BLASTX nr result

ID: Cornus23_contig00028360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00028360
         (548 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007043097.1| Pectin lyase-like superfamily protein isofor...    60   8e-07
ref|XP_007043095.1| Pectin lyase-like superfamily protein isofor...    60   8e-07
ref|XP_010645672.1| PREDICTED: exopolygalacturonase [Vitis vinif...    59   1e-06

>ref|XP_007043097.1| Pectin lyase-like superfamily protein isoform 3 [Theobroma cacao]
           gi|508707032|gb|EOX98928.1| Pectin lyase-like
           superfamily protein isoform 3 [Theobroma cacao]
          Length = 378

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +2

Query: 2   SRSLIGTGDDCISVGQGNSKVTITSISCG 88
           SRSLIGTGDDCIS+GQGNS+VTITSISCG
Sbjct: 193 SRSLIGTGDDCISIGQGNSQVTITSISCG 221


>ref|XP_007043095.1| Pectin lyase-like superfamily protein isoform 1 [Theobroma cacao]
           gi|590688970|ref|XP_007043096.1| Pectin lyase-like
           superfamily protein isoform 1 [Theobroma cacao]
           gi|508707030|gb|EOX98926.1| Pectin lyase-like
           superfamily protein isoform 1 [Theobroma cacao]
           gi|508707031|gb|EOX98927.1| Pectin lyase-like
           superfamily protein isoform 1 [Theobroma cacao]
          Length = 429

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +2

Query: 2   SRSLIGTGDDCISVGQGNSKVTITSISCG 88
           SRSLIGTGDDCIS+GQGNS+VTITSISCG
Sbjct: 244 SRSLIGTGDDCISIGQGNSQVTITSISCG 272


>ref|XP_010645672.1| PREDICTED: exopolygalacturonase [Vitis vinifera]
          Length = 337

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +2

Query: 2   SRSLIGTGDDCISVGQGNSKVTITSISCG 88
           SRSLIGTGDDCISVGQGNS+VTITSI+CG
Sbjct: 152 SRSLIGTGDDCISVGQGNSQVTITSITCG 180


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