BLASTX nr result
ID: Cornus23_contig00028324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00028324
(327 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 113 6e-23
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii] 111 2e-22
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ... 86 1e-14
ref|NP_001175213.1| Os07g0500000 [Oryza sativa Japonica Group] g... 85 2e-14
ref|XP_010656794.1| PREDICTED: uncharacterized protein LOC104880... 84 3e-14
ref|XP_010265970.1| PREDICTED: uncharacterized protein LOC104603... 83 9e-14
ref|XP_010263725.1| PREDICTED: uncharacterized protein LOC104601... 83 9e-14
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 82 1e-13
emb|CAN69647.1| hypothetical protein VITISV_022133 [Vitis vinifera] 82 1e-13
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 82 1e-13
ref|XP_009348351.1| PREDICTED: uncharacterized protein LOC103939... 82 2e-13
ref|XP_008460441.1| PREDICTED: uncharacterized protein LOC103499... 81 3e-13
ref|XP_010534024.1| PREDICTED: uncharacterized protein LOC104809... 80 6e-13
ref|XP_008654354.1| PREDICTED: uncharacterized protein LOC100193... 80 8e-13
ref|XP_008654353.1| PREDICTED: uncharacterized protein LOC100193... 80 8e-13
ref|XP_008654352.1| PREDICTED: uncharacterized protein LOC100193... 80 8e-13
ref|XP_008651726.1| PREDICTED: hypothetical protein isoform X1 [... 80 8e-13
ref|XP_008674202.1| PREDICTED: retrovirus-related Pol polyprotei... 80 8e-13
ref|XP_008674201.1| PREDICTED: uncharacterized protein LOC100279... 80 8e-13
ref|XP_008669041.1| PREDICTED: uncharacterized protein LOC103646... 80 8e-13
>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 113 bits (282), Expect = 6e-23
Identities = 57/96 (59%), Positives = 69/96 (71%), Gaps = 3/96 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYSE--- 171
P+ +S +SPFE +G DY +VFGCT FVL P V+R KLS RS ICVFLGY E
Sbjct: 681 PSSHSSGLSPFEKLYGHVPDYSSFRVFGCTYFVLHPHVERNKLSSRSAICVFLGYGEGKK 740
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFFSIPASPNTL 279
GY +DP+ QKLYVS HVVFLE IPFFSIP++ ++L
Sbjct: 741 GYRCFDPITQKLYVSHHVVFLEHIPFFSIPSTTHSL 776
>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
Length = 732
Score = 111 bits (277), Expect = 2e-22
Identities = 57/97 (58%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYSE--- 171
P+ V S +SPFE + DY LKVFG TCFVL P+V+R+KLS RS ICVFLGY +
Sbjct: 197 PSSVISGLSPFEKLYASVPDYSSLKVFGSTCFVLRPQVERSKLSSRSAICVFLGYGDGQK 256
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFFSIPASPNTLN 282
GY YDP A+KLYVSRHVVFLE IPF+S + + N
Sbjct: 257 GYRCYDPHARKLYVSRHVVFLEHIPFYSFSSESSITN 293
>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group] gi|78708691|gb|ABB47666.1|
retrotransposon protein, putative, unclassified,
expressed [Oryza sativa Japonica Group]
Length = 1682
Score = 85.5 bits (210), Expect = 1e-14
Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
Frame = +1
Query: 25 SPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---EGYCYYDPV 195
SP E+ FG P Y L+VFGCTC+VLL +RTKL+ +SV CVFLGYS +GY YDP
Sbjct: 533 SPGEVLFGSPPRYDHLRVFGCTCYVLLAPRERTKLTAQSVECVFLGYSLEHKGYRCYDPS 592
Query: 196 AQKLYVSRHVVFLERIPFF----SIPASP-NTLNY 285
A+++ +SR V F E PFF + P+SP N++++
Sbjct: 593 ARRIRISRDVTFDENKPFFYSSTNQPSSPENSISF 627
>ref|NP_001175213.1| Os07g0500000 [Oryza sativa Japonica Group]
gi|255677790|dbj|BAH93941.1| Os07g0500000 [Oryza sativa
Japonica Group]
Length = 662
Score = 84.7 bits (208), Expect = 2e-14
Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Frame = +1
Query: 25 SPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---EGYCYYDPV 195
SP E+ FG P Y L+VFGCTC+VLL +RTKL+ +SV CVFLGYS +GY YDP
Sbjct: 311 SPGEMLFGSPPRYDHLRVFGCTCYVLLAPRERTKLTAQSVECVFLGYSLEHKGYRCYDPS 370
Query: 196 AQKLYVSRHVVFLERIPFF 252
A+++ +SR V F E PFF
Sbjct: 371 ARRIRISRDVTFDENKPFF 389
>ref|XP_010656794.1| PREDICTED: uncharacterized protein LOC104880778 [Vitis vinifera]
Length = 934
Score = 84.3 bits (207), Expect = 3e-14
Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYSE--- 171
P+VV + +P+E FG P DY L+ FG CFVLL + KL PRS +C FLGY E
Sbjct: 500 PSVVIHNQTPYERLFGSPPDYHHLRSFGSACFVLLQPHEHNKLEPRSRLCCFLGYGETQK 559
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFFSI 258
GY YDPV+ +L+VSR+VVF E F +
Sbjct: 560 GYRCYDPVSHRLHVSRNVVFWEHRLFVEL 588
>ref|XP_010265970.1| PREDICTED: uncharacterized protein LOC104603606 [Nelumbo nucifera]
Length = 778
Score = 82.8 bits (203), Expect = 9e-14
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
P+ V +ISP+E +G DY L+VFGCTCFVLL + TKL P++ +C FL Y +
Sbjct: 481 PSPVIGNISPYERLYGHCPDYQSLRVFGCTCFVLLQPHEYTKLEPKARLCCFLRYGIEHK 540
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFFSI 258
GY +DP++Q+L +SRHV F E F S+
Sbjct: 541 GYWCWDPLSQRLRISRHVTFWEHKMFSSL 569
>ref|XP_010263725.1| PREDICTED: uncharacterized protein LOC104601921 [Nelumbo nucifera]
Length = 670
Score = 82.8 bits (203), Expect = 9e-14
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
P+ V +ISP+E +G LDY L VFGC CFVLL + TK P++ +C FLGY +
Sbjct: 454 PSPVIGNISPYERLYGHCLDYQSLHVFGCACFVLLQPHEHTKSEPKARLCCFLGYGIEHK 513
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFFSI 258
GY +DP++Q+L +SRHV F E F S+
Sbjct: 514 GYRCWDPLSQQLRISRHVTFWEHKIFSSL 542
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 82.4 bits (202), Expect = 1e-13
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
PT V + SPF++ FGK +Y + K+FGC C+ + ++ KLS RS CVFLGYS +
Sbjct: 719 PTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHK 778
Query: 172 GYCYYDPVAQKLYVSRHVVFLERI-PFFSIP 261
GY +P+ +LYV+RHVVF E + PF S P
Sbjct: 779 GYMCLNPLTGRLYVTRHVVFHETVFPFQSTP 809
>emb|CAN69647.1| hypothetical protein VITISV_022133 [Vitis vinifera]
Length = 2655
Score = 82.4 bits (202), Expect = 1e-13
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYSE--- 171
P+ V + +P+E FG P DY L+ FG CFVLL + KL PRS +C FLGY E
Sbjct: 1973 PSAVIHNQTPYERLFGSPPDYHHLRSFGSXCFVLLQPHEHNKLEPRSRLCCFLGYGETQK 2032
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFFSI 258
GY YDPV+ +L+VSR+VVF E F +
Sbjct: 2033 GYRCYDPVSHRLHVSRNVVFWEHRLFVEL 2061
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 82.4 bits (202), Expect = 1e-13
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
PT V + SPF++ FGK +Y + K+FGC C+ + ++ KLS RS CVFLGYS +
Sbjct: 528 PTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHK 587
Query: 172 GYCYYDPVAQKLYVSRHVVFLERI-PFFSIP 261
GY +P+ +LYV+RHVVF E + PF S P
Sbjct: 588 GYMCLNPLTGRLYVTRHVVFHETVFPFQSTP 618
>ref|XP_009348351.1| PREDICTED: uncharacterized protein LOC103939989 [Pyrus x
bretschneideri]
Length = 911
Score = 81.6 bits (200), Expect = 2e-13
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
PT V +S SPFE+ G+ D ++FGCTC+V + R KL PR++ CVF+GYS +
Sbjct: 691 PTRVLNSKSPFEIMKGRTADLTHFRIFGCTCYVHVQANHRDKLEPRAIKCVFMGYSSSQK 750
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFFSIPASPNT 276
GY Y+P KL VSR V F E +PFF+ SPN+
Sbjct: 751 GYKCYNPHTGKLVVSRDVRFDELVPFFN-NHSPNS 784
>ref|XP_008460441.1| PREDICTED: uncharacterized protein LOC103499253 [Cucumis melo]
Length = 702
Score = 81.3 bits (199), Expect = 3e-13
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
P+ V +ISPFE +G PL+Y LK FGC CFVLL + TKL PR + FLGY +
Sbjct: 497 PSSVLQNISPFEKLYGNPLNYSNLKTFGCACFVLLHPHEHTKLEPRVHLYYFLGYGTEHK 556
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPF 249
G+ +DP++ +L +SRHV F E F
Sbjct: 557 GFHCWDPLSNRLRISRHVTFWEHTMF 582
>ref|XP_010534024.1| PREDICTED: uncharacterized protein LOC104809678 [Tarenaya
hassleriana]
Length = 2364
Score = 80.1 bits (196), Expect = 6e-13
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
PT + + SPFE+ L+VFGC C+V +P+ +R KL P+SV CVFLGYS +
Sbjct: 559 PTKILNDKSPFEVLNDTQPSLDFLRVFGCLCYVFVPEDNRNKLDPKSVKCVFLGYSTKKK 618
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFF 252
GY Y P +KL+VSR V FLE + +F
Sbjct: 619 GYKCYQPETRKLFVSRDVKFLEDVGYF 645
Score = 80.1 bits (196), Expect = 6e-13
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
PT + + SPFE+ L+VFGC C+V +P+ +R KL P+SV CVFLGYS +
Sbjct: 1453 PTKILNDKSPFEVLNDTQPSLDFLRVFGCLCYVFVPEDNRNKLDPKSVKCVFLGYSTKKK 1512
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFF 252
GY Y P +KL+VSR V FLE + +F
Sbjct: 1513 GYKCYQPETRKLFVSRDVKFLEDVGYF 1539
>ref|XP_008654354.1| PREDICTED: uncharacterized protein LOC100193261 isoform X3 [Zea
mays]
Length = 721
Score = 79.7 bits (195), Expect = 8e-13
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
P+ S +P E+ FG P Y L+VFGCTC+VLL +RTKL+ +SV CVFLGYS +
Sbjct: 495 PSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 554
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFF 252
GY YD ++++ +SR V F E PFF
Sbjct: 555 GYRCYDSSSRRMRISRDVSFNENRPFF 581
>ref|XP_008654353.1| PREDICTED: uncharacterized protein LOC100193261 isoform X2 [Zea
mays]
Length = 725
Score = 79.7 bits (195), Expect = 8e-13
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
P+ S +P E+ FG P Y L+VFGCTC+VLL +RTKL+ +SV CVFLGYS +
Sbjct: 499 PSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 558
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFF 252
GY YD ++++ +SR V F E PFF
Sbjct: 559 GYRCYDSSSRRMRISRDVSFNENRPFF 585
>ref|XP_008654352.1| PREDICTED: uncharacterized protein LOC100193261 isoform X1 [Zea
mays]
Length = 761
Score = 79.7 bits (195), Expect = 8e-13
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
P+ S +P E+ FG P Y L+VFGCTC+VLL +RTKL+ +SV CVFLGYS +
Sbjct: 535 PSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 594
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFF 252
GY YD ++++ +SR V F E PFF
Sbjct: 595 GYRCYDSSSRRMRISRDVSFNENRPFF 621
>ref|XP_008651726.1| PREDICTED: hypothetical protein isoform X1 [Zea mays]
Length = 989
Score = 79.7 bits (195), Expect = 8e-13
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
P+ S +P E+ FG P Y L+VFGCTC+VLL +RTKL+ +SV CVFLGYS +
Sbjct: 269 PSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 328
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFF 252
GY YD ++++ +SR V F E PFF
Sbjct: 329 GYRCYDSSSRRMRISRDVSFNENRPFF 355
>ref|XP_008674202.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Zea mays]
Length = 756
Score = 79.7 bits (195), Expect = 8e-13
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
P+ S +P E+ FG P Y L+VFGCTC+VLL +RTKL+ +SV CVFLGYS +
Sbjct: 277 PSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 336
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFF 252
GY YD ++++ +SR V F E PFF
Sbjct: 337 GYRCYDSSSRRMRISRDVSFNENRPFF 363
>ref|XP_008674201.1| PREDICTED: uncharacterized protein LOC100279087 isoform X1 [Zea mays]
Length = 1376
Score = 79.7 bits (195), Expect = 8e-13
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
P+ S +P E+ FG P Y L+VFGCTC+VLL +RTKL+ +SV CVFLGYS +
Sbjct: 944 PSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 1003
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFF 252
GY YD ++++ +SR V F E PFF
Sbjct: 1004 GYRCYDSSSRRMRISRDVSFNENRPFF 1030
>ref|XP_008669041.1| PREDICTED: uncharacterized protein LOC103646095 [Zea mays]
Length = 704
Score = 79.7 bits (195), Expect = 8e-13
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +1
Query: 1 PTVVTSSISPFELQFGKPLDYFLLKVFGCTCFVLLPKVDRTKLSPRSVICVFLGYS---E 171
P+ S +P E+ FG P Y L+VFGCTC+VLL +RTKL+ +SV CVFLGYS +
Sbjct: 566 PSSKLSGKTPGEVLFGTPPRYDHLRVFGCTCYVLLSPRERTKLTAQSVECVFLGYSPEHK 625
Query: 172 GYCYYDPVAQKLYVSRHVVFLERIPFF 252
GY YD ++++ +SR V F E PFF
Sbjct: 626 GYRCYDASSRRMRISRDVSFNENRPFF 652