BLASTX nr result

ID: Cornus23_contig00029303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00029303
         (319 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012843543.1| PREDICTED: nuclear pore complex protein NUP6...   121   2e-25

>ref|XP_012843543.1| PREDICTED: nuclear pore complex protein NUP62 isoform X2 [Erythranthe
            guttatus]
          Length = 823

 Score =  121 bits (304), Expect = 2e-25
 Identities = 59/105 (56%), Positives = 84/105 (80%)
 Frame = -1

Query: 319  DITLGSILKSTAAKSAFLELVADAVDRLCTHTLDTLDSNEFQLIQKQIADAATVGFNVEW 140
            DIT GSILKS  AK AFL+LV + V+RL +HTLDTL ++E  +IQK   DAATVGF+V+W
Sbjct: 693  DITKGSILKSIEAKKAFLQLVVEVVERLHSHTLDTLGAHEMHVIQKLTDDAATVGFHVDW 752

Query: 139  LQQRVDKVNAVSKYKLRMMELDELGKQIDAAKKSLMEMEFQQMVL 5
            LQQR+ K+ ++SKY+  +M+L+++ ++I+AAK +L+EME Q M+L
Sbjct: 753  LQQRIKKIVSISKYRDSLMQLNDISEKINAAKIALLEMELQHMIL 797


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