BLASTX nr result

ID: Cornus23_contig00029507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00029507
         (387 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011035612.1| PREDICTED: uncharacterized protein LOC105133...    60   5e-07
emb|CDO98890.1| unnamed protein product [Coffea canephora]             60   5e-07
ref|XP_006489124.1| PREDICTED: uncharacterized protein LOC102628...    59   1e-06
ref|XP_007035524.1| Mitochondrial transcription termination fact...    58   2e-06
emb|CBI37155.3| unnamed protein product [Vitis vinifera]               58   3e-06
ref|XP_002322106.2| hypothetical protein POPTR_0015s04590g [Popu...    57   5e-06
ref|XP_007035535.1| Mitochondrial transcription termination fact...    56   9e-06

>ref|XP_011035612.1| PREDICTED: uncharacterized protein LOC105133351 [Populus
           euphratica]
          Length = 388

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = -1

Query: 240 MFNFIFKTL-PYLRCGVTISPTQKLHFLQHYPXXXXXXXXXXXXXXSNQHSFTVDYLIKS 64
           MF F++K+L  + R   T+SPT KL   QH P               N+ SF   YLI  
Sbjct: 1   MFYFLYKSLLQHGRHAATLSPTHKLFSFQHSPSIITLRFFISNLENPNKQSFAASYLINK 60

Query: 63  CGLPPEKALSASKYVNFETPN 1
            G  PE ALSASK+++F+TP+
Sbjct: 61  FGFSPESALSASKHLSFKTPD 81


>emb|CDO98890.1| unnamed protein product [Coffea canephora]
          Length = 396

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
 Frame = -1

Query: 240 MFNFIFKTLPYLR-----CGVTISPTQKLHFLQHYPXXXXXXXXXXXXXXSNQ----HSF 88
           MF F+ K+   L       G+ IS TQK HF+Q  P              + +    HSF
Sbjct: 1   MFKFVGKSSKILAYEKYCSGIRISTTQKFHFIQLNPLSSSSTQASKNSILNGKIDVPHSF 60

Query: 87  TVDYLIKSCGLPPEKALSASKYVNFETPN 1
           TVDYLIK CGL  + A+SA+K VNF+TP+
Sbjct: 61  TVDYLIKLCGLSEKTAISAAKNVNFKTPD 89


>ref|XP_006489124.1| PREDICTED: uncharacterized protein LOC102628676 [Citrus sinensis]
          Length = 395

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/83 (44%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
 Frame = -1

Query: 240 MFNFIFKTLPYL-RCGVTISPTQ-KLHFLQHYPXXXXXXXXXXXXXXS-NQHSFTVDYLI 70
           MFNF+ K + Y  R  +  +    KL FLQH P              + N HSFTV YL+
Sbjct: 1   MFNFLGKAISYYGRHNIAATRDHHKLRFLQHSPLSMLFSRNCISKSNNANHHSFTVSYLM 60

Query: 69  KSCGLPPEKALSASKYVNFETPN 1
            SCGL  E ALSASKYV  +TP+
Sbjct: 61  NSCGLSLESALSASKYVRLKTPH 83


>ref|XP_007035524.1| Mitochondrial transcription termination factor family protein,
           putative [Theobroma cacao] gi|508714553|gb|EOY06450.1|
           Mitochondrial transcription termination factor family
           protein, putative [Theobroma cacao]
          Length = 388

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = -1

Query: 240 MFNFIFKTLPYLRCGVTISPT-QKLHFLQHYPXXXXXXXXXXXXXXSNQHSFTVDYLIKS 64
           MF F+ +TL + RC VT S   QKL  LQ  P               NQHS  + YLI +
Sbjct: 1   MFYFLSRTLLHRRCTVTGSTAAQKLSLLQKLPFSQFSPKPILAKV--NQHSSVISYLINA 58

Query: 63  CGLPPEKALSASKYVNFET 7
           CGL P+ ALSASK ++FET
Sbjct: 59  CGLSPKSALSASKKLHFET 77


>emb|CBI37155.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 41/94 (43%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
 Frame = -1

Query: 276 KNRTGESLPALSM-FNFIFKTLPYL--RCGVTISPTQKLHFLQHYPXXXXXXXXXXXXXX 106
           KN T   L  L M  NFI K L     R  V    T +LHFL++                
Sbjct: 12  KNPTMSRLLPLQMCINFICKRLGLFPKRWQVVADSTAQLHFLRN-----PTPFIIRSFSA 66

Query: 105 SNQHSFTVDYLIKSCGLPPEKALSASKYVNFETP 4
           SNQHSFTV YL+ SCGL PE A+SAS  ++FE P
Sbjct: 67  SNQHSFTVSYLVNSCGLSPETAISASGKIHFENP 100


>ref|XP_002322106.2| hypothetical protein POPTR_0015s04590g [Populus trichocarpa]
           gi|550321932|gb|EEF06233.2| hypothetical protein
           POPTR_0015s04590g [Populus trichocarpa]
          Length = 388

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
 Frame = -1

Query: 240 MFNFIFKTL-PYLRCGVTISPTQKLHFLQHYPXXXXXXXXXXXXXXSNQHSFTVDYLIKS 64
           MF F++K+L  + R   T+SPT KL   QH P               N+ SF   YLI  
Sbjct: 1   MFYFLYKSLLQHGRHAATLSPTHKLFSFQHSPSIITLRFFISTLENPNKQSFAASYLINK 60

Query: 63  CGLPPEKALSASKYVNFETPN 1
               PE ALSASK+++F+TP+
Sbjct: 61  FVFSPESALSASKHLSFKTPD 81


>ref|XP_007035535.1| Mitochondrial transcription termination factor family protein,
           putative isoform 1 [Theobroma cacao]
           gi|590660947|ref|XP_007035536.1| Mitochondrial
           transcription termination factor family protein,
           putative isoform 1 [Theobroma cacao]
           gi|508714564|gb|EOY06461.1| Mitochondrial transcription
           termination factor family protein, putative isoform 1
           [Theobroma cacao] gi|508714565|gb|EOY06462.1|
           Mitochondrial transcription termination factor family
           protein, putative isoform 1 [Theobroma cacao]
          Length = 395

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 36/80 (45%), Positives = 42/80 (52%)
 Frame = -1

Query: 240 MFNFIFKTLPYLRCGVTISPTQKLHFLQHYPXXXXXXXXXXXXXXSNQHSFTVDYLIKSC 61
           MF  I KTL + R  +T   T KL F                   + Q SFTV YLI +C
Sbjct: 1   MFCSISKTLLHGRDKITAPQTMKL-FCTLRKNPSILSLRLFSTTSNQQQSFTVSYLINTC 59

Query: 60  GLPPEKALSASKYVNFETPN 1
           GL PE AL ASK+VNFETP+
Sbjct: 60  GLSPESALHASKFVNFETPD 79


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