BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00028194
         (601 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   324   3e-86
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   323   6e-86
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   323   6e-86
ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III s...   319   8e-85
ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III s...   318   2e-84
ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III s...   318   2e-84
ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III s...   315   1e-83
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              313   4e-83
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   313   4e-83
ref|XP_010535561.1| PREDICTED: DNA-directed RNA polymerase III s...   300   5e-79
gb|KGN64727.1| hypothetical protein Csa_1G084260 [Cucumis sativus]    297   3e-78
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   297   3e-78
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   297   3e-78
ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   295   1e-77
gb|KHN22017.1| DNA-directed RNA polymerase III subunit RPC1 [Gly...   291   2e-76
ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III s...   291   2e-76
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   291   2e-76
ref|XP_014493454.1| PREDICTED: DNA-directed RNA polymerase III s...   288   1e-75
ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III s...   288   2e-75
ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III s...   288   2e-75

>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Solanum
           lycopersicum]
          Length = 1390

 Score =  324 bits (830), Expect = 3e-86
 Identities = 162/194 (83%), Positives = 175/194 (90%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQANASLHQE+S++ S  K+ N W+DLQMEVAQYINSDVRGVPL MQP +PLSGF 
Sbjct: 280 LKRIIQANASLHQEMSDS-SPVKSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFT 338

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMA++LTYP+RVS+HN E
Sbjct: 339 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIE 398

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGPNKYPGA+FIR  DG  +SLMF   KR ADELKFG IV+RHLEDGDIVLFN
Sbjct: 399 KLRQCVRNGPNKYPGAKFIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFN 458

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIM HR
Sbjct: 459 RQPSLHRMSIMSHR 472


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X2 [Solanum tuberosum]
          Length = 1243

 Score =  323 bits (827), Expect = 6e-86
 Identities = 162/194 (83%), Positives = 176/194 (90%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQANASLHQE+S++ S  K+ N W+DLQMEVAQYINSDVRGVPL+MQ  +PLSGF 
Sbjct: 280 LKRIIQANASLHQEMSDS-SPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFT 338

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMA++LTYP+RVS+HN E
Sbjct: 339 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIE 398

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGPNKYPGA+FIR  DG+ ISLMF   KR ADELKFG IV+RHLEDGDIVLFN
Sbjct: 399 KLRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFN 458

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIM HR
Sbjct: 459 RQPSLHRMSIMSHR 472


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           isoform X1 [Solanum tuberosum]
          Length = 1394

 Score =  323 bits (827), Expect = 6e-86
 Identities = 162/194 (83%), Positives = 176/194 (90%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQANASLHQE+S++ S  K+ N W+DLQMEVAQYINSDVRGVPL+MQ  +PLSGF 
Sbjct: 280 LKRIIQANASLHQEMSDS-SPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFT 338

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMA++LTYP+RVS+HN E
Sbjct: 339 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIE 398

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGPNKYPGA+FIR  DG+ ISLMF   KR ADELKFG IV+RHLEDGDIVLFN
Sbjct: 399 KLRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFN 458

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIM HR
Sbjct: 459 RQPSLHRMSIMSHR 472


>ref|XP_011081084.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Sesamum
           indicum]
          Length = 1405

 Score =  319 bits (817), Expect = 8e-85
 Identities = 161/194 (82%), Positives = 172/194 (88%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQANASL QEL ET    KN  +W DLQMEVAQYINSDVRG+P +M  AKPLSGFV
Sbjct: 283 LKRIIQANASLRQELLETNLYNKNLTSWDDLQMEVAQYINSDVRGLPFHMTTAKPLSGFV 342

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKI+EVAIPILMA++LTYP+RVS HN E
Sbjct: 343 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPILMARILTYPERVSHHNIE 402

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGPNKYPGA+FIR+ DGT ISLMF   KR ADELK+G IV+RHLEDGDIVLFN
Sbjct: 403 KLRQCVRNGPNKYPGAKFIRQPDGTEISLMFSSRKRHADELKYGYIVDRHLEDGDIVLFN 462

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIM HR
Sbjct: 463 RQPSLHRMSIMSHR 476


>ref|XP_009610319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
           [Nicotiana tomentosiformis]
           gi|697112874|ref|XP_009610320.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc1 isoform X2 [Nicotiana
           tomentosiformis]
          Length = 1375

 Score =  318 bits (814), Expect = 2e-84
 Identities = 157/194 (80%), Positives = 175/194 (90%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQANA L +++S+T    K+ +AW+DLQMEVAQYINSDVRGVPL++Q +KP+SGF 
Sbjct: 280 LKRIIQANARLLEDISDTSFQNKSLSAWVDLQMEVAQYINSDVRGVPLHLQASKPMSGFT 339

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMA++LTYP+RVS+HN E
Sbjct: 340 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIE 399

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGPNKYPGA+FI+  DGT ISLMF   KR ADELKFG IV+RHLEDGDIVLFN
Sbjct: 400 KLRQCVRNGPNKYPGAKFIKHPDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFN 459

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIM HR
Sbjct: 460 RQPSLHRMSIMSHR 473


>ref|XP_009610317.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
           [Nicotiana tomentosiformis]
           gi|697112870|ref|XP_009610318.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc1 isoform X1 [Nicotiana
           tomentosiformis]
          Length = 1390

 Score =  318 bits (814), Expect = 2e-84
 Identities = 157/194 (80%), Positives = 175/194 (90%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQANA L +++S+T    K+ +AW+DLQMEVAQYINSDVRGVPL++Q +KP+SGF 
Sbjct: 280 LKRIIQANARLLEDISDTSFQNKSLSAWVDLQMEVAQYINSDVRGVPLHLQASKPMSGFT 339

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMA++LTYP+RVS+HN E
Sbjct: 340 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIE 399

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGPNKYPGA+FI+  DGT ISLMF   KR ADELKFG IV+RHLEDGDIVLFN
Sbjct: 400 KLRQCVRNGPNKYPGAKFIKHPDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFN 459

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIM HR
Sbjct: 460 RQPSLHRMSIMSHR 473


>ref|XP_009800353.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
           sylvestris] gi|698510366|ref|XP_009800354.1| PREDICTED:
           DNA-directed RNA polymerase III subunit rpc1 [Nicotiana
           sylvestris]
          Length = 1390

 Score =  315 bits (807), Expect = 1e-83
 Identities = 156/194 (80%), Positives = 173/194 (89%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQ NA L +++S+T    K+ NAW+ LQMEVAQYINSDVRGVPL++Q +KP+SGF 
Sbjct: 280 LKRIIQENARLLEDISDTSFQNKSLNAWVGLQMEVAQYINSDVRGVPLHLQASKPMSGFT 339

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMA++LTYP+RVS+HN E
Sbjct: 340 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTYPERVSQHNIE 399

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGPNKYPGA+FI+  DGT ISLMF   KR ADELKFG IV+RHLEDGDIVLFN
Sbjct: 400 KLRQCVRNGPNKYPGAKFIKHPDGTEISLMFSSRKRHADELKFGYIVDRHLEDGDIVLFN 459

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIM HR
Sbjct: 460 RQPSLHRMSIMSHR 473


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  313 bits (802), Expect = 4e-83
 Identities = 158/194 (81%), Positives = 171/194 (88%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQANASLHQEL +T ST+K    W  LQ+EVAQYINSDVRGVPL MQ A+PLSGFV
Sbjct: 282 LKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFV 341

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAK+L+YP+RVS HN E
Sbjct: 342 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIE 401

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQC+ NGP KYPGA+ IR  DG++ SLMF   KR ADELK+G IVERHLEDGD+VLFN
Sbjct: 402 KLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFN 461

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIMCHR
Sbjct: 462 RQPSLHRMSIMCHR 475


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Vitis
           vinifera]
          Length = 1383

 Score =  313 bits (802), Expect = 4e-83
 Identities = 158/194 (81%), Positives = 171/194 (88%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQANASLHQEL +T ST+K    W  LQ+EVAQYINSDVRGVPL MQ A+PLSGFV
Sbjct: 282 LKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFV 341

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAK+L+YP+RVS HN E
Sbjct: 342 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIE 401

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQC+ NGP KYPGA+ IR  DG++ SLMF   KR ADELK+G IVERHLEDGD+VLFN
Sbjct: 402 KLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFN 461

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIMCHR
Sbjct: 462 RQPSLHRMSIMCHR 475


>ref|XP_010535561.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Tarenaya
           hassleriana]
          Length = 1376

 Score =  300 bits (767), Expect = 5e-79
 Identities = 150/194 (77%), Positives = 168/194 (86%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKR+IQ NASL Q L E  ++ KN +AW  LQ+EVAQYINSDVRGVPL MQP+KPLSGF+
Sbjct: 285 LKRVIQNNASLRQFLVEPTTSPKNLHAWESLQVEVAQYINSDVRGVPLAMQPSKPLSGFI 344

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMA++LT+P+ VSRHN E
Sbjct: 345 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMARILTFPECVSRHNIE 404

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGP KYPGAR +R  DG+  +L+    KR+ADEL  G IV+RHLEDGD+VLFN
Sbjct: 405 KLRQCVRNGPYKYPGARLVRYPDGSSRALVGDYRKRLADELTIGCIVDRHLEDGDVVLFN 464

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIMCHR
Sbjct: 465 RQPSLHRMSIMCHR 478


>gb|KGN64727.1| hypothetical protein Csa_1G084260 [Cucumis sativus]
          Length = 1084

 Score =  297 bits (761), Expect = 3e-78
 Identities = 147/195 (75%), Positives = 167/195 (85%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQ NAS+ QELS + S  K   +W  LQ EVAQ INSDVRG+P  MQ +KPL+GFV
Sbjct: 104 LKRIIQQNASVSQELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFV 163

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNL GKRVE+TGRTVISPDPNLKITEVA+PI MA++LTYP+RV+RHN E
Sbjct: 164 QRLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIE 223

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCV NGP+KYPGAR +R  DG++ SLM    KR+ADELK+G+IVERHLEDGD+VLFN
Sbjct: 224 KLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFN 283

Query: 542 RQPSLHRMSIMCHRV 586
           RQPSLHRMSIMCHRV
Sbjct: 284 RQPSLHRMSIMCHRV 298


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
           gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
           [Theobroma cacao]
          Length = 1395

 Score =  297 bits (761), Expect = 3e-78
 Identities = 151/194 (77%), Positives = 165/194 (85%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQANASL QEL ET +  K    W  LQ+EVAQYINSDVRGVP  MQ +KPLSGFV
Sbjct: 279 LKRIIQANASLRQELVETNAAFKCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFV 338

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QR+KGK GRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPI MA++LTYP+RVS HN E
Sbjct: 339 QRIKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIE 398

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGP+KYPGAR +R  DG+   L+    KR+ADELKFG +V+RHLEDGDIVLFN
Sbjct: 399 KLRQCVRNGPSKYPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFN 458

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIMCHR
Sbjct: 459 RQPSLHRMSIMCHR 472


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Cucumis
           sativus]
          Length = 1400

 Score =  297 bits (761), Expect = 3e-78
 Identities = 147/195 (75%), Positives = 167/195 (85%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQ NAS+ QELS + S  K   +W  LQ EVAQ INSDVRG+P  MQ +KPL+GFV
Sbjct: 278 LKRIIQQNASVSQELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFV 337

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNL GKRVE+TGRTVISPDPNLKITEVA+PI MA++LTYP+RV+RHN E
Sbjct: 338 QRLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIE 397

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCV NGP+KYPGAR +R  DG++ SLM    KR+ADELK+G+IVERHLEDGD+VLFN
Sbjct: 398 KLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFN 457

Query: 542 RQPSLHRMSIMCHRV 586
           RQPSLHRMSIMCHRV
Sbjct: 458 RQPSLHRMSIMCHRV 472


>ref|XP_008465290.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
           subunit rpc1 [Cucumis melo]
          Length = 1400

 Score =  295 bits (755), Expect = 1e-77
 Identities = 146/195 (74%), Positives = 166/195 (85%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQ NAS+ QELS + S  K   +W  LQ EVAQ INSDVRG+P  MQ +KPL+GFV
Sbjct: 278 LKRIIQQNASVSQELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPFTMQVSKPLAGFV 337

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNL GKRVE+TGRTVISPDPNLKITEVA+PI MA++LTYP+RV+ HN E
Sbjct: 338 QRLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTSHNIE 397

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCV NGP+KYPGAR +R  DG++ SLM    KR+ADELK+G+IVERHLEDGD+VLFN
Sbjct: 398 KLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFN 457

Query: 542 RQPSLHRMSIMCHRV 586
           RQPSLHRMSIMCHRV
Sbjct: 458 RQPSLHRMSIMCHRV 472


>gb|KHN22017.1| DNA-directed RNA polymerase III subunit RPC1 [Glycine soja]
          Length = 1130

 Score =  291 bits (744), Expect = 2e-76
 Identities = 145/194 (74%), Positives = 162/194 (83%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LK IIQANA L QEL E+  ++K  + W  LQ EVAQ+INSDVRG+P YMQP K L+GFV
Sbjct: 20  LKNIIQANAVLRQELQESTFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFV 79

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGK GRFRGNLSGKRVEYTGRTVISPDPNLKI+EVAIPI MA++LTYP+RV+ HN E
Sbjct: 80  QRLKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIE 139

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGP+KYPGAR +R+  G   SL     KR ADEL+ GDIV+RHLEDGDIVLFN
Sbjct: 140 KLRQCVRNGPDKYPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFN 199

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIMCHR
Sbjct: 200 RQPSLHRMSIMCHR 213


>ref|XP_010265589.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 [Nelumbo
           nucifera]
          Length = 1392

 Score =  291 bits (744), Expect = 2e-76
 Identities = 147/194 (75%), Positives = 161/194 (82%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           L  II+ANA L Q+L      +K    W  LQ+EVAQYINSDVRG+P  MQP+KPL GFV
Sbjct: 291 LSAIIRANAPLRQDLQGANPKSKCLLDWDQLQIEVAQYINSDVRGIPTSMQPSKPLRGFV 350

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMA++LTYP+RVS HN E
Sbjct: 351 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSHHNIE 410

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNG  KYPGA FIR  DG++++L F   KR ADELK+G IVERHLEDGDIVLFN
Sbjct: 411 KLRQCVRNGSQKYPGANFIRYPDGSIMNLRFSARKRAADELKYGYIVERHLEDGDIVLFN 470

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIM HR
Sbjct: 471 RQPSLHRMSIMSHR 484


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
           [Glycine max] gi|947038807|gb|KRG88695.1| hypothetical
           protein GLYMA_U034000 [Glycine max]
          Length = 1391

 Score =  291 bits (744), Expect = 2e-76
 Identities = 145/194 (74%), Positives = 162/194 (83%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LK IIQANA L QEL E+  ++K  + W  LQ EVAQ+INSDVRG+P YMQP K L+GFV
Sbjct: 281 LKNIIQANAVLRQELQESTFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFV 340

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGK GRFRGNLSGKRVEYTGRTVISPDPNLKI+EVAIPI MA++LTYP+RV+ HN E
Sbjct: 341 QRLKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIE 400

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGP+KYPGAR +R+  G   SL     KR ADEL+ GDIV+RHLEDGDIVLFN
Sbjct: 401 KLRQCVRNGPDKYPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFN 460

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIMCHR
Sbjct: 461 RQPSLHRMSIMCHR 474


>ref|XP_014493454.1| PREDICTED: DNA-directed RNA polymerase III subunit 1 [Vigna radiata
           var. radiata]
          Length = 1392

 Score =  288 bits (738), Expect = 1e-75
 Identities = 144/194 (74%), Positives = 162/194 (83%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LK IIQANA L QEL E+  ++K  + W  LQ+EVAQ+INS+VRG+P YMQ  K L+GFV
Sbjct: 281 LKNIIQANAVLRQELQESSVSSKLLDGWDILQIEVAQFINSEVRGIPFYMQSTKQLAGFV 340

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGK GRFRGNLSGKRVEYTGRTVISPDPNLKI+EVAIPILMA +LTYP+RV+ HN E
Sbjct: 341 QRLKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPILMAHILTYPERVTHHNIE 400

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGP+KYPGAR +R+  G   SL     KR ADEL+ GDIV+RHLEDGDIVLFN
Sbjct: 401 KLRQCVRNGPDKYPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFN 460

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIMCHR
Sbjct: 461 RQPSLHRMSIMCHR 474


>ref|XP_012471451.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
           [Gossypium raimondii]
          Length = 1395

 Score =  288 bits (736), Expect = 2e-75
 Identities = 146/194 (75%), Positives = 166/194 (85%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQAN+SL Q+L ++ +     N W  LQ++VAQYINSDVRGVP  MQPA+PLSGF+
Sbjct: 280 LKRIIQANSSLRQQLVDSNAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQPARPLSGFL 339

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPI MA++L+YP+RVS HN E
Sbjct: 340 QRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSSHNIE 399

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGP+KYPGA  +R  DG+   L+    KR+ADELKFG IV+RHLEDGDIVLFN
Sbjct: 400 KLRQCVRNGPSKYPGAVKVRYPDGSARLLIGDYRKRLADELKFGCIVDRHLEDGDIVLFN 459

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIMCHR
Sbjct: 460 RQPSLHRMSIMCHR 473


>ref|XP_012471450.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
           [Gossypium raimondii] gi|763752836|gb|KJB20224.1|
           hypothetical protein B456_003G139100 [Gossypium
           raimondii]
          Length = 1398

 Score =  288 bits (736), Expect = 2e-75
 Identities = 146/194 (75%), Positives = 166/194 (85%)
 Frame = +2

Query: 2   LKRIIQANASLHQELSETISTTKNKNAWLDLQMEVAQYINSDVRGVPLYMQPAKPLSGFV 181
           LKRIIQAN+SL Q+L ++ +     N W  LQ++VAQYINSDVRGVP  MQPA+PLSGF+
Sbjct: 283 LKRIIQANSSLRQQLVDSNAAFHCLNGWDLLQVDVAQYINSDVRGVPTEMQPARPLSGFL 342

Query: 182 QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKVLTYPDRVSRHNFE 361
           QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPI MA++L+YP+RVS HN E
Sbjct: 343 QRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSSHNIE 402

Query: 362 KLRQCVRNGPNKYPGARFIRKCDGTLISLMFCPLKRVADELKFGDIVERHLEDGDIVLFN 541
           KLRQCVRNGP+KYPGA  +R  DG+   L+    KR+ADELKFG IV+RHLEDGDIVLFN
Sbjct: 403 KLRQCVRNGPSKYPGAVKVRYPDGSARLLIGDYRKRLADELKFGCIVDRHLEDGDIVLFN 462

Query: 542 RQPSLHRMSIMCHR 583
           RQPSLHRMSIMCHR
Sbjct: 463 RQPSLHRMSIMCHR 476