BLASTX nr result
ID: Cornus23_contig00029847
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00029847
(1251 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EFQ80763.1| hypothetical protein HMPREF0305_11074 [Corynebact... 196 5e-47
gb|EFQ80075.1| hypothetical protein HMPREF0305_11241 [Corynebact... 189 3e-45
gb|ESK57859.1| hypothetical protein PAJL_2583 [Propionibacterium... 99 9e-41
gb|EFS54330.1| hypothetical protein HMPREF9589_00552 [Propioniba... 96 2e-40
gb|EID19494.1| hypothetical protein HMPREF1043_0706 [Streptococc... 92 4e-36
gb|EFE81975.1| LOW QUALITY PROTEIN: conserved hypothetical prote... 89 4e-33
gb|ETI82480.1| hypothetical protein Q618_VCMC00001G0061 [Varibac... 148 1e-32
dbj|GAD81567.1| hypothetical protein NCAST_03_00002, partial [No... 86 8e-32
gb|KFM94800.1| hypothetical protein DJ90_6657 [Paenibacillus mac... 144 1e-31
gb|EFE80054.1| LOW QUALITY PROTEIN: conserved hypothetical prote... 89 5e-31
gb|EDX25829.1| conserved hypothetical protein [Streptomyces sp. ... 142 5e-31
emb|CDG37541.1| hypothetical protein CTHBC1_2972 [Ruminiclostrid... 140 2e-30
emb|CAJ30045.1| conserved hypothetical protein [Magnetospirillum... 107 2e-29
emb|CBL49510.1| conserved protein [Lactobacillus crispatus ST1] ... 127 2e-27
gb|EQG74591.1| hypothetical protein QKA_3524 [Clostridium diffic... 104 4e-27
gb|EFT57008.1| hypothetical protein HMPREF9610_00001, partial [P... 99 8e-27
gb|EFS57216.1| hypothetical protein HMPREF9593_00252 [Propioniba... 68 7e-26
gb|EFS79588.1| hypothetical protein HMPREF9597_01137, partial [P... 68 2e-25
gb|EFS78149.1| hypothetical protein HMPREF9591_00001, partial [P... 68 2e-25
gb|EQJ26087.1| hypothetical protein QS5_0359 [Clostridium diffic... 94 5e-24
>gb|EFQ80763.1| hypothetical protein HMPREF0305_11074 [Corynebacterium
pseudogenitalium ATCC 33035] gi|311304791|gb|EFQ80862.1|
hypothetical protein HMPREF0305_11003 [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 105
Score = 196 bits (497), Expect = 5e-47
Identities = 92/105 (87%), Positives = 93/105 (88%)
Frame = +1
Query: 733 VVPADSQQIPRARCYSGNPTTHMXXXXXXXXXXXXAGHSKPLHLTTTHEHDDGSHRKLGP 912
+VPADSQQIPRARCYSGNPTTHM AGHSKPLHLTTTHEHDDGSHRKLGP
Sbjct: 1 MVPADSQQIPRARCYSGNPTTHMPLSSTTGLSPSPAGHSKPLHLTTTHEHDDGSHRKLGP 60
Query: 913 TTPHTQPLPGITCTRFSLIHVRSPLLAESLLFSPPTGTEMFHFPA 1047
TTPHTQPLPGITCTRFSLIHVRSPLLAESLLFSPPTGTEMFHFPA
Sbjct: 61 TTPHTQPLPGITCTRFSLIHVRSPLLAESLLFSPPTGTEMFHFPA 105
>gb|EFQ80075.1| hypothetical protein HMPREF0305_11241 [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 106
Score = 189 bits (481), Expect = 3e-45
Identities = 91/106 (85%), Positives = 93/106 (87%), Gaps = 1/106 (0%)
Frame = +1
Query: 733 VVPADSQQIPRARCYSGNPTTHMXXXXXXXXXXXXAGHSKPLHLTTTHEHDDGSHRKLGP 912
+VPADSQQIPRARCYSGNPTTHM AGHSKPLHLTTTHEHDDGSHR+LGP
Sbjct: 1 MVPADSQQIPRARCYSGNPTTHMPLSSTTGLSPSPAGHSKPLHLTTTHEHDDGSHRQLGP 60
Query: 913 TTPHTQPLPGITCTRFSLIHVRSPLLAES-LLFSPPTGTEMFHFPA 1047
TTPHTQPLPGITCTRFSLIHVRSPLLAES LLFSPPTGTEMFHFPA
Sbjct: 61 TTPHTQPLPGITCTRFSLIHVRSPLLAESLLLFSPPTGTEMFHFPA 106
>gb|ESK57859.1| hypothetical protein PAJL_2583 [Propionibacterium acnes HL042PA3]
Length = 349
Score = 98.6 bits (244), Expect(3) = 9e-41
Identities = 51/79 (64%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +3
Query: 621 LYAHGFRNYFTPLPGYFSPFPHGTSSTIGHTEYLGLPGGPGRFTADSTSPLLLG-QPNNP 797
++A GFRN FTPLPGYFSPFPHGT EYLGL GGP RFT +STSP LLG P+
Sbjct: 1 MHATGFRNSFTPLPGYFSPFPHGTHPLSVTKEYLGLTGGPARFTRNSTSPTLLGATPHQC 60
Query: 798 HAIVFNYRTLTFSGRPFQT 854
HA ++YRTLT SG P QT
Sbjct: 61 HA--YSYRTLTHSGTPSQT 77
Score = 67.8 bits (164), Expect(3) = 9e-41
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +2
Query: 911 PQHRTHNPYQVSHAHGLASSTFVRHY*QNHYYFLLLRVLRCFTSPRKPP 1057
PQ RT N ++ H HGLASS F RHY +NH FL LRVLRCFTSPR P
Sbjct: 98 PQPRTCNTCRLEHTHGLASSAFARHYSRNHTCFLFLRVLRCFTSPRYHP 146
Score = 50.8 bits (120), Expect(3) = 9e-41
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +1
Query: 1102 PGFPIRTSSDQRLIDNSPRLNAAFHVLHRLSMPRHPP 1212
PGFPIRT D + NSP L A +VLHRL +PRHPP
Sbjct: 163 PGFPIRTPPDHSSLTNSPGLIAGHNVLHRLLVPRHPP 199
>gb|EFS54330.1| hypothetical protein HMPREF9589_00552 [Propionibacterium acnes
HL059PA1]
Length = 349
Score = 95.5 bits (236), Expect(3) = 2e-40
Identities = 50/79 (63%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Frame = +3
Query: 621 LYAHGFRNYFTPLPGYFSPFPHGTSSTIGHTEYLGLPGGPGRFTADSTSPLLLG-QPNNP 797
++A GFRN FTPLPGYFSPFPHGT EYLGL GGP RFT +STS LLG P+
Sbjct: 1 MHATGFRNSFTPLPGYFSPFPHGTHPLSVTKEYLGLTGGPARFTRNSTSSTLLGATPHQC 60
Query: 798 HAIVFNYRTLTFSGRPFQT 854
HA ++YRTLT SG P QT
Sbjct: 61 HA--YSYRTLTHSGTPSQT 77
Score = 67.8 bits (164), Expect(3) = 2e-40
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +2
Query: 911 PQHRTHNPYQVSHAHGLASSTFVRHY*QNHYYFLLLRVLRCFTSPRKPP 1057
PQ RT N ++ H HGLASS F RHY +NH FL LRVLRCFTSPR P
Sbjct: 98 PQPRTCNTCRLEHTHGLASSAFARHYSRNHTCFLFLRVLRCFTSPRYHP 146
Score = 52.8 bits (125), Expect(3) = 2e-40
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +1
Query: 1102 PGFPIRTSSDQRLIDNSPRLNAAFHVLHRLSMPRHPP 1212
PGFPIRTS D + NSP L A +VLHRL +PRHPP
Sbjct: 163 PGFPIRTSPDHSSLTNSPGLIAGHNVLHRLLVPRHPP 199
>gb|EID19494.1| hypothetical protein HMPREF1043_0706 [Streptococcus anginosus
subsp. whileyi CCUG 39159]
Length = 223
Score = 92.0 bits (227), Expect(2) = 4e-36
Identities = 46/55 (83%), Positives = 47/55 (85%)
Frame = +3
Query: 327 MHFGENQLSRSLIGLSPLPTAHPPGFQP*WVRTSTTSYRRFTLAMGRSPRFGSRT 491
MHFGENQLSRSLIGLSPLPTAHP FQ WVR+ST SY RF LAMGRS RFGSRT
Sbjct: 1 MHFGENQLSRSLIGLSPLPTAHPLHFQLKWVRSSTRSYTRFNLAMGRSLRFGSRT 55
Score = 89.0 bits (219), Expect(2) = 4e-36
Identities = 71/186 (38%), Positives = 87/186 (46%), Gaps = 26/186 (13%)
Frame = +2
Query: 509 FGLAFATATPHGLTSPHTTNSQAHSSKGTPSPHRL*RLVCTRFQELFHSPPGVLFTFPSR 688
F LAFATA+PHGLTSP TNSQAHSSKGT SPH+ VC H G + + PSR
Sbjct: 62 FRLAFATASPHGLTSPRITNSQAHSSKGTLSPHKEAPTVCR------HMVSGTI-SLPSR 114
Query: 689 YFIHYRSH*VFRLTGWSRQIHSRFHEPAATRATQQPTCHCLQLQDSHLLRQA---IPNHF 859
H+ S + R+ + +A Q + L DSH + +A N
Sbjct: 115 GTFHH-----------SLTVLIRYRSTGSIQAYQ------VVLADSHGIPRAPCYSGNPP 157
Query: 860 T*QQHTST-----MMVVTANW------------------GPQHRTHNPYQVSHAHGLASS 970
T +H ST V +W GPQHRT NP +VSH +GLA S
Sbjct: 158 TAAEHISTTGLSPSTVQHPHWFVYMPAPHCAMPADMTRRGPQHRTCNPCRVSHTYGLAPS 217
Query: 971 TFVRHY 988
F RHY
Sbjct: 218 AFARHY 223
>gb|EFE81975.1| LOW QUALITY PROTEIN: conserved hypothetical protein, partial
[Streptomyces albus J1074]
Length = 172
Score = 89.0 bits (219), Expect(3) = 4e-33
Identities = 48/69 (69%), Positives = 50/69 (72%), Gaps = 7/69 (10%)
Frame = +2
Query: 509 FGLAFATATPHGLTSPHTTNSQAHSSKGTPSPH-------RL*RLVCTRFQELFHSPPGV 667
FGLAFATA+PHGLTS HT NSQAHSSKGT S L RLV TRFQ LFHS P V
Sbjct: 44 FGLAFATASPHGLTSLHTANSQAHSSKGTQSRRTEQARCATLPRLVGTRFQVLFHSAPAV 103
Query: 668 LFTFPSRYF 694
LFT PSRY+
Sbjct: 104 LFTIPSRYY 112
Score = 64.3 bits (155), Expect(3) = 4e-33
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = +1
Query: 382 PQLIPQVFNLSGFGPPQRLTAASPWPWVDHPASGLEHAT 498
PQ+IPQVFN GFGPP+ LTAAS PW+DH ASGLE AT
Sbjct: 1 PQVIPQVFNPGGFGPPRPLTAASTCPWLDHSASGLERAT 39
Score = 38.1 bits (87), Expect(3) = 4e-33
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3
Query: 714 EYLGLPGGPGRFTADSTSPLLLGQPNN 794
EYLGL GGP RFT D + P+LLG +N
Sbjct: 119 EYLGLAGGPARFTRDFSGPVLLGCLSN 145
>gb|ETI82480.1| hypothetical protein Q618_VCMC00001G0061 [Varibaculum cambriense
DORA_20] gi|566217271|gb|ETI82948.1| hypothetical protein
Q618_VCMC00001G0529 [Varibaculum cambriense DORA_20]
Length = 392
Score = 148 bits (373), Expect = 1e-32
Identities = 116/313 (37%), Positives = 144/313 (46%), Gaps = 17/313 (5%)
Frame = +1
Query: 364 LAFHPYPQLIPQVFNLSGFGPPQRLTAASPWPWVDHPASGLEHATIHPIRTRFRYGYPTR 543
+AFHPYPQLIP VFNL G GPP+R TAAS WPWVDHPASGL HATI P F P +
Sbjct: 1 MAFHPYPQLIPPVFNLGGCGPPRRSTAASTWPWVDHPASGLCHATITPPGLGFPTTTPQQ 60
Query: 544 VNLATYH*LAGSFFKRHAITTQALTACMHTVSGTISLPSRGTFHLSLTVL---------- 693
VNLAT H + +I T G+ L + G F T L
Sbjct: 61 VNLATQH----NSQAHSSIGTPPPHQPPKGSRGSDGLKTLG-FRNYFTPLPGYFSPFPHG 115
Query: 694 -HPLSVTLSI*AYRVVPADSQQIPRARCYSGNPTTHMXXXXXXXXXXXXAGHSKPLHLTT 870
+PLSVT+ + AY +V ADS +IPRA YSG A H +L T
Sbjct: 116 TNPLSVTMPVQAYPMVWADSHEIPRAPRYSGTKPNATHTQPATRLSRSTARHP---NLFT 172
Query: 871 THEHDDGSHRKL----GPTTPHTQPLPGITCTRFSLIHVRSPLLAESLLFSPPTGTEMFH 1038
+H +R++ P P + RSPL + L GT+MFH
Sbjct: 173 SHTQKRSKNRQILNDFVPQPRLRNPCRVSHANGLANTRYRSPLHTDYL---TKGGTKMFH 229
Query: 1039 FPA*TPTTAMNSLKGNPT*PGPGFPIRTSSDQRLIDNSPRLNAA--FHVLHRLSMPRHPP 1212
FP T S++ N T G+PIR DQR + NSPRL+ A + R
Sbjct: 230 FPPYQHTPIKTSMRANHTQLWSGYPIRKPPDQRTLANSPRLSPATTSFIGTRCQGIHQTL 289
Query: 1213 DRKSTRLNSSHQP 1251
K+ +N HQP
Sbjct: 290 KTKNKPINKKHQP 302
>dbj|GAD81567.1| hypothetical protein NCAST_03_00002, partial [Nocardia asteroides
NBRC 15531]
Length = 127
Score = 85.5 bits (210), Expect(3) = 8e-32
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = +1
Query: 607 QALTACMHTVSGTISLPSRGTFHLSLTVLHPLSVTLSI*AYRVVPADSQQIPRARCYSG 783
+ALT C TVSGTISLPSRGTFHLSLTVL SI AYRVVPADSQQI RARCYSG
Sbjct: 44 KALTDCKRTVSGTISLPSRGTFHLSLTVLVRYRSPGSIQAYRVVPADSQQISRARCYSG 102
Score = 69.7 bits (169), Expect(3) = 8e-32
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 509 FGLAFATATPHGLTSPHTTNSQAHSSKGTPSPH 607
FGLAFATATPHGLTSPHT +SQAHSSKGTPSPH
Sbjct: 8 FGLAFATATPHGLTSPHTDDSQAHSSKGTPSPH 40
Score = 32.0 bits (71), Expect(3) = 8e-32
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 807 VFNYRTLTFSGRPFQTTS 860
VF YRT+T GRPFQTTS
Sbjct: 110 VFVYRTITVYGRPFQTTS 127
>gb|KFM94800.1| hypothetical protein DJ90_6657 [Paenibacillus macerans]
Length = 189
Score = 144 bits (364), Expect = 1e-31
Identities = 90/183 (49%), Positives = 107/183 (58%), Gaps = 6/183 (3%)
Frame = +1
Query: 163 VWAVSLSTTELIPRSLTAALSLTGIRSLADFSNLVGPLGHPVLYLRQETRDAAPKCISGR 342
VWAVSL T +L LT S+ GIRSL + N GP VLYL +A+PK ISGR
Sbjct: 2 VWAVSLLTMDLSTHCLTPGESVYGIRSLTELGNPCGPRTQSVLYLHDCHTEASPKAISGR 61
Query: 343 TSYHGV*LAFHPYPQLIPQVFNLSGFGPPQRLTAASPWPWVDHPASGLEHATIHPI-RTR 519
TSY V L F YP LIP +FN+ GFGPP R+TA SPW VDH SGL T + R
Sbjct: 62 TSYLRVRLEFLRYPHLIPALFNVRGFGPPVRVTAPSPWTGVDHTVSGLRLQTKFALFRLA 121
Query: 520 FRYGYPTRVNLA-----TYH*LAGSFFKRHAITTQALTACMHTVSGTISLPSRGTFHLSL 684
F +++NLA H G+ + ALT+C HTVSG++SLP RG FHLSL
Sbjct: 122 FAAAPLSQLNLARKRNSPVHSTKGT----PSPLKWALTSCKHTVSGSLSLPFRGAFHLSL 177
Query: 685 TVL 693
TVL
Sbjct: 178 TVL 180
>gb|EFE80054.1| LOW QUALITY PROTEIN: conserved hypothetical protein, partial
[Streptomyces albus J1074]
Length = 172
Score = 89.0 bits (219), Expect(3) = 5e-31
Identities = 48/69 (69%), Positives = 50/69 (72%), Gaps = 7/69 (10%)
Frame = +2
Query: 509 FGLAFATATPHGLTSPHTTNSQAHSSKGTPSPH-------RL*RLVCTRFQELFHSPPGV 667
FGLAFATA+PHGLTS HT NSQAHSSKGT S L RLV TRFQ LFHS P V
Sbjct: 44 FGLAFATASPHGLTSLHTANSQAHSSKGTQSRRTEQARCATLPRLVGTRFQVLFHSAPAV 103
Query: 668 LFTFPSRYF 694
LFT PSRY+
Sbjct: 104 LFTIPSRYY 112
Score = 57.4 bits (137), Expect(3) = 5e-31
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1
Query: 382 PQLIPQVFNLSGFGPPQRLTAASPWPWVDHPASG 483
PQ+IPQVFN GFGPP+ LTAAS PW+DH ASG
Sbjct: 1 PQVIPQVFNPGGFGPPRPLTAASTCPWLDHSASG 34
Score = 38.1 bits (87), Expect(3) = 5e-31
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3
Query: 714 EYLGLPGGPGRFTADSTSPLLLGQPNN 794
EYLGL GGP RFT D + P+LLG +N
Sbjct: 119 EYLGLAGGPARFTRDFSGPVLLGCLSN 145
>gb|EDX25829.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 194
Score = 142 bits (359), Expect = 5e-31
Identities = 83/146 (56%), Positives = 88/146 (60%), Gaps = 20/146 (13%)
Frame = +2
Query: 317 LHLNAFRGEPAITEFDWPFTPTHSSSPRFSTLVGSDLHNVLPPLHPGHG*ITPLRV*NMP 496
+HLNAFRGEPAITEFDWPFTP H SSPRFSTLVG H L N+P
Sbjct: 1 MHLNAFRGEPAITEFDWPFTPNHRSSPRFSTLVGFGPHESLTSAS------------NLP 48
Query: 497 L-------------YTPFGLAFATATPHGLTSPHTTNSQAHSSKGTPS-------PHRL* 616
+ FGLAFATA+PHGLTS HT NSQAHSSKGT S L
Sbjct: 49 MARSLRFGSRACNSIALFGLAFATASPHGLTSLHTANSQAHSSKGTQSRLYVQAHTATLP 108
Query: 617 RLVCTRFQELFHSPPGVLFTFPSRYF 694
RLV TRFQ LFHS P VLFT PSRY+
Sbjct: 109 RLVGTRFQVLFHSAPAVLFTIPSRYY 134
>emb|CDG37541.1| hypothetical protein CTHBC1_2972 [Ruminiclostridium thermocellum
BC1]
Length = 157
Score = 140 bits (353), Expect = 2e-30
Identities = 74/123 (60%), Positives = 83/123 (67%)
Frame = +1
Query: 163 VWAVSLSTTELIPRSLTAALSLTGIRSLADFSNLVGPLGHPVLYLRQETRDAAPKCISGR 342
VWAVSLST +LI SLT L GI+SL F N V PL VLYLRQ +A+PK ISGR
Sbjct: 2 VWAVSLSTMKLISHSLTPKQHLDGIQSLRGFGNPVRPLAQSVLYLRQTLLEASPKAISGR 61
Query: 343 TSYHGV*LAFHPYPQLIPQVFNLSGFGPPQRLTAASPWPWVDHPASGLEHATIHPIRTRF 522
TSY V L F YPQLIP +FN GFGPP+ T AS PW+ HP SGL HAT PI+TRF
Sbjct: 62 TSYIRVRLEFLRYPQLIPNLFNGYGFGPPRDFTLASTCPWIGHPVSGLLHATCRPIKTRF 121
Query: 523 RYG 531
+G
Sbjct: 122 PFG 124
>emb|CAJ30045.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
MSR-1] gi|566555979|emb|CDK99198.1| protein of unknown
function [Magnetospirillum gryphiswaldense MSR-1 v2]
Length = 259
Score = 107 bits (266), Expect(2) = 2e-29
Identities = 59/110 (53%), Positives = 67/110 (60%), Gaps = 7/110 (6%)
Frame = +1
Query: 364 LAFHPYPQLIPQVFNLSGFGPPQRLTAASPWPWVDHPASGLEHATIHPIRTRFRYGYPTR 543
+AFHPYPQ+IP FN GFGPP +T S PW+DH SGL HAT PI+TRFR Y R
Sbjct: 1 MAFHPYPQIIPDFFNRRGFGPPVGVTPPSTCPWIDHSVSGLMHATRRPIQTRFRCAYTYR 60
Query: 544 VNLATY-----H*LAG--SFFKRHAITTQALTACMHTVSGTISLPSRGTF 672
+ LA Y H G S FKR A TAC H+VSGT+SLP G F
Sbjct: 61 LKLAAYTNSLTHYTKGTPSPFKR------APTACRHSVSGTVSLPLSGCF 104
Score = 51.6 bits (122), Expect(2) = 2e-29
Identities = 26/42 (61%), Positives = 26/42 (61%)
Frame = +3
Query: 654 PLPGYFSPFPHGTSSTIGHTEYLGLPGGPGRFTADSTSPLLL 779
PL G FSPFPHGTSS EYLGL GP F D T P LL
Sbjct: 99 PLSGCFSPFPHGTSSLSVTEEYLGLEDGPPMFRQDFTCPALL 140
>emb|CBL49510.1| conserved protein [Lactobacillus crispatus ST1]
gi|295030410|emb|CBL49889.1| conserved protein
[Lactobacillus crispatus ST1]
gi|295030423|emb|CBL49902.1| conserved protein
[Lactobacillus crispatus ST1]
gi|295031618|emb|CBL51097.1| conserved protein
[Lactobacillus crispatus ST1]
Length = 156
Score = 127 bits (319), Expect(2) = 2e-27
Identities = 67/123 (54%), Positives = 73/123 (59%)
Frame = +1
Query: 163 VWAVSLSTTELIPRSLTAALSLTGIRSLADFSNLVGPLGHPVLYLRQETRDAAPKCISGR 342
+WAVSLSTT+LI RSLT D GPL LYL +A+PK IS R
Sbjct: 2 IWAVSLSTTDLITRSLTPVYGYLEFVVYLDSVTPDGPLVQTELYLHYPLHEASPKAISER 61
Query: 343 TSYHGV*LAFHPYPQLIPQVFNLSGFGPPQRLTAASPWPWVDHPASGLEHATIHPIRTRF 522
TSY V L FH YPQLIP +FNL GFGPP R T S W WV H SGL H T PI+TRF
Sbjct: 62 TSYLQVRLEFHRYPQLIPAIFNLRGFGPPVRFTTPSAWSWVGHLVSGLRHLTFRPIKTRF 121
Query: 523 RYG 531
R G
Sbjct: 122 RSG 124
Score = 24.3 bits (51), Expect(2) = 2e-27
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 564 LTRRLILQKARH 599
+TRR ILQKARH
Sbjct: 136 VTRRFILQKARH 147
>gb|EQG74591.1| hypothetical protein QKA_3524 [Clostridium difficile DA00165]
gi|531641939|gb|EQJ20122.1| hypothetical protein
QS3_0132 [Clostridium difficile P13]
gi|531708916|gb|EQJ85959.1| hypothetical protein
QU7_0117 [Clostridium difficile P46]
gi|548681502|gb|ERM50695.1| hypothetical protein
QUG_0137 [Clostridium difficile P53]
gi|548683161|gb|ERM52323.1| hypothetical protein
QUQ_0118 [Clostridium difficile P68]
Length = 152
Score = 104 bits (260), Expect(2) = 4e-27
Identities = 50/87 (57%), Positives = 58/87 (66%)
Frame = +1
Query: 271 PLGHPVLYLRQETRDAAPKCISGRTSYHGV*LAFHPYPQLIPQVFNLSGFGPPQRLTAAS 450
PLGH VLYLR +A+PK ISGRTSY L FH YPQ+IP++FN GFGPP+ T AS
Sbjct: 4 PLGHSVLYLRISHLEASPKAISGRTSYLRARLEFHRYPQVIPELFNARGFGPPRNFTFAS 63
Query: 451 PWPWVDHPASGLEHATIHPIRTRFRYG 531
WV P SGL T ++TRFRYG
Sbjct: 64 SCSWVGRPVSGLRQVTERSVKTRFRYG 90
Score = 46.2 bits (108), Expect(2) = 4e-27
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +2
Query: 617 RLVCTRFQELFHSPPGVLFTFPSRYF 694
+LV FQ LFHSPPGVLFTFPSRY+
Sbjct: 121 QLVSAGFQVLFHSPPGVLFTFPSRYY 146
>gb|EFT57008.1| hypothetical protein HMPREF9610_00001, partial [Propionibacterium
acnes HL027PA2]
Length = 281
Score = 99.0 bits (245), Expect(2) = 8e-27
Identities = 72/170 (42%), Positives = 85/170 (50%), Gaps = 11/170 (6%)
Frame = +3
Query: 621 LYAHGFRNYFTPLPGYFSPFPHGTSSTIGHTEYLGLPGGPGRFTADSTSPLLLG-QPNNP 797
++A GFRN FTPLPGYFSPFPHGT EYLGL GGP RFT +STSP LLG P+
Sbjct: 1 MHATGFRNSFTPLPGYFSPFPHGTHPLSVTKEYLGLTGGPARFTRNSTSPTLLGATPHQC 60
Query: 798 HAIVFNYRTLTFSGRPFQTTS------PNNNTRAR*W*SPQIGAHNTAHTTPTRYHMHTV 959
HA ++YRTLT SG P QT + +R PQ NT T +
Sbjct: 61 HA--YSYRTLTHSGTPSQTLHLHATFLTGQSCGSRTTRPPQPRTCNTCRLEHTHGLASSA 118
Query: 960 *PHPRSFATTS----RIIIIFSSYGY*DVSLPRVNPHNSYEFTEG*PHIT 1097
H S T R++ F+S PR +PH Y F G P T
Sbjct: 119 FAHHYSRNHTCFLFLRVLRCFTS--------PRYHPH-PYTFRAGPPDTT 159
Score = 50.8 bits (120), Expect(2) = 8e-27
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +1
Query: 1102 PGFPIRTSSDQRLIDNSPRLNAAFHVLHRLSMPRHPP 1212
PGFPIRT D + NSP L A +VLHRL +PRHPP
Sbjct: 163 PGFPIRTPPDHSSLTNSPGLIAGHNVLHRLLVPRHPP 199
>gb|EFS57216.1| hypothetical protein HMPREF9593_00252 [Propionibacterium acnes
HL046PA2]
Length = 314
Score = 67.8 bits (164), Expect(3) = 7e-26
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +2
Query: 911 PQHRTHNPYQVSHAHGLASSTFVRHY*QNHYYFLLLRVLRCFTSPRKPP 1057
PQ RT N ++ H HGLASS F RHY +NH FL LRVLRCFTSPR P
Sbjct: 63 PQPRTCNTCRLEHTHGLASSAFARHYSRNHTCFLFLRVLRCFTSPRYHP 111
Score = 50.8 bits (120), Expect(3) = 7e-26
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +1
Query: 1102 PGFPIRTSSDQRLIDNSPRLNAAFHVLHRLSMPRHPP 1212
PGFPIRT D + NSP L A +VLHRL +PRHPP
Sbjct: 128 PGFPIRTPPDHSSLTNSPGLIAGHNVLHRLLVPRHPP 164
Score = 48.1 bits (113), Expect(3) = 7e-26
Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +3
Query: 726 LPGGPGRFTADSTSPLLLG-QPNNPHAIVFNYRTLTFSGRPFQT 854
+ GGP RFT +STSP LLG P+ HA ++YRTLT SG P QT
Sbjct: 1 MTGGPARFTRNSTSPTLLGATPHQCHA--YSYRTLTHSGTPSQT 42
>gb|EFS79588.1| hypothetical protein HMPREF9597_01137, partial [Propionibacterium
acnes HL005PA4]
Length = 255
Score = 67.8 bits (164), Expect(3) = 2e-25
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +2
Query: 911 PQHRTHNPYQVSHAHGLASSTFVRHY*QNHYYFLLLRVLRCFTSPRKPP 1057
PQ RT N ++ H HGLASS F RHY +NH FL LRVLRCFTSPR P
Sbjct: 63 PQPRTCNTCRLEHTHGLASSAFARHYSRNHTCFLFLRVLRCFTSPRYHP 111
Score = 52.8 bits (125), Expect(3) = 2e-25
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +1
Query: 1102 PGFPIRTSSDQRLIDNSPRLNAAFHVLHRLSMPRHPP 1212
PGFPIRTS D + NSP L A +VLHRL +PRHPP
Sbjct: 128 PGFPIRTSPDHSSLTNSPGLIAGHNVLHRLLVPRHPP 164
Score = 45.1 bits (105), Expect(3) = 2e-25
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +3
Query: 726 LPGGPGRFTADSTSPLLLG-QPNNPHAIVFNYRTLTFSGRPFQT 854
+ GGP RFT +STS LLG P+ HA ++YRTLT SG P QT
Sbjct: 1 MTGGPARFTRNSTSSTLLGATPHQCHA--YSYRTLTHSGTPSQT 42
>gb|EFS78149.1| hypothetical protein HMPREF9591_00001, partial [Propionibacterium
acnes HL086PA1]
Length = 239
Score = 67.8 bits (164), Expect(3) = 2e-25
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +2
Query: 911 PQHRTHNPYQVSHAHGLASSTFVRHY*QNHYYFLLLRVLRCFTSPRKPP 1057
PQ RT N ++ H HGLASS F RHY +NH FL LRVLRCFTSPR P
Sbjct: 63 PQPRTCNTCRLEHTHGLASSAFARHYSRNHTCFLFLRVLRCFTSPRYHP 111
Score = 52.8 bits (125), Expect(3) = 2e-25
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +1
Query: 1102 PGFPIRTSSDQRLIDNSPRLNAAFHVLHRLSMPRHPP 1212
PGFPIRTS D + NSP L A +VLHRL +PRHPP
Sbjct: 128 PGFPIRTSPDHSSLTNSPGLIAGHNVLHRLLVPRHPP 164
Score = 45.1 bits (105), Expect(3) = 2e-25
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +3
Query: 726 LPGGPGRFTADSTSPLLLG-QPNNPHAIVFNYRTLTFSGRPFQT 854
+ GGP RFT +STS LLG P+ HA ++YRTLT SG P QT
Sbjct: 1 MTGGPARFTRNSTSSTLLGATPHQCHA--YSYRTLTHSGTPSQT 42
>gb|EQJ26087.1| hypothetical protein QS5_0359 [Clostridium difficile P15]
gi|531719306|gb|EQJ96212.1| hypothetical protein
QUA_0359 [Clostridium difficile P49]
gi|531719763|gb|EQJ96666.1| hypothetical protein
QUA_0130 [Clostridium difficile P49]
gi|531720034|gb|EQJ96934.1| hypothetical protein
QUA_0121 [Clostridium difficile P49]
gi|548664239|gb|ERM33690.1| hypothetical protein
QUO_3590 [Clostridium difficile P64]
gi|548670973|gb|ERM40316.1| hypothetical protein
QUO_0144 [Clostridium difficile P64]
gi|548671083|gb|ERM40423.1| hypothetical protein
QUO_0136 [Clostridium difficile P64]
Length = 144
Score = 94.4 bits (233), Expect(2) = 5e-24
Identities = 45/82 (54%), Positives = 54/82 (65%)
Frame = +1
Query: 286 VLYLRQETRDAAPKCISGRTSYHGV*LAFHPYPQLIPQVFNLSGFGPPQRLTAASPWPWV 465
+LYLR +A+PK ISGRTSY L FH YPQ+IP++FN GFGPP+ T AS WV
Sbjct: 1 MLYLRISHLEASPKAISGRTSYLRARLEFHRYPQVIPELFNARGFGPPRNFTFASSCSWV 60
Query: 466 DHPASGLEHATIHPIRTRFRYG 531
P SGL T ++TRFRYG
Sbjct: 61 GRPVSGLRQVTERSVKTRFRYG 82
Score = 46.2 bits (108), Expect(2) = 5e-24
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +2
Query: 617 RLVCTRFQELFHSPPGVLFTFPSRYF 694
+LV FQ LFHSPPGVLFTFPSRY+
Sbjct: 113 QLVSAGFQVLFHSPPGVLFTFPSRYY 138