BLASTX nr result

ID: Cornus23_contig00030057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00030057
         (414 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]    56   9e-06

>emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]
          Length = 1653

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = -3

Query: 319 LTLTKWDFRAGITGEIKEKGVRVVVLYGIPLHLWSYELFVVIRDFCGGFLWVE--ADENK 146
           + L KW  R G   E +++G   V + G+P+ LW+ ++   I + CGGF+ ++   +  +
Sbjct: 193 MRLEKWSQRTGCXSEEEKEGEAWVRIVGLPISLWNRDILSKIGEGCGGFVDIDEKTERKE 252

Query: 145 DVEMVRLHVS-RRGDCPKEVFIHDENVCYSVAV 50
           +++  R+ V    G  PK V +  EN+CYS+++
Sbjct: 253 EIQWARIRVRINEGKIPKMVEVCVENLCYSLSL 285


Top