BLASTX nr result

ID: Cornus23_contig00029292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00029292
         (440 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012483246.1| PREDICTED: putative F-box protein At3g23970 ...    49   1e-05
gb|KJB35389.1| hypothetical protein B456_006G112800 [Gossypium r...    49   1e-05

>ref|XP_012483246.1| PREDICTED: putative F-box protein At3g23970 [Gossypium raimondii]
          Length = 399

 Score = 48.9 bits (115), Expect(2) = 1e-05
 Identities = 22/50 (44%), Positives = 29/50 (58%)
 Frame = -2

Query: 292 ASPEGLILCSLQRFRVLHYYVCNPVKNQWFALPKPNNGHVPSSVSFSCKN 143
           AS  GL+LC    +   +YY+CNP+  QW ALPKP       +V F CK+
Sbjct: 130 ASSNGLLLCCETFYWQKNYYICNPLIQQWIALPKPPKAIKSVAVGFICKD 179



 Score = 26.9 bits (58), Expect(2) = 1e-05
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 137 KDGVVHFKIILAIFQKEERATYDRIYIETLSSQTGEWSKSFLTSP 3
           KDG  H+++I   F        + + +ET SS+TG+W  S +  P
Sbjct: 178 KDG--HYEVIR--FPTANYGPSNTLRLETFSSETGKWHCSIVNCP 218


>gb|KJB35389.1| hypothetical protein B456_006G112800 [Gossypium raimondii]
          Length = 396

 Score = 48.9 bits (115), Expect(2) = 1e-05
 Identities = 22/50 (44%), Positives = 29/50 (58%)
 Frame = -2

Query: 292 ASPEGLILCSLQRFRVLHYYVCNPVKNQWFALPKPNNGHVPSSVSFSCKN 143
           AS  GL+LC    +   +YY+CNP+  QW ALPKP       +V F CK+
Sbjct: 127 ASSNGLLLCCETFYWQKNYYICNPLIQQWIALPKPPKAIKSVAVGFICKD 176



 Score = 26.9 bits (58), Expect(2) = 1e-05
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 137 KDGVVHFKIILAIFQKEERATYDRIYIETLSSQTGEWSKSFLTSP 3
           KDG  H+++I   F        + + +ET SS+TG+W  S +  P
Sbjct: 175 KDG--HYEVIR--FPTANYGPSNTLRLETFSSETGKWHCSIVNCP 215


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