 bits (253), Expect(2) = 6e-27
 Identities = 47/63 (74%), Positives = 52/63 (82%)
 Frame = -2

Query: 272 PASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAISW 93
           PASA P IR SN++ QLG PK+G KPRQLLSLP FPAHPLPGK+ V + G PTHVTAISW
Sbjct: 27  PASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPAHPLPGKSLVNVSGLPTHVTAISW 86

Query: 92  IKY 84
           IKY
Sbjct: 87  IKY 89



 Score = 45.4 bits (106), Expect(2) = 6e-27
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLN 8
           YFDEIPG V+QSHFNKGLV ME  N
Sbjct: 90  YFDEIPGSVVQSHFNKGLVHMERSN 114


>ref|XP_010263262.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nelumbo
           nucifera]
          Length = 474

 Score = 94.0 bits (232), Expect(2) = 7e-25
 Identities = 42/63 (66%), Positives = 50/63 (79%)
 Frame = -2

Query: 272 PASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAISW 93
           PA A   IR SN+I +LGCPK+  KPRQLLSLP FP HPLPGK+SV++ G+  HVTAISW
Sbjct: 25  PARATSVIRVSNNIARLGCPKEDPKPRQLLSLPPFPGHPLPGKSSVSVAGQSAHVTAISW 84

Query: 92  IKY 84
           +KY
Sbjct: 85  VKY 87



 Score = 46.6 bits (109), Expect(2) = 7e-25
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLN 8
           YFD+IPG VIQSHFNKGLV M C N
Sbjct: 88  YFDDIPGPVIQSHFNKGLVKMACPN 112


>gb|KGN63094.1| hypothetical protein Csa_2G402020 [Cucumis sativus]
          Length = 543

 Score = 94.7 bits (234), Expect(2) = 2e-22
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPA A+P IR SN+I QLG PK+G K RQLLSLP FP +PLPGKN V + G+ THVTAI 
Sbjct: 95  PPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQVGVSGESTHVTAIR 154

Query: 95  WIKY 84
           W+KY
Sbjct: 155 WVKY 158



 Score = 37.4 bits (85), Expect(2) = 2e-22
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMEC 14
           YFDEI    IQSHF KGLV +EC
Sbjct: 159 YFDEIQDSQIQSHFRKGLVQVEC 181


>ref|XP_011649894.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X1
           [Cucumis sativus]
          Length = 471

 Score = 94.7 bits (234), Expect(2) = 2e-22
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPA A+P IR SN+I QLG PK+G K RQLLSLP FP +PLPGKN V + G+ THVTAI 
Sbjct: 23  PPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQVGVSGESTHVTAIR 82

Query: 95  WIKY 84
           W+KY
Sbjct: 83  WVKY 86



 Score = 37.4 bits (85), Expect(2) = 2e-22
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMEC 14
           YFDEI    IQSHF KGLV +EC
Sbjct: 87  YFDEIQDSQIQSHFRKGLVQVEC 109


>ref|XP_011649895.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial isoform X2
           [Cucumis sativus]
          Length = 444

 Score = 94.7 bits (234), Expect(2) = 2e-22
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPA A+P IR SN+I QLG PK+G K RQLLSLP FP +PLPGKN V + G+ THVTAI 
Sbjct: 23  PPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGYPLPGKNQVGVSGESTHVTAIR 82

Query: 95  WIKY 84
           W+KY
Sbjct: 83  WVKY 86



 Score = 37.4 bits (85), Expect(2) = 2e-22
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMEC 14
           YFDEI    IQSHF KGLV +EC
Sbjct: 87  YFDEIQDSQIQSHFRKGLVQVEC 109


>ref|XP_008361299.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudouridine synthase 3,
           mitochondrial-like, partial [Malus domestica]
          Length = 441

 Score = 87.8 bits (216), Expect(2) = 7e-22
 Identities = 41/64 (64%), Positives = 47/64 (73%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPA  EP IR SNH+ +LG PK+G KPRQLLSLP FP HPLPGK S    G  + VTA+S
Sbjct: 24  PPAGGEPLIRVSNHVAKLGPPKEGPKPRQLLSLPPFPGHPLPGKRSHE-DGAVSRVTAVS 82

Query: 95  WIKY 84
           W+KY
Sbjct: 83  WVKY 86



 Score = 42.7 bits (99), Expect(2) = 7e-22
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLN 8
           YFDEI    IQSHFNKGLV MEC N
Sbjct: 87  YFDEIRDSAIQSHFNKGLVQMECPN 111


>ref|XP_008441208.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Cucumis
           melo]
          Length = 473

 Score = 97.1 bits (240), Expect(2) = 9e-22
 Identities = 44/64 (68%), Positives = 50/64 (78%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPA A+P IR SN+I QLG PK+G K RQLLSLP FP HPLPGKN V + G+ THVTAI 
Sbjct: 23  PPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPGHPLPGKNQVGVSGESTHVTAIR 82

Query: 95  WIKY 84
           W+KY
Sbjct: 83  WVKY 86



 Score = 33.1 bits (74), Expect(2) = 9e-22
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMEC 14
           YFDEI    IQS F KGLV +EC
Sbjct: 87  YFDEIQDSQIQSLFRKGLVQVEC 109


>ref|XP_012853147.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Erythranthe guttatus]
          Length = 513

 Score = 85.5 bits (210), Expect(2) = 2e-21
 Identities = 40/64 (62%), Positives = 49/64 (76%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPASA+  +R SN+I  LG PK+G KPRQLLSLP FP +PLPG+NS ++     HVTAIS
Sbjct: 26  PPASAKAVLRVSNNIAHLGAPKEGPKPRQLLSLPPFPGNPLPGRNSTSV----EHVTAIS 81

Query: 95  WIKY 84
           W+KY
Sbjct: 82  WLKY 85



 Score = 43.9 bits (102), Expect(2) = 2e-21
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLNSN 2
           YFD++   VIQ HFNKGLV MECLNS+
Sbjct: 86  YFDDVIPPVIQHHFNKGLVRMECLNSS 112


>ref|XP_012840385.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
           [Erythranthe guttatus] gi|848908360|ref|XP_012853148.1|
           PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial-like isoform X2 [Erythranthe guttatus]
          Length = 475

 Score = 85.5 bits (210), Expect(2) = 2e-21
 Identities = 40/64 (62%), Positives = 49/64 (76%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPASA+  +R SN+I  LG PK+G KPRQLLSLP FP +PLPG+NS ++     HVTAIS
Sbjct: 26  PPASAKAVLRVSNNIAHLGAPKEGPKPRQLLSLPPFPGNPLPGRNSTSV----EHVTAIS 81

Query: 95  WIKY 84
           W+KY
Sbjct: 82  WLKY 85



 Score = 43.9 bits (102), Expect(2) = 2e-21
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLNSN 2
           YFD++   VIQ HFNKGLV MECLNS+
Sbjct: 86  YFDDVIPPVIQHHFNKGLVRMECLNSS 112


>ref|XP_009358613.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Pyrus x
           bretschneideri]
          Length = 470

 Score = 86.7 bits (213), Expect(2) = 2e-21
 Identities = 40/64 (62%), Positives = 47/64 (73%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPA  EP IR +NH+ +LG PK+G KPRQLLSLP FP HPLPGK S    G  + VTA+S
Sbjct: 24  PPAGGEPLIRVANHVARLGPPKEGPKPRQLLSLPPFPGHPLPGKRSHE-DGAVSRVTAVS 82

Query: 95  WIKY 84
           W+KY
Sbjct: 83  WVKY 86



 Score = 42.7 bits (99), Expect(2) = 2e-21
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLN 8
           YFDEI    IQSHFNKGLV MEC N
Sbjct: 87  YFDEIRDSAIQSHFNKGLVQMECPN 111


>gb|EYU34909.1| hypothetical protein MIMGU_mgv1a006040mg [Erythranthe guttata]
          Length = 460

 Score = 85.5 bits (210), Expect(2) = 2e-21
 Identities = 40/64 (62%), Positives = 49/64 (76%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPASA+  +R SN+I  LG PK+G KPRQLLSLP FP +PLPG+NS ++     HVTAIS
Sbjct: 11  PPASAKAVLRVSNNIAHLGAPKEGPKPRQLLSLPPFPGNPLPGRNSTSV----EHVTAIS 66

Query: 95  WIKY 84
           W+KY
Sbjct: 67  WLKY 70



 Score = 43.9 bits (102), Expect(2) = 2e-21
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLNSN 2
           YFD++   VIQ HFNKGLV MECLNS+
Sbjct: 71  YFDDVIPPVIQHHFNKGLVRMECLNSS 97


>ref|XP_007023655.1| Pseudouridine synthase family protein [Theobroma cacao]
           gi|508779021|gb|EOY26277.1| Pseudouridine synthase
           family protein [Theobroma cacao]
          Length = 471

 Score = 85.9 bits (211), Expect(2) = 2e-21
 Identities = 41/64 (64%), Positives = 46/64 (71%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPA A+P +R SN +  LG PKQG KPRQLLSLP FP +PLPGKN    PG    VTAIS
Sbjct: 24  PPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPGYPLPGKN----PGGTARVTAIS 79

Query: 95  WIKY 84
           W+KY
Sbjct: 80  WLKY 83



 Score = 43.1 bits (100), Expect(2) = 2e-21
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLNS 5
           YFDEIP   IQSHFNKGLV ME  N+
Sbjct: 84  YFDEIPDSAIQSHFNKGLVQMESSNA 109


>ref|XP_009620200.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nicotiana
           tomentosiformis] gi|697097192|ref|XP_009620208.1|
           PREDICTED: RNA pseudouridine synthase 3, mitochondrial
           [Nicotiana tomentosiformis]
           gi|697097194|ref|XP_009620216.1| PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial [Nicotiana
           tomentosiformis] gi|697097196|ref|XP_009620223.1|
           PREDICTED: RNA pseudouridine synthase 3, mitochondrial
           [Nicotiana tomentosiformis]
          Length = 478

 Score = 81.6 bits (200), Expect(2) = 1e-20
 Identities = 40/60 (66%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = -2

Query: 260 EPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPT-HVTAISWIKY 84
           +P IR SN IT LG PK+G KP QLLSLP FP HPL GK + T P +P+ HVTAISWIKY
Sbjct: 32  QPVIRVSNSITHLGRPKEGAKPSQLLSLPPFPGHPLLGKKAATSPDQPSRHVTAISWIKY 91



 Score = 44.7 bits (104), Expect(2) = 1e-20
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSME 17
           YFDEIPG VIQSHFNKGLV +E
Sbjct: 92  YFDEIPGSVIQSHFNKGLVQLE 113


>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
           PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like isoform X3
           [Solanum tuberosum]
          Length = 475

 Score = 82.4 bits (202), Expect(2) = 2e-20
 Identities = 41/60 (68%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = -2

Query: 260 EPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPT-HVTAISWIKY 84
           EP IR SN+IT LG  K+G KP QLLSLP FP HPLPGK   T P +P+ HVTAISWIKY
Sbjct: 32  EPVIRVSNNITHLGRQKEGAKPSQLLSLPPFPGHPLPGKKVATGPDQPSCHVTAISWIKY 91



 Score = 43.5 bits (101), Expect(2) = 2e-20
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSME 17
           YFDEIPG VIQ+HFNKGLV +E
Sbjct: 92  YFDEIPGSVIQTHFNKGLVQLE 113


>ref|XP_009804022.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nicotiana
           sylvestris] gi|698518295|ref|XP_009804023.1| PREDICTED:
           RNA pseudouridine synthase 3, mitochondrial [Nicotiana
           sylvestris] gi|698518297|ref|XP_009804024.1| PREDICTED:
           RNA pseudouridine synthase 3, mitochondrial [Nicotiana
           sylvestris]
          Length = 478

 Score = 84.7 bits (208), Expect(2) = 2e-20
 Identities = 41/60 (68%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = -2

Query: 260 EPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPT-HVTAISWIKY 84
           +P IR SN IT LG PK G KP QLLSLP FP HPLPGK + T P +P+ HVTAISWIKY
Sbjct: 32  QPVIRVSNSITHLGRPKDGAKPSQLLSLPPFPGHPLPGKKAATSPDQPSRHVTAISWIKY 91



 Score = 40.8 bits (94), Expect(2) = 2e-20
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSME 17
           YFDEI G VIQSHFNKGLV +E
Sbjct: 92  YFDEILGSVIQSHFNKGLVQLE 113


>ref|XP_012854072.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like
           [Erythranthe guttatus] gi|848911213|ref|XP_012854073.1|
           PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial-like [Erythranthe guttatus]
          Length = 475

 Score = 80.9 bits (198), Expect(2) = 4e-20
 Identities = 37/64 (57%), Positives = 48/64 (75%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPAS +  +R SN+I  LG PK+G KP+QLLSLP FP +PLPG++S ++     HVTAIS
Sbjct: 26  PPASTKAVLRVSNNIAHLGAPKEGPKPKQLLSLPPFPGNPLPGRHSTSV----EHVTAIS 81

Query: 95  WIKY 84
           W+KY
Sbjct: 82  WLKY 85



 Score = 43.9 bits (102), Expect(2) = 4e-20
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLNSN 2
           YFD++   VIQ HFNKGLV MECLNS+
Sbjct: 86  YFDDVIPPVIQHHFNKGLVRMECLNSS 112


>gb|EYU23584.1| hypothetical protein MIMGU_mgv1a026780mg, partial [Erythranthe
           guttata]
          Length = 452

 Score = 80.9 bits (198), Expect(2) = 4e-20
 Identities = 37/64 (57%), Positives = 48/64 (75%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPAS +  +R SN+I  LG PK+G KP+QLLSLP FP +PLPG++S ++     HVTAIS
Sbjct: 7   PPASTKAVLRVSNNIAHLGAPKEGPKPKQLLSLPPFPGNPLPGRHSTSV----EHVTAIS 62

Query: 95  WIKY 84
           W+KY
Sbjct: 63  WLKY 66



 Score = 43.9 bits (102), Expect(2) = 4e-20
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLNSN 2
           YFD++   VIQ HFNKGLV MECLNS+
Sbjct: 67  YFDDVIPPVIQHHFNKGLVRMECLNSS 93


>ref|XP_012444478.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Gossypium
           raimondii] gi|823223472|ref|XP_012444479.1| PREDICTED:
           RNA pseudouridine synthase 3, mitochondrial [Gossypium
           raimondii] gi|763789432|gb|KJB56428.1| hypothetical
           protein B456_009G119600 [Gossypium raimondii]
          Length = 472

 Score = 84.3 bits (207), Expect(2) = 5e-20
 Identities = 42/64 (65%), Positives = 46/64 (71%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPA A+P IR SN++  LG PKQG KPRQLLSLP FP H LPGKNS T       VTAIS
Sbjct: 24  PPAYADPVIRVSNNVAYLGSPKQGPKPRQLLSLPPFPGHHLPGKNSAT-----GRVTAIS 78

Query: 95  WIKY 84
           W+KY
Sbjct: 79  WLKY 82



 Score = 40.0 bits (92), Expect(2) = 5e-20
 Identities = 18/27 (66%), Positives = 19/27 (70%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLNSN 2
           YFDEI    IQSHFNKGLV +E  N N
Sbjct: 83  YFDEISDSAIQSHFNKGLVEIESSNPN 109


>gb|KHG09609.1| hypothetical protein F383_12972 [Gossypium arboreum]
          Length = 468

 Score = 84.3 bits (207), Expect(2) = 5e-20
 Identities = 42/64 (65%), Positives = 46/64 (71%)
 Frame = -2

Query: 275 PPASAEPFIRFSNHITQLGCPKQGHKPRQLLSLPSFPAHPLPGKNSVTIPGKPTHVTAIS 96
           PPA A+P IR SN++  LG PKQG KPRQLLSLP FP H LPGKNS T       VTAIS
Sbjct: 24  PPAYADPVIRVSNNVAYLGSPKQGPKPRQLLSLPPFPGHHLPGKNSAT-----GRVTAIS 78

Query: 95  WIKY 84
           W+KY
Sbjct: 79  WLKY 82



 Score = 40.0 bits (92), Expect(2) = 5e-20
 Identities = 18/27 (66%), Positives = 19/27 (70%)
 Frame = -3

Query: 82  YFDEIPGDVIQSHFNKGLVSMECLNSN 2
           YFDEI    IQSHFNKGLV +E  N N
Sbjct: 83  YFDEISDSAIQSHFNKGLVKIESSNPN 109