BLASTX nr result

ID: Cornus23_contig00026956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00026956
         (726 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010656902.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vi...   412   e-113
emb|CBI17913.3| unnamed protein product [Vitis vinifera]              412   e-113
ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vi...   412   e-113
ref|XP_002325262.2| DNA ligase IV family protein [Populus tricho...   410   e-112
ref|XP_011017673.1| PREDICTED: DNA ligase 4 isoform X4 [Populus ...   409   e-111
ref|XP_011017672.1| PREDICTED: DNA ligase 4 isoform X3 [Populus ...   409   e-111
ref|XP_011017671.1| PREDICTED: DNA ligase 4 isoform X2 [Populus ...   409   e-111
ref|XP_011017670.1| PREDICTED: DNA ligase 4 isoform X1 [Populus ...   409   e-111
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                         407   e-111
ref|XP_012068473.1| PREDICTED: DNA ligase 4 [Jatropha curcas]         405   e-110
ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis] g...   401   e-109
ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prun...   400   e-109
ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneid...   400   e-109
ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume]             400   e-109
gb|KDO61946.1| hypothetical protein CISIN_1g0010821mg, partial [...   399   e-108
gb|KDO61940.1| hypothetical protein CISIN_1g0010821mg, partial [...   399   e-108
ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Cit...   399   e-108
ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citr...   399   e-108
ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citr...   399   e-108
ref|XP_008388689.1| PREDICTED: DNA ligase 4 [Malus domestica]         391   e-106

>ref|XP_010656902.1| PREDICTED: DNA ligase 4 isoform X2 [Vitis vinifera]
          Length = 1044

 Score =  412 bits (1060), Expect = e-113
 Identities = 193/242 (79%), Positives = 226/242 (93%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PD+WIDSPEKSIILSITSDIRTIRSEVF+APYSLRFPRID VRYDKPWHECLDVQSF+EL
Sbjct: 421  PDIWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDCVRYDKPWHECLDVQSFMEL 480

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQRGADYG  Q++  +R +SSKKG++K   VVPSH +QTD++++KGE+LIFSN
Sbjct: 481  VHSSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVPSHFMQTDVTNVKGETLIFSN 540

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVN PPTHSLDSLHK+V ENGG FSMN+N+SVTHCVAA+SKGIK++AAKL GDII+
Sbjct: 541  MMFYFVNTPPTHSLDSLHKLVVENGGTFSMNLNNSVTHCVAAQSKGIKYQAAKLRGDIIH 600

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
            CSW+FDCCSQ+KLLPLQPKYFLFLS+ SKKKL+EEID+FSDSYY DL+I++I+QLLSN++
Sbjct: 601  CSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYYQDLDISDIKQLLSNVD 660

Query: 6    RS 1
            RS
Sbjct: 661  RS 662


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  412 bits (1060), Expect = e-113
 Identities = 193/242 (79%), Positives = 226/242 (93%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PD+WIDSPEKSIILSITSDIRTIRSEVF+APYSLRFPRID VRYDKPWHECLDVQSF+EL
Sbjct: 540  PDIWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDCVRYDKPWHECLDVQSFMEL 599

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQRGADYG  Q++  +R +SSKKG++K   VVPSH +QTD++++KGE+LIFSN
Sbjct: 600  VHSSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVPSHFMQTDVTNVKGETLIFSN 659

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVN PPTHSLDSLHK+V ENGG FSMN+N+SVTHCVAA+SKGIK++AAKL GDII+
Sbjct: 660  MMFYFVNTPPTHSLDSLHKLVVENGGTFSMNLNNSVTHCVAAQSKGIKYQAAKLRGDIIH 719

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
            CSW+FDCCSQ+KLLPLQPKYFLFLS+ SKKKL+EEID+FSDSYY DL+I++I+QLLSN++
Sbjct: 720  CSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYYQDLDISDIKQLLSNVD 779

Query: 6    RS 1
            RS
Sbjct: 780  RS 781


>ref|XP_002263967.1| PREDICTED: DNA ligase 4 isoform X1 [Vitis vinifera]
          Length = 1162

 Score =  412 bits (1060), Expect = e-113
 Identities = 193/242 (79%), Positives = 226/242 (93%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PD+WIDSPEKSIILSITSDIRTIRSEVF+APYSLRFPRID VRYDKPWHECLDVQSF+EL
Sbjct: 539  PDIWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDCVRYDKPWHECLDVQSFMEL 598

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQRGADYG  Q++  +R +SSKKG++K   VVPSH +QTD++++KGE+LIFSN
Sbjct: 599  VHSSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVPSHFMQTDVTNVKGETLIFSN 658

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVN PPTHSLDSLHK+V ENGG FSMN+N+SVTHCVAA+SKGIK++AAKL GDII+
Sbjct: 659  MMFYFVNTPPTHSLDSLHKLVVENGGTFSMNLNNSVTHCVAAQSKGIKYQAAKLRGDIIH 718

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
            CSW+FDCCSQ+KLLPLQPKYFLFLS+ SKKKL+EEID+FSDSYY DL+I++I+QLLSN++
Sbjct: 719  CSWVFDCCSQKKLLPLQPKYFLFLSEHSKKKLQEEIDKFSDSYYQDLDISDIKQLLSNVD 778

Query: 6    RS 1
            RS
Sbjct: 779  RS 780


>ref|XP_002325262.2| DNA ligase IV family protein [Populus trichocarpa]
            gi|550318700|gb|EEF03827.2| DNA ligase IV family protein
            [Populus trichocarpa]
          Length = 1242

 Score =  410 bits (1054), Expect = e-112
 Identities = 196/242 (80%), Positives = 224/242 (92%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVWI++P+KSIILSITSDIRTI SEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL
Sbjct: 548  PDVWIENPDKSIILSITSDIRTISSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 607

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQ+G  YG  Q++     +SS+KG+KK+VSVVPSHLIQTDISDIKGE+LIFSN
Sbjct: 608  VHSSNGTTQKGKGYGYVQDSKPTHIKSSRKGEKKSVSVVPSHLIQTDISDIKGETLIFSN 667

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVNVPP++SL+SLHKMVAENGG FSMN+N+SVTHC+AAESKGIK++AAKL+GDII+
Sbjct: 668  MMFYFVNVPPSNSLESLHKMVAENGGTFSMNLNNSVTHCIAAESKGIKYQAAKLHGDIIH 727

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCC Q+KLLPLQPK FLFLSD SKKKL EEIDEFSDSYYWDL++++I+QLLSNIN
Sbjct: 728  YSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFSDSYYWDLDLSDIKQLLSNIN 787

Query: 6    RS 1
             S
Sbjct: 788  AS 789


>ref|XP_011017673.1| PREDICTED: DNA ligase 4 isoform X4 [Populus euphratica]
          Length = 1081

 Score =  409 bits (1051), Expect = e-111
 Identities = 195/242 (80%), Positives = 225/242 (92%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVWI++P+KSIILSITSDIRTI SEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL
Sbjct: 310  PDVWIENPDKSIILSITSDIRTISSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 369

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQ+G  YG  Q++  R  +SS+KG+KK++SVVPSHLIQTDISDIKGE+LIFSN
Sbjct: 370  VHSSNGTTQKGKGYGDVQDSKLRHIKSSRKGEKKSLSVVPSHLIQTDISDIKGETLIFSN 429

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVNVPP++SL+SLHKMVAENGG FSMN+N+SVTHC+AAESKGIK++AAKL+GDII+
Sbjct: 430  MMFYFVNVPPSNSLESLHKMVAENGGTFSMNLNNSVTHCIAAESKGIKYQAAKLHGDIIH 489

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCC Q+KLLPLQPK FLFLSD SKKKL EEIDEFSDSYYWDL++++++QLLSNIN
Sbjct: 490  YSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFSDSYYWDLDLSDMKQLLSNIN 549

Query: 6    RS 1
             S
Sbjct: 550  AS 551


>ref|XP_011017672.1| PREDICTED: DNA ligase 4 isoform X3 [Populus euphratica]
          Length = 1085

 Score =  409 bits (1051), Expect = e-111
 Identities = 195/242 (80%), Positives = 225/242 (92%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVWI++P+KSIILSITSDIRTI SEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL
Sbjct: 314  PDVWIENPDKSIILSITSDIRTISSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 373

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQ+G  YG  Q++  R  +SS+KG+KK++SVVPSHLIQTDISDIKGE+LIFSN
Sbjct: 374  VHSSNGTTQKGKGYGDVQDSKLRHIKSSRKGEKKSLSVVPSHLIQTDISDIKGETLIFSN 433

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVNVPP++SL+SLHKMVAENGG FSMN+N+SVTHC+AAESKGIK++AAKL+GDII+
Sbjct: 434  MMFYFVNVPPSNSLESLHKMVAENGGTFSMNLNNSVTHCIAAESKGIKYQAAKLHGDIIH 493

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCC Q+KLLPLQPK FLFLSD SKKKL EEIDEFSDSYYWDL++++++QLLSNIN
Sbjct: 494  YSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFSDSYYWDLDLSDMKQLLSNIN 553

Query: 6    RS 1
             S
Sbjct: 554  AS 555


>ref|XP_011017671.1| PREDICTED: DNA ligase 4 isoform X2 [Populus euphratica]
          Length = 1197

 Score =  409 bits (1051), Expect = e-111
 Identities = 195/242 (80%), Positives = 225/242 (92%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVWI++P+KSIILSITSDIRTI SEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL
Sbjct: 548  PDVWIENPDKSIILSITSDIRTISSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 607

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQ+G  YG  Q++  R  +SS+KG+KK++SVVPSHLIQTDISDIKGE+LIFSN
Sbjct: 608  VHSSNGTTQKGKGYGDVQDSKLRHIKSSRKGEKKSLSVVPSHLIQTDISDIKGETLIFSN 667

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVNVPP++SL+SLHKMVAENGG FSMN+N+SVTHC+AAESKGIK++AAKL+GDII+
Sbjct: 668  MMFYFVNVPPSNSLESLHKMVAENGGTFSMNLNNSVTHCIAAESKGIKYQAAKLHGDIIH 727

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCC Q+KLLPLQPK FLFLSD SKKKL EEIDEFSDSYYWDL++++++QLLSNIN
Sbjct: 728  YSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFSDSYYWDLDLSDMKQLLSNIN 787

Query: 6    RS 1
             S
Sbjct: 788  AS 789


>ref|XP_011017670.1| PREDICTED: DNA ligase 4 isoform X1 [Populus euphratica]
          Length = 1319

 Score =  409 bits (1051), Expect = e-111
 Identities = 195/242 (80%), Positives = 225/242 (92%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVWI++P+KSIILSITSDIRTI SEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL
Sbjct: 548  PDVWIENPDKSIILSITSDIRTISSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 607

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQ+G  YG  Q++  R  +SS+KG+KK++SVVPSHLIQTDISDIKGE+LIFSN
Sbjct: 608  VHSSNGTTQKGKGYGDVQDSKLRHIKSSRKGEKKSLSVVPSHLIQTDISDIKGETLIFSN 667

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVNVPP++SL+SLHKMVAENGG FSMN+N+SVTHC+AAESKGIK++AAKL+GDII+
Sbjct: 668  MMFYFVNVPPSNSLESLHKMVAENGGTFSMNLNNSVTHCIAAESKGIKYQAAKLHGDIIH 727

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCC Q+KLLPLQPK FLFLSD SKKKL EEIDEFSDSYYWDL++++++QLLSNIN
Sbjct: 728  YSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFSDSYYWDLDLSDMKQLLSNIN 787

Query: 6    RS 1
             S
Sbjct: 788  AS 789


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score =  407 bits (1045), Expect = e-111
 Identities = 195/242 (80%), Positives = 223/242 (92%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVWI++P+KSIILSITSDIRTI SEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL
Sbjct: 548  PDVWIENPDKSIILSITSDIRTISSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 607

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQ+G  YG  Q++     +SS+KG+KK+VSVVPSHLIQTDISDIKGE+LIFSN
Sbjct: 608  VHSSNGTTQKGKGYGDVQDSKPTHIKSSRKGEKKSVSVVPSHLIQTDISDIKGETLIFSN 667

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFY VNVPP++SL+SLHKMVAENGG FSMN+N+SVTHC+AAESKGIK++AAKL+GDII+
Sbjct: 668  MMFYVVNVPPSNSLESLHKMVAENGGTFSMNLNNSVTHCIAAESKGIKYQAAKLHGDIIH 727

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCC Q+KLLPLQPK FLFLSD SKKKL EEIDEFSDSYYWDL++++I+QLLSNIN
Sbjct: 728  YSWVLDCCLQKKLLPLQPKSFLFLSDGSKKKLHEEIDEFSDSYYWDLDLSDIKQLLSNIN 787

Query: 6    RS 1
             S
Sbjct: 788  AS 789


>ref|XP_012068473.1| PREDICTED: DNA ligase 4 [Jatropha curcas]
          Length = 1158

 Score =  405 bits (1042), Expect = e-110
 Identities = 189/242 (78%), Positives = 221/242 (91%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVWI+SPEKSIILSITSDIRTI SEVF+APYSLRFPRIDRVRYDKPW+ECLDVQSFVEL
Sbjct: 539  PDVWIESPEKSIILSITSDIRTISSEVFAAPYSLRFPRIDRVRYDKPWYECLDVQSFVEL 598

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQ+G D G  Q+  +   +SSKKG +KN SVVPSH I+TD+SD++ E+LIFS 
Sbjct: 599  VHSSNGTTQKGKDSGGLQDRKQTSVKSSKKGGRKNASVVPSHFIETDVSDVREETLIFSK 658

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVNVPPTHSL+SLHKMV ENGG FSMN+N SVTHC+AAE+KGIK++AAKL+GD+I+
Sbjct: 659  MMFYFVNVPPTHSLESLHKMVIENGGTFSMNLNKSVTHCIAAENKGIKYQAAKLHGDVIH 718

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
            CSW+ DCCSQ+KLLPLQPKYFLFLS++SKKKL+EEIDEFSDSYYWD+++A+I+QLL NIN
Sbjct: 719  CSWVLDCCSQKKLLPLQPKYFLFLSEASKKKLQEEIDEFSDSYYWDIDLADIKQLLENIN 778

Query: 6    RS 1
             S
Sbjct: 779  AS 780


>ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis]
            gi|223532899|gb|EEF34668.1| DNA ligase IV, putative
            [Ricinus communis]
          Length = 850

 Score =  401 bits (1031), Expect = e-109
 Identities = 189/242 (78%), Positives = 216/242 (89%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVWI+SPEKSIILSITSDIRTI SEVF+APYSLRFPRIDRVRYDKPWHECLDVQSFVEL
Sbjct: 515  PDVWIESPEKSIILSITSDIRTISSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 574

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQ G D    Q+N     +SSKKG +KN S VPSH I+TD+S +K ES IFS 
Sbjct: 575  VHSSNGTTQNGKDNKGLQDNKPTSVKSSKKGGRKNASAVPSHFIETDVSGVKEESFIFSK 634

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVNVPPTHSL+SLHKMVAENGG FSMN+N SVTHC+AAESKGIK++A KL+GDII+
Sbjct: 635  MMFYFVNVPPTHSLESLHKMVAENGGSFSMNLNKSVTHCIAAESKGIKYQATKLHGDIIH 694

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
            CSW+ DCCSQ++LLPLQPKYFLFL+DSSKKKL+EEIDEFSDSYYWD+++A+++QLL +IN
Sbjct: 695  CSWVLDCCSQKRLLPLQPKYFLFLADSSKKKLQEEIDEFSDSYYWDVDLADMKQLLDSIN 754

Query: 6    RS 1
             S
Sbjct: 755  TS 756


>ref|XP_007225204.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
           gi|462422140|gb|EMJ26403.1| hypothetical protein
           PRUPE_ppa002057mg [Prunus persica]
          Length = 723

 Score =  400 bits (1029), Expect = e-109
 Identities = 185/242 (76%), Positives = 223/242 (92%)
 Frame = -1

Query: 726 PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
           PDVW++SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDV+SF+EL
Sbjct: 141 PDVWVESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVESFIEL 200

Query: 546 VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
           VHSSNGTTQRG DYG  Q+   +  +SS+K +KKN+SVVPSHL+QTD+S +K ++L+FSN
Sbjct: 201 VHSSNGTTQRGTDYGALQDTKTKHKKSSRKEEKKNLSVVPSHLVQTDVSSVKEDTLLFSN 260

Query: 366 MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
           MMFYFVNVPPT+SLDSLHK+V ENGG FSMN+N++VTHCVAA+SKGIK++AAK +GDII+
Sbjct: 261 MMFYFVNVPPTNSLDSLHKLVVENGGTFSMNLNNAVTHCVAADSKGIKYQAAKRHGDIIH 320

Query: 186 CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
            SW+ DCCSQ++LL LQPKY+LF+S+SSK KL+EEIDEFSDSYYWDL++A+I+QLLSN+ 
Sbjct: 321 FSWVLDCCSQKRLLALQPKYYLFISESSKMKLQEEIDEFSDSYYWDLDLADIKQLLSNMY 380

Query: 6   RS 1
           RS
Sbjct: 381 RS 382


>ref|XP_009359940.1| PREDICTED: DNA ligase 4 [Pyrus x bretschneideri]
          Length = 1163

 Score =  400 bits (1027), Expect = e-109
 Identities = 183/242 (75%), Positives = 222/242 (91%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVW++SPEKSIILSITSDIRTI+SEVF+APYSLRFPRIDRVRYDKPWHECLDVQSF+EL
Sbjct: 540  PDVWVESPEKSIILSITSDIRTIKSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFIEL 599

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            V + NGTTQRG DYG  Q+  KR  +S +K +K+N+S+VPSH +QTD+S +K ++L+FSN
Sbjct: 600  VQAGNGTTQRGTDYGGLQDTKKRSKKSPRKEEKRNLSIVPSHFVQTDVSGVKEDTLLFSN 659

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            +MFYFVNVPPTHSLDSLHK+V ENGG FSMN+N++VTHCVAA+ KGIK++AAK +GDII+
Sbjct: 660  VMFYFVNVPPTHSLDSLHKLVVENGGTFSMNLNNAVTHCVAADGKGIKYQAAKRHGDIIH 719

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCCSQ+KLLPLQPKY+LFLSDSSK+KL+EEID+FSDSYYWDL++AEI+QLLSNI+
Sbjct: 720  ISWVLDCCSQKKLLPLQPKYYLFLSDSSKQKLQEEIDDFSDSYYWDLDLAEIKQLLSNIH 779

Query: 6    RS 1
            RS
Sbjct: 780  RS 781


>ref|XP_008223923.1| PREDICTED: DNA ligase 4 [Prunus mume]
          Length = 1130

 Score =  400 bits (1027), Expect = e-109
 Identities = 185/242 (76%), Positives = 223/242 (92%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVW++SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDV+SF+EL
Sbjct: 506  PDVWVESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVESFMEL 565

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQRG DYG  Q+   +   SS+K +K+N+SVVPSHL+QTD+S +K ++L+FSN
Sbjct: 566  VHSSNGTTQRGTDYGALQDTKTKHKTSSRKEEKRNLSVVPSHLVQTDVSSVKEDTLLFSN 625

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVNVPPT+SLDSLHK+V ENGG FSMN+N++VTHCVAA+SKGIK++AAK +GDII+
Sbjct: 626  MMFYFVNVPPTNSLDSLHKVVVENGGTFSMNLNNAVTHCVAADSKGIKYQAAKRHGDIIH 685

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCCSQ++LL LQPKY+LF+S+SSKKKL+EEIDEFSDSYYWDL++A+I+QLLSN+ 
Sbjct: 686  FSWVLDCCSQKRLLALQPKYYLFISESSKKKLQEEIDEFSDSYYWDLDLADIKQLLSNMY 745

Query: 6    RS 1
            RS
Sbjct: 746  RS 747


>gb|KDO61946.1| hypothetical protein CISIN_1g0010821mg, partial [Citrus sinensis]
          Length = 463

 Score =  399 bits (1024), Expect = e-108
 Identities = 185/242 (76%), Positives = 223/242 (92%)
 Frame = -1

Query: 726 PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
           PDVWI+SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH+CLDVQSFVEL
Sbjct: 124 PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 183

Query: 546 VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
           VHSSNGTTQ+G +YG  Q++  ++  SS+KG+KKNVS+VPSH +QTD+SDIKGE+ IFS+
Sbjct: 184 VHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSD 243

Query: 366 MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
           M+FYFVNVPP +SLDSLHKMV ENGG FSMN+N+SVTHCVAA++KG+K++AAK  GD+I+
Sbjct: 244 MVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIH 303

Query: 186 CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
            SW+ DCCSQ+KLL LQPKY+L LSDSSKKKL+EE+DEFSD Y+WDL++A+I+QLLSN++
Sbjct: 304 YSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVD 363

Query: 6   RS 1
           RS
Sbjct: 364 RS 365


>gb|KDO61940.1| hypothetical protein CISIN_1g0010821mg, partial [Citrus sinensis]
           gi|641843039|gb|KDO61941.1| hypothetical protein
           CISIN_1g0010821mg, partial [Citrus sinensis]
           gi|641843040|gb|KDO61942.1| hypothetical protein
           CISIN_1g0010821mg, partial [Citrus sinensis]
           gi|641843041|gb|KDO61943.1| hypothetical protein
           CISIN_1g0010821mg, partial [Citrus sinensis]
           gi|641843042|gb|KDO61944.1| hypothetical protein
           CISIN_1g0010821mg, partial [Citrus sinensis]
          Length = 743

 Score =  399 bits (1024), Expect = e-108
 Identities = 185/242 (76%), Positives = 223/242 (92%)
 Frame = -1

Query: 726 PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
           PDVWI+SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH+CLDVQSFVEL
Sbjct: 124 PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 183

Query: 546 VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
           VHSSNGTTQ+G +YG  Q++  ++  SS+KG+KKNVS+VPSH +QTD+SDIKGE+ IFS+
Sbjct: 184 VHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSD 243

Query: 366 MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
           M+FYFVNVPP +SLDSLHKMV ENGG FSMN+N+SVTHCVAA++KG+K++AAK  GD+I+
Sbjct: 244 MVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIH 303

Query: 186 CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
            SW+ DCCSQ+KLL LQPKY+L LSDSSKKKL+EE+DEFSD Y+WDL++A+I+QLLSN++
Sbjct: 304 YSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVD 363

Query: 6   RS 1
           RS
Sbjct: 364 RS 365


>ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Citrus sinensis]
            gi|568840649|ref|XP_006474278.1| PREDICTED: DNA ligase
            4-like isoform X2 [Citrus sinensis]
          Length = 1174

 Score =  399 bits (1024), Expect = e-108
 Identities = 185/242 (76%), Positives = 223/242 (92%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVWI+SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH+CLDVQSFVEL
Sbjct: 555  PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 614

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQ+G +YG  Q++  ++  SS+KG+KKNVS+VPSH +QTD+SDIKGE+ IFS+
Sbjct: 615  VHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSD 674

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            M+FYFVNVPP +SLDSLHKMV ENGG FSMN+N+SVTHCVAA++KG+K++AAK  GD+I+
Sbjct: 675  MVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIH 734

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCCSQ+KLL LQPKY+L LSDSSKKKL+EE+DEFSD Y+WDL++A+I+QLLSN++
Sbjct: 735  YSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVD 794

Query: 6    RS 1
            RS
Sbjct: 795  RS 796


>ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
            gi|568840651|ref|XP_006474279.1| PREDICTED: DNA ligase
            4-like isoform X3 [Citrus sinensis]
            gi|557556466|gb|ESR66480.1| hypothetical protein
            CICLE_v10007283mg [Citrus clementina]
          Length = 1159

 Score =  399 bits (1024), Expect = e-108
 Identities = 185/242 (76%), Positives = 223/242 (92%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVWI+SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH+CLDVQSFVEL
Sbjct: 540  PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            VHSSNGTTQ+G +YG  Q++  ++  SS+KG+KKNVS+VPSH +QTD+SDIKGE+ IFS+
Sbjct: 600  VHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSD 659

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            M+FYFVNVPP +SLDSLHKMV ENGG FSMN+N+SVTHCVAA++KG+K++AAK  GD+I+
Sbjct: 660  MVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIH 719

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCCSQ+KLL LQPKY+L LSDSSKKKL+EE+DEFSD Y+WDL++A+I+QLLSN++
Sbjct: 720  YSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVD 779

Query: 6    RS 1
            RS
Sbjct: 780  RS 781


>ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
           gi|557556465|gb|ESR66479.1| hypothetical protein
           CICLE_v10007283mg [Citrus clementina]
          Length = 824

 Score =  399 bits (1024), Expect = e-108
 Identities = 185/242 (76%), Positives = 223/242 (92%)
 Frame = -1

Query: 726 PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
           PDVWI+SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH+CLDVQSFVEL
Sbjct: 205 PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 264

Query: 546 VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
           VHSSNGTTQ+G +YG  Q++  ++  SS+KG+KKNVS+VPSH +QTD+SDIKGE+ IFS+
Sbjct: 265 VHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSD 324

Query: 366 MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
           M+FYFVNVPP +SLDSLHKMV ENGG FSMN+N+SVTHCVAA++KG+K++AAK  GD+I+
Sbjct: 325 MVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGLKYEAAKRRGDVIH 384

Query: 186 CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
            SW+ DCCSQ+KLL LQPKY+L LSDSSKKKL+EE+DEFSD Y+WDL++A+I+QLLSN++
Sbjct: 385 YSWVLDCCSQKKLLQLQPKYYLHLSDSSKKKLQEEVDEFSDLYFWDLDLADIKQLLSNVD 444

Query: 6   RS 1
           RS
Sbjct: 445 RS 446


>ref|XP_008388689.1| PREDICTED: DNA ligase 4 [Malus domestica]
          Length = 1075

 Score =  391 bits (1004), Expect = e-106
 Identities = 181/242 (74%), Positives = 219/242 (90%)
 Frame = -1

Query: 726  PDVWIDSPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVEL 547
            PDVW++SPEKSIILSITSDIRTI+SEVF+APYSLRFPRIDRVRYDKPWHECLDVQSF+EL
Sbjct: 540  PDVWVESPEKSIILSITSDIRTIKSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFIEL 599

Query: 546  VHSSNGTTQRGADYGVEQNNNKRRTESSKKGDKKNVSVVPSHLIQTDISDIKGESLIFSN 367
            V + NGTTQRG DYG  Q+  K+  +S +K +K+N+S+VPSH +QTD+S +K ++L+FSN
Sbjct: 600  VQAGNGTTQRGTDYGGLQDTKKKSKKSPRKEEKRNLSIVPSHFVQTDVSGVKEDTLLFSN 659

Query: 366  MMFYFVNVPPTHSLDSLHKMVAENGGKFSMNMNSSVTHCVAAESKGIKFKAAKLYGDIIY 187
            MMFYFVNVPPTHS DSLHK+V ENGG FSMN+N++VTHCVAA+ KGIK++AAK +GDII+
Sbjct: 660  MMFYFVNVPPTHSFDSLHKLVVENGGTFSMNLNNAVTHCVAADGKGIKYQAAKHHGDIIH 719

Query: 186  CSWLFDCCSQRKLLPLQPKYFLFLSDSSKKKLEEEIDEFSDSYYWDLEIAEIQQLLSNIN 7
             SW+ DCCSQ+KLLPLQPKY+LFLSDSS KKL+EEID+FSDSYYWDL++AEI+QLL NI+
Sbjct: 720  ISWVLDCCSQKKLLPLQPKYYLFLSDSS-KKLQEEIDDFSDSYYWDLDLAEIKQLLINIH 778

Query: 6    RS 1
            RS
Sbjct: 779  RS 780


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