BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00029787
         (374 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013897004.1| photosystem II PsbY protein [Monoraphidium n...    61   3e-07
ref|XP_001698338.1| Ycf32-related subunit of photosystem II [Chl...    57   5e-06
ref|XP_005651838.1| hypothetical protein COCSUDRAFT_52123 [Cocco...    57   7e-06
ref|XP_001692627.1| ycf32-related polyprotein of photosystem II ...    56   9e-06

>ref|XP_013897004.1| photosystem II PsbY protein [Monoraphidium neglectum]
           gi|761966186|gb|KIY97984.1| photosystem II PsbY protein
           [Monoraphidium neglectum]
          Length = 287

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 30/42 (71%), Positives = 33/42 (78%)
 Frame = -2

Query: 304 TEIAQLAKSDNRPLIIATLFIPVVGWVGFNILGPALNQAAQM 179
           TE+AQLA SDNR  IIA LF+P VGWV FNILGP  NQ A+M
Sbjct: 231 TEVAQLAASDNRIGIIALLFLPAVGWVAFNILGPLNNQLARM 272



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = -2

Query: 304 TEIAQLAKSDNRPLIIATLFIPVVGWVGFNILGPALNQAAQM 179
           +E+AQLA +DNR  IIA LF+P VGWV FNILGP  NQ ++M
Sbjct: 148 SEVAQLAATDNRIGIIALLFLPAVGWVAFNILGPLTNQLSRM 189


>ref|XP_001698338.1| Ycf32-related subunit of photosystem II [Chlamydomonas reinhardtii]
           gi|158282078|gb|EDP07831.1| Ycf32-related subunit of
           photosystem II [Chlamydomonas reinhardtii]
          Length = 260

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -2

Query: 304 TEIAQLAKSDNRPLIIATLFIPVVGWVGFNILGPALNQAAQM 179
           TEIA LA SDNR  I+ATL +PV+GWVGFNI G    Q +QM
Sbjct: 214 TEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQM 255


>ref|XP_005651838.1| hypothetical protein COCSUDRAFT_52123 [Coccomyxa subellipsoidea
           C-169] gi|384253820|gb|EIE27294.1| hypothetical protein
           COCSUDRAFT_52123 [Coccomyxa subellipsoidea C-169]
          Length = 286

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = -2

Query: 301 EIAQLAKSDNRPLIIATLFIPVVGWVGFNILGPALNQ 191
           E+AQLA  D+R  IIATLF+PV+GWV FNI GPALNQ
Sbjct: 156 EVAQLAAGDSRFAIIATLFLPVIGWVLFNIGGPALNQ 192


>ref|XP_001692627.1| ycf32-related polyprotein of photosystem II [Chlamydomonas
           reinhardtii] gi|158268654|gb|EDO95697.1| ycf32-related
           polyprotein of photosystem II, partial [Chlamydomonas
           reinhardtii]
          Length = 354

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 27/42 (64%), Positives = 30/42 (71%)
 Frame = -2

Query: 304 TEIAQLAKSDNRPLIIATLFIPVVGWVGFNILGPALNQAAQM 179
           TEIA LA SDNR  I+ATL +PV+GWVGFNI G    Q  QM
Sbjct: 308 TEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQM 349