BLASTX nr result

ID: Cornus23_contig00028718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00028718
         (578 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011084684.1| PREDICTED: INO80 complex subunit D-like [Ses...    64   7e-08
ref|XP_009760505.1| PREDICTED: INO80 complex subunit D-like [Nic...    64   7e-08
ref|XP_011037036.1| PREDICTED: INO80 complex subunit D-like [Pop...    60   1e-06
emb|CDP04158.1| unnamed protein product [Coffea canephora]             60   1e-06
ref|XP_012066186.1| PREDICTED: INO80 complex subunit D-like [Jat...    59   2e-06
ref|XP_006373197.1| hypothetical protein POPTR_0017s09550g [Popu...    59   2e-06
ref|XP_006372919.1| hypothetical protein POPTR_0017s06230g [Popu...    59   2e-06
ref|XP_006372918.1| hypothetical protein POPTR_0017s06230g [Popu...    59   2e-06
ref|XP_010268295.1| PREDICTED: INO80 complex subunit D isoform X...    58   3e-06
ref|XP_002529751.1| conserved hypothetical protein [Ricinus comm...    57   5e-06
gb|EPS68346.1| hypothetical protein M569_06427, partial [Genlise...    57   5e-06
ref|XP_011014400.1| PREDICTED: INO80 complex subunit D-like [Pop...    57   9e-06
ref|XP_011026382.1| PREDICTED: INO80 complex subunit D [Populus ...    57   9e-06
ref|XP_002310446.1| hypothetical protein POPTR_0007s02190g [Popu...    57   9e-06

>ref|XP_011084684.1| PREDICTED: INO80 complex subunit D-like [Sesamum indicum]
          Length = 288

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 11/87 (12%)
 Frame = -2

Query: 247 SLVGPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE- 74
           S  GPI C KPILRST  S+ PL+ ++  K + +ALKKAGL V STSKLAP   VI+AE 
Sbjct: 201 STTGPILCGKPILRSTVPSYCPLHFQKAEKHMVRALKKAGLNVSSTSKLAPKFHVIIAEY 260

Query: 73  ---------*SCTAGIVDAVEMKQENN 20
                     +  A + +A  +K+ENN
Sbjct: 261 VRQIQQKRRAAQKANLENAEVVKEENN 287


>ref|XP_009760505.1| PREDICTED: INO80 complex subunit D-like [Nicotiana sylvestris]
          Length = 305

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
 Frame = -2

Query: 247 SLVGPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE- 74
           S  GPI C KPILRST  S+  L+ ++  K VT+ALKKAGL V +TSKLAP   VIVAE 
Sbjct: 219 SPTGPILCGKPILRSTVPSYCSLHFQKAEKHVTRALKKAGLNVSNTSKLAPKFHVIVAEY 278

Query: 73  --------*SCTAGIVDAVEMKQENN 20
                    +    I++  E+K+EN+
Sbjct: 279 VSQIQNRRRAAQKAILEITEVKEENS 304


>ref|XP_011037036.1| PREDICTED: INO80 complex subunit D-like [Populus euphratica]
           gi|743883479|ref|XP_011037037.1| PREDICTED: INO80
           complex subunit D-like [Populus euphratica]
           gi|743883483|ref|XP_011037038.1| PREDICTED: INO80
           complex subunit D-like [Populus euphratica]
           gi|743883487|ref|XP_011037039.1| PREDICTED: INO80
           complex subunit D-like [Populus euphratica]
           gi|743883491|ref|XP_011037040.1| PREDICTED: INO80
           complex subunit D-like [Populus euphratica]
          Length = 288

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -2

Query: 238 GPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           GPI C KPILRSTA S   ++L++  K VTQAL+KAGL V S+SKLAP   VIV E
Sbjct: 205 GPITCGKPILRSTAPSLCTIHLQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTE 260


>emb|CDP04158.1| unnamed protein product [Coffea canephora]
          Length = 116

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 238 GPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           GPI C KPILRST  S+  L+ ++  K V +ALKKAGL V STSKLAP   V+VAE
Sbjct: 33  GPILCGKPILRSTVPSYCALHFQKAEKHVARALKKAGLNVSSTSKLAPKFHVVVAE 88


>ref|XP_012066186.1| PREDICTED: INO80 complex subunit D-like [Jatropha curcas]
           gi|643736532|gb|KDP42822.1| hypothetical protein
           JCGZ_23764 [Jatropha curcas]
          Length = 305

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -2

Query: 238 GPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           GPI C KPILRSTA S   ++ ++  K VT+ALKKAGL V S+SKLAP   VIVAE
Sbjct: 222 GPITCGKPILRSTAPSLCSVHFQKAQKHVTRALKKAGLNVSSSSKLAPKFHVIVAE 277


>ref|XP_006373197.1| hypothetical protein POPTR_0017s09550g [Populus trichocarpa]
           gi|550319903|gb|ERP50994.1| hypothetical protein
           POPTR_0017s09550g [Populus trichocarpa]
          Length = 288

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -2

Query: 238 GPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           GPI C KPILRSTA S   +++++  K VTQAL+KAGL V S+SKLAP   VIV E
Sbjct: 205 GPITCGKPILRSTAPSLCTIHVQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTE 260


>ref|XP_006372919.1| hypothetical protein POPTR_0017s06230g [Populus trichocarpa]
           gi|550319567|gb|ERP50716.1| hypothetical protein
           POPTR_0017s06230g [Populus trichocarpa]
          Length = 287

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -2

Query: 238 GPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           GPI C KPILRSTA S   +++++  K VTQAL+KAGL V S+SKLAP   VIV E
Sbjct: 204 GPITCGKPILRSTAPSLCTIHVQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTE 259


>ref|XP_006372918.1| hypothetical protein POPTR_0017s06230g [Populus trichocarpa]
           gi|550319566|gb|ERP50715.1| hypothetical protein
           POPTR_0017s06230g [Populus trichocarpa]
          Length = 269

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -2

Query: 238 GPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           GPI C KPILRSTA S   +++++  K VTQAL+KAGL V S+SKLAP   VIV E
Sbjct: 186 GPITCGKPILRSTAPSLCTIHVQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTE 241


>ref|XP_010268295.1| PREDICTED: INO80 complex subunit D isoform X1 [Nelumbo nucifera]
          Length = 326

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -2

Query: 295 LKMAPTTVKFWLHHCISLVGPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVH 119
           LK  P +   W+    +  GPI C KPILRST  S   ++ ++  K VT+ALKKAGL + 
Sbjct: 225 LKTIPEST-LWVSLPCAQTGPILCGKPILRSTVPSLCMVHFQKAQKHVTRALKKAGLNIS 283

Query: 118 STSKLAP*SRVIVAE 74
           S++KLAP   VIVAE
Sbjct: 284 SSTKLAPKFHVIVAE 298


>ref|XP_002529751.1| conserved hypothetical protein [Ricinus communis]
           gi|223530749|gb|EEF32617.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 314

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -2

Query: 238 GPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           GPI C KPILRS+A S   ++ ++  K VT+ALKKAGL V S+SKLAP   VIVAE
Sbjct: 229 GPITCGKPILRSSAPSLCTVHFQKAQKHVTRALKKAGLNVSSSSKLAPKFHVIVAE 284


>gb|EPS68346.1| hypothetical protein M569_06427, partial [Genlisea aurea]
          Length = 215

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = -2

Query: 247 SLVGPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           S  GPI C KPIL+ST  S+ PL+ ++  K + +ALKKAGL V ST KLAP    ++AE
Sbjct: 141 STTGPILCGKPILKSTVPSYCPLHFQKAEKHMVRALKKAGLNVSSTYKLAPKFHTVIAE 199


>ref|XP_011014400.1| PREDICTED: INO80 complex subunit D-like [Populus euphratica]
          Length = 276

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 238 GPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           GPI C KPILRSTA +   ++ ++  K VTQAL+KAGL V S+SKLAP   VIV E
Sbjct: 208 GPITCGKPILRSTAPALCTVHFQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTE 263


>ref|XP_011026382.1| PREDICTED: INO80 complex subunit D [Populus euphratica]
          Length = 276

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 238 GPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           GPI C KPILRSTA +   ++ ++  K VTQAL+KAGL V S+SKLAP   VIV E
Sbjct: 208 GPITCGKPILRSTAPALCTVHFQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTE 263


>ref|XP_002310446.1| hypothetical protein POPTR_0007s02190g [Populus trichocarpa]
           gi|222853349|gb|EEE90896.1| hypothetical protein
           POPTR_0007s02190g [Populus trichocarpa]
          Length = 276

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -2

Query: 238 GPIFCMKPILRSTASSFRPLYLRRL-KFVTQALKKAGLIVHSTSKLAP*SRVIVAE 74
           GPI C KPILRSTA +   ++ ++  K VTQAL+KAGL V S+SKLAP   VIV E
Sbjct: 208 GPITCGKPILRSTAPALCTVHFQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTE 263


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