BLASTX nr result

ID: Cornus23_contig00029860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00029860
         (597 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO54297.1| hypothetical protein CISIN_1g042261mg [Citrus sin...    59   4e-08

>gb|KDO54297.1| hypothetical protein CISIN_1g042261mg [Citrus sinensis]
          Length = 172

 Score = 58.5 bits (140), Expect(2) = 4e-08
 Identities = 27/55 (49%), Positives = 35/55 (63%)
 Frame = +2

Query: 20  FSTRHLSSFRFPLHPLFHMVLYHLNVCPLQVNPNFFRTISILLSLNRSRKLDLGM 184
           FS +H S+ RFPLHPL H   Y LN+ P+QV+PN  R +S  L LN  +  DL +
Sbjct: 48  FSCKHFSAIRFPLHPLIHNFFYRLNLTPVQVHPNSLRILSSALVLNIIKGWDLNL 102



 Score = 26.2 bits (56), Expect(2) = 4e-08
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 184 DLLYCYKVTKNRDDGRRFALFPRKNRSIYTCKPTSD 291
           D+  CYKV+  +D+   F L     R+I    PTS+
Sbjct: 104 DIFNCYKVSAIKDEHGFFHLASLHKRAIVCGNPTSE 139


Top