BLASTX nr result
ID: Cornus23_contig00028468
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00028468
(297 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009627999.1| PREDICTED: DNA-directed RNA polymerase III s... 140 4e-31
ref|XP_009627995.1| PREDICTED: DNA-directed RNA polymerase III s... 139 6e-31
emb|CDP05190.1| unnamed protein product [Coffea canephora] 139 6e-31
ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III s... 139 1e-30
ref|XP_009767753.1| PREDICTED: DNA-directed RNA polymerase III s... 139 1e-30
ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III s... 139 1e-30
ref|XP_009627989.1| PREDICTED: DNA-directed RNA polymerase III s... 138 2e-30
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s... 137 2e-30
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera] 137 4e-30
ref|XP_011076160.1| PREDICTED: DNA-directed RNA polymerase III s... 136 7e-30
ref|XP_011076159.1| PREDICTED: DNA-directed RNA polymerase III s... 136 7e-30
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s... 135 9e-30
ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III s... 135 1e-29
ref|XP_010035145.1| PREDICTED: DNA-directed RNA polymerase III s... 125 1e-26
gb|KCW46437.1| hypothetical protein EUGRSUZ_K00269 [Eucalyptus g... 125 1e-26
ref|XP_011048723.1| PREDICTED: uncharacterized protein LOC105142... 121 2e-25
ref|XP_011048722.1| PREDICTED: uncharacterized protein LOC105142... 121 2e-25
ref|XP_010649877.1| PREDICTED: DNA-directed RNA polymerase III s... 121 2e-25
ref|XP_010649872.1| PREDICTED: DNA-directed RNA polymerase III s... 121 2e-25
ref|XP_010649876.1| PREDICTED: DNA-directed RNA polymerase III s... 121 2e-25
>ref|XP_009627999.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X3
[Nicotiana tomentosiformis]
Length = 535
Score = 140 bits (353), Expect = 4e-31
Identities = 68/102 (66%), Positives = 82/102 (80%), Gaps = 4/102 (3%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVCECLL+RGT L QI++FTEL +E VR CLLVL+ HNCVQ+FA+ EG FG+A ++IT
Sbjct: 24 KVCECLLQRGTQSLAQIVRFTELSRENVRNCLLVLIHHNCVQAFAVQQEGAFGEAPKVIT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDL----GKECKEIIEGLI 295
+YM LFDNIIH +RFPKFL IVSE L GKEC+EI EGL+
Sbjct: 84 NYMALFDNIIHKLRFPKFLEIVSEVLGEKVGKECEEIFEGLL 125
>ref|XP_009627995.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X2
[Nicotiana tomentosiformis]
Length = 539
Score = 139 bits (351), Expect = 6e-31
Identities = 67/106 (63%), Positives = 83/106 (78%), Gaps = 8/106 (7%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVCECLL+RGT L QI++FTEL +E VR CLLVL+ HNCVQ+FA+ EG FG+A ++IT
Sbjct: 24 KVCECLLQRGTQSLAQIVRFTELSRENVRNCLLVLIHHNCVQAFAVQQEGAFGEAPKVIT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSE--------DLGKECKEIIEGLI 295
+YM LFDNIIH +RFPKFL IVSE ++GKEC+EI EGL+
Sbjct: 84 NYMALFDNIIHKLRFPKFLEIVSEVLGEKVGKEVGKECEEIFEGLL 129
>emb|CDP05190.1| unnamed protein product [Coffea canephora]
Length = 618
Score = 139 bits (351), Expect = 6e-31
Identities = 62/98 (63%), Positives = 79/98 (80%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVCECLLRRGTL L QII+FTEL +E VR CLL L+ NC+Q+F+I EG FG+A +++T
Sbjct: 24 KVCECLLRRGTLTLAQIIRFTELSREIVRHCLLALIHQNCIQAFSIQQEGAFGEAPKVVT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
HYM LFDNIIHHMRFPKF+ IV ++LG E +++ E L+
Sbjct: 84 HYMALFDNIIHHMRFPKFIAIVKDELGGESEKVFEALL 121
>ref|XP_010662743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X2
[Vitis vinifera]
Length = 429
Score = 139 bits (349), Expect = 1e-30
Identities = 63/98 (64%), Positives = 80/98 (81%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVC+CLLR+GTL L +I+FTEL + V+ C+LVL+QHNCVQ+FAI E GFG+A R++T
Sbjct: 24 KVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQEVGFGEAPRVVT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YM LF NI+H MRF KFL IVSE+L KEC+EI+EGL+
Sbjct: 84 QYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLL 121
>ref|XP_009767753.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
[Nicotiana sylvestris]
Length = 539
Score = 139 bits (349), Expect = 1e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 8/106 (7%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVCECLL+RGT L QI++FTEL +E VR CLLVL+ HNCVQ+FA+ EG FG+A ++IT
Sbjct: 24 KVCECLLQRGTQSLAQIVRFTELSRENVRNCLLVLIHHNCVQAFAVQQEGAFGEAPKVIT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDL--------GKECKEIIEGLI 295
+YM LFDNIIH +RFPKFL IVSE L GKEC+EI EGL+
Sbjct: 84 NYMALFDNIIHKLRFPKFLEIVSEVLGEKVGKEGGKECEEIFEGLL 129
>ref|XP_010662742.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Vitis vinifera] gi|302143859|emb|CBI22720.3| unnamed
protein product [Vitis vinifera]
Length = 524
Score = 139 bits (349), Expect = 1e-30
Identities = 63/98 (64%), Positives = 80/98 (81%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVC+CLLR+GTL L +I+FTEL + V+ C+LVL+QHNCVQ+FAI E GFG+A R++T
Sbjct: 24 KVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQEVGFGEAPRVVT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YM LF NI+H MRF KFL IVSE+L KEC+EI+EGL+
Sbjct: 84 QYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLL 121
>ref|XP_009627989.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
[Nicotiana tomentosiformis]
Length = 543
Score = 138 bits (347), Expect = 2e-30
Identities = 67/110 (60%), Positives = 83/110 (75%), Gaps = 12/110 (10%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVCECLL+RGT L QI++FTEL +E VR CLLVL+ HNCVQ+FA+ EG FG+A ++IT
Sbjct: 24 KVCECLLQRGTQSLAQIVRFTELSRENVRNCLLVLIHHNCVQAFAVQQEGAFGEAPKVIT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSE------------DLGKECKEIIEGLI 295
+YM LFDNIIH +RFPKFL IVSE ++GKEC+EI EGL+
Sbjct: 84 NYMALFDNIIHKLRFPKFLEIVSEVLGEKVGKEVGKEVGKECEEIFEGLL 133
>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Solanum
lycopersicum]
Length = 525
Score = 137 bits (346), Expect = 2e-30
Identities = 63/98 (64%), Positives = 80/98 (81%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVC+CLLRRGT L Q++ TEL ++ V+ CLLVL+ HNCVQ+FAI GGFG+ ++IIT
Sbjct: 24 KVCDCLLRRGTQTLHQVVSSTELSRKNVKNCLLVLIHHNCVQAFAIRQPGGFGEEAKIIT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YM LFDNIIH +RFPKF+ IVSE+LGKEC+EI+E L+
Sbjct: 84 QYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWLL 121
>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
Length = 721
Score = 137 bits (344), Expect = 4e-30
Identities = 62/98 (63%), Positives = 79/98 (80%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVC+CLLR+GT L +I+FTEL + V+ C+LVL+QHNCVQ+FAI E GFG+A R++T
Sbjct: 24 KVCDCLLRKGTXTLASVIRFTELPPQQVKSCILVLIQHNCVQAFAIQQEVGFGEAPRVVT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YM LF NI+H MRF KFL IVSE+L KEC+EI+EGL+
Sbjct: 84 QYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLL 121
>ref|XP_011076160.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X2
[Sesamum indicum]
Length = 435
Score = 136 bits (342), Expect = 7e-30
Identities = 67/98 (68%), Positives = 77/98 (78%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVCECLLRRGTL L QII+FTEL +E V CL VL+ NCVQ+FAI EG FG+A RIIT
Sbjct: 24 KVCECLLRRGTLTLAQIIRFTELSRENVINCLRVLIHQNCVQAFAIQQEGAFGEAPRIIT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YM LFDN+IH MR PKF+ IVSE+LGK+C I +GLI
Sbjct: 84 QYMALFDNMIHKMRAPKFMQIVSEELGKDCLGIFQGLI 121
>ref|XP_011076159.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 isoform X1
[Sesamum indicum]
Length = 525
Score = 136 bits (342), Expect = 7e-30
Identities = 67/98 (68%), Positives = 77/98 (78%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVCECLLRRGTL L QII+FTEL +E V CL VL+ NCVQ+FAI EG FG+A RIIT
Sbjct: 24 KVCECLLRRGTLTLAQIIRFTELSRENVINCLRVLIHQNCVQAFAIQQEGAFGEAPRIIT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YM LFDN+IH MR PKF+ IVSE+LGK+C I +GLI
Sbjct: 84 QYMALFDNMIHKMRAPKFMQIVSEELGKDCLGIFQGLI 121
>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like
[Solanum tuberosum]
Length = 525
Score = 135 bits (341), Expect = 9e-30
Identities = 61/98 (62%), Positives = 78/98 (79%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVC+CLLRRGT L Q++ TEL + V+ CLLVL+ HNCVQ+FA+ GGFG+ ++IT
Sbjct: 24 KVCDCLLRRGTQTLYQVVSSTELTRTNVKNCLLVLIHHNCVQAFALQQPGGFGEEPKVIT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YM LFDNIIH +RFPKF+ IVSE++GKEC+EI EGL+
Sbjct: 84 QYMALFDNIIHKLRFPKFIEIVSEEMGKECEEIFEGLL 121
>ref|XP_010251272.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo
nucifera]
Length = 531
Score = 135 bits (340), Expect = 1e-29
Identities = 63/97 (64%), Positives = 78/97 (80%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVCECLLR+G+L L I +FTEL + V+ CLLVL+QHNCVQ+F+I EGG G A ++IT
Sbjct: 24 KVCECLLRKGSLTLADITRFTELPQAQVKNCLLVLIQHNCVQAFSIQIEGGVGAAPKVIT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGL 292
Y +FDNI+H MRFPKFL IVSE+L KEC+EI+EGL
Sbjct: 84 QYTAIFDNILHRMRFPKFLTIVSEELDKECEEILEGL 120
>ref|XP_010035145.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Eucalyptus
grandis]
Length = 522
Score = 125 bits (315), Expect = 1e-26
Identities = 57/98 (58%), Positives = 73/98 (74%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVCECLLRRG L I++FTE+ V+ CLLVL+Q NCVQ+F++ H GG G SR T
Sbjct: 26 KVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVLIQQNCVQAFSVEHPGGVGDTSRRST 85
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
Y+ LFDNIIH MRFPKF+ +VS++L KEC E+ +GL+
Sbjct: 86 EYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQGLL 123
>gb|KCW46437.1| hypothetical protein EUGRSUZ_K00269 [Eucalyptus grandis]
gi|629079993|gb|KCW46438.1| hypothetical protein
EUGRSUZ_K00269 [Eucalyptus grandis]
Length = 554
Score = 125 bits (315), Expect = 1e-26
Identities = 57/98 (58%), Positives = 73/98 (74%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVCECLLRRG L I++FTE+ V+ CLLVL+Q NCVQ+F++ H GG G SR T
Sbjct: 58 KVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVLIQQNCVQAFSVEHPGGVGDTSRRST 117
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
Y+ LFDNIIH MRFPKF+ +VS++L KEC E+ +GL+
Sbjct: 118 EYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQGLL 155
>ref|XP_011048723.1| PREDICTED: uncharacterized protein LOC105142676 isoform X2 [Populus
euphratica]
Length = 430
Score = 121 bits (303), Expect = 2e-25
Identities = 52/98 (53%), Positives = 77/98 (78%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVC+CLL++G LPL +I+++TEL + VR CLLVL+QHNC+Q F + EGGFG+ +++ +
Sbjct: 24 KVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQHNCLQPFLLEEEGGFGEVNKVSS 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YMVLFDN++H +RF KF+ IVS++ K C ++IE L+
Sbjct: 84 LYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETLL 121
>ref|XP_011048722.1| PREDICTED: uncharacterized protein LOC105142676 isoform X1 [Populus
euphratica]
Length = 525
Score = 121 bits (303), Expect = 2e-25
Identities = 52/98 (53%), Positives = 77/98 (78%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVC+CLL++G LPL +I+++TEL + VR CLLVL+QHNC+Q F + EGGFG+ +++ +
Sbjct: 24 KVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQHNCLQPFLLEEEGGFGEVNKVSS 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YMVLFDN++H +RF KF+ IVS++ K C ++IE L+
Sbjct: 84 LYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETLL 121
>ref|XP_010649877.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
isoform X3 [Vitis vinifera]
Length = 513
Score = 121 bits (303), Expect = 2e-25
Identities = 54/98 (55%), Positives = 74/98 (75%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVC+CLLR+GTL L I++ +L + V+ L VL+QHNCVQ+FA+ HEGG G+ ++T
Sbjct: 24 KVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQHNCVQAFAMEHEGGCGEGPVVVT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YM+LFDNI+H MRFPK L IVS++L KEC+E+ E +
Sbjct: 84 QYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAFL 121
>ref|XP_010649872.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
isoform X1 [Vitis vinifera]
gi|731389123|ref|XP_010649873.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC3-like isoform X1 [Vitis
vinifera] gi|731389125|ref|XP_010649874.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC3-like
isoform X1 [Vitis vinifera]
gi|731389127|ref|XP_010649875.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC3-like isoform X1 [Vitis
vinifera]
Length = 524
Score = 121 bits (303), Expect = 2e-25
Identities = 54/98 (55%), Positives = 74/98 (75%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVC+CLLR+GTL L I++ +L + V+ L VL+QHNCVQ+FA+ HEGG G+ ++T
Sbjct: 24 KVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQHNCVQAFAMEHEGGCGEGPVVVT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YM+LFDNI+H MRFPK L IVS++L KEC+E+ E +
Sbjct: 84 QYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAFL 121
>ref|XP_010649876.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
isoform X2 [Vitis vinifera] gi|297737009|emb|CBI26210.3|
unnamed protein product [Vitis vinifera]
Length = 517
Score = 121 bits (303), Expect = 2e-25
Identities = 54/98 (55%), Positives = 74/98 (75%)
Frame = +2
Query: 2 KVCECLLRRGTLPLPQIIQFTELEKETVRCCLLVLLQHNCVQSFAILHEGGFGKASRIIT 181
KVC+CLLR+GTL L I++ +L + V+ L VL+QHNCVQ+FA+ HEGG G+ ++T
Sbjct: 24 KVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQHNCVQAFAMEHEGGCGEGPVVVT 83
Query: 182 HYMVLFDNIIHHMRFPKFLVIVSEDLGKECKEIIEGLI 295
YM+LFDNI+H MRFPK L IVS++L KEC+E+ E +
Sbjct: 84 QYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAFL 121