BLASTX nr result
ID: Cornus23_contig00028271
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00028271
(260 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009625289.1| PREDICTED: pentatricopeptide repeat-containi... 79 4e-13
ref|XP_009625290.1| PREDICTED: pentatricopeptide repeat-containi... 79 4e-13
ref|XP_009773981.1| PREDICTED: pentatricopeptide repeat-containi... 77 9e-13
ref|XP_009797944.1| PREDICTED: pentatricopeptide repeat-containi... 77 9e-13
ref|XP_009773982.1| PREDICTED: pentatricopeptide repeat-containi... 77 9e-13
ref|XP_010686658.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-12
ref|XP_010271319.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_009344956.1| PREDICTED: pentatricopeptide repeat-containi... 72 7e-12
ref|XP_008349382.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-12
ref|XP_006373596.1| hypothetical protein POPTR_0016s01140g [Popu... 75 1e-11
ref|XP_007212726.1| hypothetical protein PRUPE_ppa018986mg, part... 71 1e-11
gb|EPS71808.1| hypothetical protein M569_02948, partial [Genlise... 74 2e-11
ref|XP_010647234.1| PREDICTED: pentatricopeptide repeat-containi... 75 2e-11
emb|CBI38481.3| unnamed protein product [Vitis vinifera] 75 2e-11
emb|CDP17864.1| unnamed protein product [Coffea canephora] 74 4e-11
ref|XP_007026296.1| Tetratricopeptide repeat-like superfamily pr... 71 4e-11
ref|XP_008440079.1| PREDICTED: pentatricopeptide repeat-containi... 72 5e-11
ref|XP_002520501.1| pentatricopeptide repeat-containing protein,... 74 5e-11
ref|XP_012849237.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-11
gb|EYU27680.1| hypothetical protein MIMGU_mgv1a022067mg, partial... 69 6e-11
>ref|XP_009625289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
isoform X1 [Nicotiana tomentosiformis]
Length = 545
Score = 78.6 bits (192), Expect(2) = 4e-13
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS P DG+LVF KSL++NVITWT LISGYGQNGR+ + LE F
Sbjct: 300 MDMYFKCSCPSDGYLVFSKSLERNVITWTALISGYGQNGRIKDVLESF 347
Score = 22.3 bits (46), Expect(2) = 4e-13
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 87 ATLEQGKQAH 116
A LEQGKQAH
Sbjct: 272 AVLEQGKQAH 281
>ref|XP_009625290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
isoform X2 [Nicotiana tomentosiformis]
Length = 308
Score = 78.6 bits (192), Expect(2) = 4e-13
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS P DG+LVF KSL++NVITWT LISGYGQNGR+ + LE F
Sbjct: 63 MDMYFKCSCPSDGYLVFSKSLERNVITWTALISGYGQNGRIKDVLESF 110
Score = 22.3 bits (46), Expect(2) = 4e-13
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 87 ATLEQGKQAH 116
A LEQGKQAH
Sbjct: 35 AVLEQGKQAH 44
>ref|XP_009773981.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
isoform X1 [Nicotiana sylvestris]
Length = 546
Score = 77.4 bits (189), Expect(2) = 9e-13
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS P DG+LVF KSL++NVITWT LISGYGQNGR+ + LE F
Sbjct: 301 MDMYFKCSCPSDGYLVFCKSLERNVITWTALISGYGQNGRIKDVLESF 348
Score = 22.3 bits (46), Expect(2) = 9e-13
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 87 ATLEQGKQAH 116
A LEQGKQAH
Sbjct: 273 AVLEQGKQAH 282
>ref|XP_009797944.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like, partial [Nicotiana sylvestris]
Length = 495
Score = 77.4 bits (189), Expect(2) = 9e-13
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS P DG+LVF KSL++NVITWT LISGYGQNGR+ + LE F
Sbjct: 165 MDMYFKCSCPSDGYLVFCKSLERNVITWTALISGYGQNGRIKDVLESF 212
Score = 22.3 bits (46), Expect(2) = 9e-13
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 87 ATLEQGKQAH 116
A LEQGKQAH
Sbjct: 137 AVLEQGKQAH 146
>ref|XP_009773982.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
isoform X2 [Nicotiana sylvestris]
Length = 320
Score = 77.4 bits (189), Expect(2) = 9e-13
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS P DG+LVF KSL++NVITWT LISGYGQNGR+ + LE F
Sbjct: 75 MDMYFKCSCPSDGYLVFCKSLERNVITWTALISGYGQNGRIKDVLESF 122
Score = 22.3 bits (46), Expect(2) = 9e-13
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 87 ATLEQGKQAH 116
A LEQGKQAH
Sbjct: 47 AVLEQGKQAH 56
>ref|XP_010686658.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
[Beta vulgaris subsp. vulgaris]
Length = 620
Score = 74.3 bits (181), Expect(2) = 2e-12
Identities = 34/48 (70%), Positives = 36/48 (75%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS DGH VF KS +KNVITWT LI GYG NGR+ E LELF
Sbjct: 294 MDMYFKCSCVSDGHQVFSKSSEKNVITWTALICGYGHNGRIAEVLELF 341
Score = 24.3 bits (51), Expect(2) = 2e-12
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 87 ATLEQGKQAHG 119
A LEQGKQAHG
Sbjct: 266 ALLEQGKQAHG 276
>ref|XP_010271319.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
[Nelumbo nucifera]
Length = 439
Score = 76.6 bits (187), Expect(2) = 3e-12
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +1
Query: 118 DMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
DMY KCS+P DGH VFDK+ ++NV+TWT LISGYGQ+GRV E L+LF
Sbjct: 195 DMYFKCSSPHDGHRVFDKTSERNVVTWTALISGYGQHGRVNEVLDLF 241
Score = 21.2 bits (43), Expect(2) = 3e-12
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 87 ATLEQGKQAH 116
ATLEQGK+ H
Sbjct: 166 ATLEQGKRVH 175
>ref|XP_009344956.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like isoform X1 [Pyrus x bretschneideri]
Length = 540
Score = 72.0 bits (175), Expect(2) = 7e-12
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS+ DGH VFD S ++ ITWT LISGYGQ+GRV+E L LF
Sbjct: 294 MDMYFKCSDISDGHRVFDTSQNRKAITWTALISGYGQHGRVVEVLHLF 341
Score = 24.6 bits (52), Expect(2) = 7e-12
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 87 ATLEQGKQAHG 119
ATLE GKQAHG
Sbjct: 266 ATLEHGKQAHG 276
>ref|XP_008349382.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Malus domestica]
Length = 298
Score = 72.0 bits (175), Expect(2) = 8e-12
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS+ DGH VFD S ++N ITWT LISGYGQ+G V+E L LF
Sbjct: 219 MDMYFKCSDISDGHRVFDTSQNRNAITWTALISGYGQHGXVVEVLNLF 266
Score = 24.6 bits (52), Expect(2) = 8e-12
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 87 ATLEQGKQAHG 119
ATLE GKQAHG
Sbjct: 191 ATLEHGKQAHG 201
>ref|XP_006373596.1| hypothetical protein POPTR_0016s01140g [Populus trichocarpa]
gi|550320530|gb|ERP51393.1| hypothetical protein
POPTR_0016s01140g [Populus trichocarpa]
Length = 509
Score = 75.5 bits (184), Expect(2) = 1e-11
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS+ DGHLVFDKS ++NV+TWT+LISGYG +GRV E +E F
Sbjct: 263 MDMYFKCSSLSDGHLVFDKSSNRNVVTWTSLISGYGHHGRVSEVIESF 310
Score = 20.8 bits (42), Expect(2) = 1e-11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 87 ATLEQGKQAH 116
ATLE GK+AH
Sbjct: 235 ATLEHGKRAH 244
>ref|XP_007212726.1| hypothetical protein PRUPE_ppa018986mg, partial [Prunus persica]
gi|462408591|gb|EMJ13925.1| hypothetical protein
PRUPE_ppa018986mg, partial [Prunus persica]
Length = 397
Score = 71.2 bits (173), Expect(2) = 1e-11
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS+ CDG VF+ ++N ITWT LISGYGQ+GRV+E L++F
Sbjct: 148 MDMYFKCSDLCDGQRVFNTCQNRNAITWTALISGYGQHGRVVEVLDIF 195
Score = 24.6 bits (52), Expect(2) = 1e-11
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 87 ATLEQGKQAHG 119
ATLE GKQAHG
Sbjct: 120 ATLEHGKQAHG 130
>gb|EPS71808.1| hypothetical protein M569_02948, partial [Genlisea aurea]
Length = 440
Score = 74.3 bits (181), Expect(2) = 2e-11
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS+ DGH VFDKSLD+NV+TWT+LI GYG +GRV + LE F
Sbjct: 193 MDMYFKCSSLSDGHRVFDKSLDRNVVTWTSLICGYGLHGRVSQVLESF 240
Score = 20.8 bits (42), Expect(2) = 2e-11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 87 ATLEQGKQAH 116
A LEQG+QAH
Sbjct: 165 AILEQGRQAH 174
>ref|XP_010647234.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like isoform X1 [Vitis vinifera]
Length = 540
Score = 74.7 bits (182), Expect = 2e-11
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +1
Query: 73 KASSRQH*SKGSKPMDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALE 252
K+ +++ S MDMY KCS+ DGH VF+KSL++NVITWT LISGYGQ+GRV E L
Sbjct: 280 KSQIKENVVVNSALMDMYFKCSSLYDGHRVFNKSLNRNVITWTALISGYGQHGRVAEVLV 339
Query: 253 LF 258
F
Sbjct: 340 FF 341
>emb|CBI38481.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 74.7 bits (182), Expect = 2e-11
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +1
Query: 73 KASSRQH*SKGSKPMDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALE 252
K+ +++ S MDMY KCS+ DGH VF+KSL++NVITWT LISGYGQ+GRV E L
Sbjct: 220 KSQIKENVVVNSALMDMYFKCSSLYDGHRVFNKSLNRNVITWTALISGYGQHGRVAEVLV 279
Query: 253 LF 258
F
Sbjct: 280 FF 281
>emb|CDP17864.1| unnamed protein product [Coffea canephora]
Length = 705
Score = 73.6 bits (179), Expect(2) = 4e-11
Identities = 29/48 (60%), Positives = 41/48 (85%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
+DMY KCS+ +GH+VF+K LD+N++TW+ LISGYGQ+GRV+E +E F
Sbjct: 290 VDMYFKCSSLSEGHIVFEKFLDRNIVTWSALISGYGQHGRVVEVIESF 337
Score = 20.8 bits (42), Expect(2) = 4e-11
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 87 ATLEQGKQAH 116
A LEQG+QAH
Sbjct: 262 AILEQGRQAH 271
>ref|XP_007026296.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508781662|gb|EOY28918.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 545
Score = 71.2 bits (173), Expect(2) = 4e-11
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS+ GH VFD+ + +NV+TWT+LISGYGQ+GRVIE LE F
Sbjct: 299 MDMYFKCSSLTHGHQVFDEVVYRNVVTWTSLISGYGQHGRVIEVLESF 346
Score = 23.1 bits (48), Expect(2) = 4e-11
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3
Query: 87 ATLEQGKQAHG 119
ATLE GK+AHG
Sbjct: 271 ATLEHGKRAHG 281
>ref|XP_008440079.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16470
[Cucumis melo]
Length = 478
Score = 72.4 bits (176), Expect(2) = 5e-11
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
+DMY KCS+ DGH F+KS+++NVITWT LISGYGQ+GRV E LE F
Sbjct: 231 VDMYFKCSSLSDGHKAFNKSINRNVITWTALISGYGQHGRVSEVLESF 278
Score = 21.6 bits (44), Expect(2) = 5e-11
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 87 ATLEQGKQAHG 119
A+LE GK+AHG
Sbjct: 203 ASLEHGKRAHG 213
>ref|XP_002520501.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540343|gb|EEF41914.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 383
Score = 73.6 bits (179), Expect = 5e-11
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +1
Query: 73 KASSRQH*SKGSKPMDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALE 252
K + R++ S +DMY KCS+ DGH F+KS+++N++TWT+LISGYGQ+GRV E LE
Sbjct: 137 KCNLRENVVVNSALIDMYFKCSSLTDGHKAFNKSVNRNIVTWTSLISGYGQHGRVTEVLE 196
Query: 253 LF 258
F
Sbjct: 197 SF 198
>ref|XP_012849237.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like isoform X2 [Erythranthe guttatus]
Length = 555
Score = 69.3 bits (168), Expect(2) = 6e-11
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS+P D VFD SL +NVITWT LISGYG +GRV E L+ F
Sbjct: 299 MDMYFKCSSPHDAFRVFDTSLQRNVITWTCLISGYGLHGRVYEVLDAF 346
Score = 24.3 bits (51), Expect(2) = 6e-11
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 87 ATLEQGKQAHG 119
A LEQGKQAHG
Sbjct: 271 AILEQGKQAHG 281
>gb|EYU27680.1| hypothetical protein MIMGU_mgv1a022067mg, partial [Erythranthe
guttata]
Length = 473
Score = 69.3 bits (168), Expect(2) = 6e-11
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +1
Query: 115 MDMYLKCSNPCDGHLVFDKSLDKNVITWTTLISGYGQNGRVIEALELF 258
MDMY KCS+P D VFD SL +NVITWT LISGYG +GRV E L+ F
Sbjct: 167 MDMYFKCSSPHDAFRVFDTSLQRNVITWTCLISGYGLHGRVYEVLDAF 214
Score = 24.3 bits (51), Expect(2) = 6e-11
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3
Query: 87 ATLEQGKQAHG 119
A LEQGKQAHG
Sbjct: 139 AILEQGKQAHG 149