BLASTX nr result
ID: Cornus23_contig00026688
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00026688
(403 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009049788.1| hypothetical protein (mitochondrion) [Capsic... 110 3e-22
ref|YP_009045731.1| orf148b (mitochondrion) [Batis maritima] gi|... 99 4e-20
ref|NP_064047.1| orf169 gene product (mitochondrion) [Beta vulga... 89 1e-15
emb|CBJ23345.1| hypothetical protein [Beta vulgaris subsp. marit... 87 5e-15
gb|AHI16402.1| nad6, partial (mitochondrion) [Triticum turgidum ... 82 1e-13
gb|AGI48801.1| NADH dehydrogenase subunit 6 (mitochondrion) [Lol... 82 1e-13
ref|YP_398421.1| nad6 (mitochondrion) [Triticum aestivum] gi|556... 82 1e-13
gb|ADE08099.1| nad6-1 (mitochondrion) [Triticum aestivum] gi|291... 82 1e-13
ref|YP_002608398.1| NADH dehydrogenase subunit 6 [Vitis vinifera... 81 3e-13
ref|XP_006364255.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin... 79 2e-12
sp|P60497.1|NU6M_ARATH RecName: Full=NADH-ubiquinone oxidoreduct... 72 2e-10
ref|YP_717162.1| NADH dehydrogenase subunit 6 [Brassica napus] g... 72 2e-10
gb|ABC18241.1| NADH dehydrogenase subunit 6 [Brassica oleracea v... 72 2e-10
gb|AHC94298.1| NADH dehydrogenase subunit 6, partial (mitochondr... 72 2e-10
gb|AHA47115.1| NADH dehydrogenase subunit 6 (mitochondrion) [Amb... 72 2e-10
ref|YP_005090490.1| NADH dehydrogenase subunit 6 (mitochondrion)... 72 2e-10
ref|YP_005090449.1| NADH dehydrogenase subunit 6 (mitochondrion)... 72 2e-10
ref|YP_588429.1| NADH dehydrogenase subunit 6 (mitochondrion) [Z... 72 2e-10
gb|AAF86489.1|AF279442_1 NADH dehydrogenase subunit 6 [Lupinus l... 72 2e-10
gb|EPS74656.1| hypothetical protein M569_00092, partial [Genlise... 70 5e-10
>ref|YP_009049788.1| hypothetical protein (mitochondrion) [Capsicum annuum]
gi|667751745|gb|AIG89832.1| hypothetical protein
(mitochondrion) [Capsicum annuum]
gi|667752060|gb|AIG90146.1| hypothetical protein
(mitochondrion) [Capsicum annuum]
Length = 117
Score = 110 bits (276), Expect = 3e-22
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -3
Query: 221 MKVPFQGRTTYHDTFCFVEPCFGLWFDGCTC*KSGTFRFVFHPSLLRHFRFTSFV 57
MKVPFQGRTTY+DTF FVEPCFGLWFDGCTC KSGTFRFV HPSL +HFRFTSFV
Sbjct: 1 MKVPFQGRTTYYDTFRFVEPCFGLWFDGCTCKKSGTFRFVSHPSLSQHFRFTSFV 55
>ref|YP_009045731.1| orf148b (mitochondrion) [Batis maritima]
gi|655168505|gb|AIC83334.1| orf148b (mitochondrion)
[Batis maritima]
Length = 148
Score = 98.6 bits (244), Expect(2) = 4e-20
Identities = 53/71 (74%), Positives = 53/71 (74%), Gaps = 3/71 (4%)
Frame = +3
Query: 96 MKNKTECTGFLARTTIKPETKARLDKTESIMVRRPSLKWNFHAGARTRMKVDLLQPARLF 275
M NKTECTGFLAR TIKPETKA LDKTESIMVRRPSLKWNFHA ART MKVDL
Sbjct: 1 MGNKTECTGFLARATIKPETKAGLDKTESIMVRRPSLKWNFHAEARTSMKVDLFITTSAV 60
Query: 276 V---FHFILPS 299
V F F PS
Sbjct: 61 VRLSFSFSKPS 71
Score = 26.2 bits (56), Expect(2) = 4e-20
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1
Query: 367 FLCVQVDQRFG 399
FLC QVDQRFG
Sbjct: 93 FLCAQVDQRFG 103
>ref|NP_064047.1| orf169 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435071|ref|YP_004222289.1| hypothetical protein
BevumaM_p051 [Beta vulgaris subsp. maritima]
gi|346683271|ref|YP_004842203.1| hypothetical protein
BemaM_p159 [Beta macrocarpa] gi|9049347|dbj|BAA99357.1|
orf169 (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|317905724|emb|CBJ14109.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439804|emb|CBJ17516.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|345500189|emb|CBX25008.1| hypothetical protein [Beta
macrocarpa] gi|384939187|emb|CBL52034.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 169
Score = 89.4 bits (220), Expect = 1e-15
Identities = 54/93 (58%), Positives = 59/93 (63%), Gaps = 7/93 (7%)
Frame = +2
Query: 113 MYRIFSTYNHQTRDQSKARQNRKYHGTSSFPEMELSCW---SKNSHESRSITTSAVVRIS 283
MYRIFSTYNHQTRDQS+ARQNRKYHGTSSF EMELSCW + TTSAVV IS
Sbjct: 1 MYRIFSTYNHQTRDQSRARQNRKYHGTSSFTEMELSCWFGVRTSMKVDLLRTTSAVVHIS 60
Query: 284 FYXXXXXXXXXALTELLTESQI----SLDAENF 370
F + LL E + SLDA+NF
Sbjct: 61 F--------PSSKQALLGEHSLSYLRSLDADNF 85
>emb|CBJ23345.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 169
Score = 87.0 bits (214), Expect = 5e-15
Identities = 53/93 (56%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Frame = +2
Query: 113 MYRIFSTYNHQTRDQSKARQNRKYHGTSSFPEMELSCW---SKNSHESRSITTSAVVRIS 283
MYRI STYNHQTRDQS+ARQNRKYHGTSSF EMELSCW + TTSAVV IS
Sbjct: 1 MYRILSTYNHQTRDQSRARQNRKYHGTSSFTEMELSCWFGVRTSMKVDLLRTTSAVVHIS 60
Query: 284 FYXXXXXXXXXALTELLTESQI----SLDAENF 370
F + LL E + SLDA+NF
Sbjct: 61 F--------PSSKQALLGEHSLSYLRSLDADNF 85
>gb|AHI16402.1| nad6, partial (mitochondrion) [Triticum turgidum subsp. durum]
Length = 230
Score = 82.4 bits (202), Expect = 1e-13
Identities = 49/80 (61%), Positives = 52/80 (65%)
Frame = -1
Query: 241 MRVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 62
MR+LAPA KFHF+ GRRTMI VRAKNPVHSVLF ILVFCDTS
Sbjct: 1 MRLLAPAFKFHFKGGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLI 60
Query: 61 XXXLDFFAMIFLVVYIGAIA 2
LDF AMI VV+IGAIA
Sbjct: 61 LLGLDFSAMISPVVHIGAIA 80
>gb|AGI48801.1| NADH dehydrogenase subunit 6 (mitochondrion) [Lolium perenne]
Length = 314
Score = 82.4 bits (202), Expect = 1e-13
Identities = 49/80 (61%), Positives = 52/80 (65%)
Frame = -1
Query: 241 MRVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 62
MR+LAPA KFHF+ GRRTMI VRAKNPVHSVLF ILVFCDTS
Sbjct: 1 MRLLAPAFKFHFKGGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLI 60
Query: 61 XXXLDFFAMIFLVVYIGAIA 2
LDF AMI VV+IGAIA
Sbjct: 61 LLGLDFSAMISPVVHIGAIA 80
>ref|YP_398421.1| nad6 (mitochondrion) [Triticum aestivum]
gi|556927002|ref|YP_008757360.1| NADH dehydrogenase
subunit 6 (mitochondrion) [Aegilops speltoides]
gi|556927209|ref|YP_008758166.1| NADH dehydrogenase
subunit 6 (mitochondrion) [Triticum timopheevii]
gi|400642|sp|Q02500.1|NU6M_WHEAT RecName:
Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|21826|emb|CAA44009.1| NADH dehydrogenase (ubiquinone)
(mitochondrion) [Triticum aestivum]
gi|78675261|dbj|BAE47686.1| nad6 (mitochondrion)
[Triticum aestivum] gi|169649070|gb|ACA62631.1| nad6
(mitochondrion) [Triticum aestivum]
gi|549067756|dbj|BAN94728.1| NADH dehydrogenase subunit
6 (mitochondrion) [Triticum timopheevii]
gi|549067766|dbj|BAN94737.1| NADH dehydrogenase subunit
6 (mitochondrion) [Aegilops speltoides]
gi|578888268|gb|AHI16372.1| nad6 (mitochondrion)
[Triticum turgidum subsp. durum]
Length = 247
Score = 82.4 bits (202), Expect = 1e-13
Identities = 49/80 (61%), Positives = 52/80 (65%)
Frame = -1
Query: 241 MRVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 62
MR+LAPA KFHF+ GRRTMI VRAKNPVHSVLF ILVFCDTS
Sbjct: 1 MRLLAPAFKFHFKGGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLI 60
Query: 61 XXXLDFFAMIFLVVYIGAIA 2
LDF AMI VV+IGAIA
Sbjct: 61 LLGLDFSAMISPVVHIGAIA 80
>gb|ADE08099.1| nad6-1 (mitochondrion) [Triticum aestivum]
gi|291498626|gb|ADE08100.1| nad6-2 (mitochondrion)
[Triticum aestivum]
Length = 305
Score = 82.4 bits (202), Expect = 1e-13
Identities = 49/80 (61%), Positives = 52/80 (65%)
Frame = -1
Query: 241 MRVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 62
MR+LAPA KFHF+ GRRTMI VRAKNPVHSVLF ILVFCDTS
Sbjct: 1 MRLLAPAFKFHFKGGRRTMILSVLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLI 60
Query: 61 XXXLDFFAMIFLVVYIGAIA 2
LDF AMI VV+IGAIA
Sbjct: 61 LLGLDFSAMISPVVHIGAIA 80
>ref|YP_002608398.1| NADH dehydrogenase subunit 6 [Vitis vinifera]
gi|209954195|emb|CAQ77660.1| NADH dehydrogenase subunit
6 [Vitis vinifera] gi|239764731|gb|ACS15202.1| NADH
dehydrogenase subunit 6 [Vitis vinifera]
Length = 223
Score = 81.3 bits (199), Expect = 3e-13
Identities = 49/80 (61%), Positives = 51/80 (63%)
Frame = -1
Query: 241 MRVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 62
MRVLAPA KFHFREGRRTMI RAKNPVHSVLF I VF +TS
Sbjct: 1 MRVLAPALKFHFREGRRTMILSVSSSPALVSGLMVARAKNPVHSVLFPIPVFRNTSGLLL 60
Query: 61 XXXLDFFAMIFLVVYIGAIA 2
LDF AMIF VV+IGAIA
Sbjct: 61 LLGLDFSAMIFPVVHIGAIA 80
>ref|XP_006364255.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
chain 6-like [Solanum tuberosum]
Length = 349
Score = 78.6 bits (192), Expect = 2e-12
Identities = 48/80 (60%), Positives = 49/80 (61%)
Frame = -1
Query: 241 MRVLAPA*KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXX 62
M LAPA KFHFREGRRTMI VRA NPVHSV F I VF +TS
Sbjct: 1 MLFLAPAXKFHFREGRRTMILSILSRPALVSGLMVVRAXNPVHSVCFXIPVFRNTSGLLL 60
Query: 61 XXXLDFFAMIFLVVYIGAIA 2
LDFFAMIF VVYIGAIA
Sbjct: 61 LLGLDFFAMIFPVVYIGAIA 80
>sp|P60497.1|NU6M_ARATH RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
Length = 205
Score = 72.0 bits (175), Expect = 2e-10
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -1
Query: 133 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVYIGAIA 2
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVVYIGAIA
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIA 62
>ref|YP_717162.1| NADH dehydrogenase subunit 6 [Brassica napus]
gi|37591109|dbj|BAC98911.1| NADH dehydrogenase subunit 6
[Brassica napus]
Length = 205
Score = 72.0 bits (175), Expect = 2e-10
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -1
Query: 133 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVYIGAIA 2
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVVYIGAIA
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIA 62
>gb|ABC18241.1| NADH dehydrogenase subunit 6 [Brassica oleracea var. botrytis]
Length = 201
Score = 72.0 bits (175), Expect = 2e-10
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -1
Query: 133 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVYIGAIA 2
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVVYIGAIA
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIA 62
>gb|AHC94298.1| NADH dehydrogenase subunit 6, partial (mitochondrion) [Amborella
trichopoda]
Length = 178
Score = 72.0 bits (175), Expect = 2e-10
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -1
Query: 133 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVYIGAIA 2
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVVYIGAIA
Sbjct: 11 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIA 54
>gb|AHA47115.1| NADH dehydrogenase subunit 6 (mitochondrion) [Amborella trichopoda]
Length = 209
Score = 72.0 bits (175), Expect = 2e-10
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -1
Query: 133 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVYIGAIA 2
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVVYIGAIA
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIA 62
>ref|YP_005090490.1| NADH dehydrogenase subunit 6 (mitochondrion) [Lotus japonicus]
gi|357197354|gb|AET62950.1| NADH dehydrogenase subunit 6
(mitochondrion) [Lotus japonicus]
Length = 205
Score = 72.0 bits (175), Expect = 2e-10
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -1
Query: 133 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVYIGAIA 2
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVVYIGAIA
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIA 62
>ref|YP_005090449.1| NADH dehydrogenase subunit 6 (mitochondrion) [Millettia pinnata]
gi|357197312|gb|AET62909.1| NADH dehydrogenase subunit 6
(mitochondrion) [Millettia pinnata]
Length = 205
Score = 72.0 bits (175), Expect = 2e-10
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -1
Query: 133 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVYIGAIA 2
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVVYIGAIA
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIA 62
>ref|YP_588429.1| NADH dehydrogenase subunit 6 (mitochondrion) [Zea mays subsp. mays]
gi|40795022|gb|AAR91066.1| NADH dehydrogenase subunit 6
(mitochondrion) [Zea mays]
Length = 220
Score = 72.0 bits (175), Expect = 2e-10
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -1
Query: 133 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVYIGAIA 2
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVVYIGAIA
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLILLGLDFFAMIFLVVYIGAIA 62
>gb|AAF86489.1|AF279442_1 NADH dehydrogenase subunit 6 [Lupinus luteus]
Length = 205
Score = 72.0 bits (175), Expect = 2e-10
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = -1
Query: 133 RAKNPVHSVLFFILVFCDTSXXXXXXXLDFFAMIFLVVYIGAIA 2
RAKNPVHSVLFFILVFCDTS LDFFAMIFLVVYIGAIA
Sbjct: 19 RAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIA 62
>gb|EPS74656.1| hypothetical protein M569_00092, partial [Genlisea aurea]
Length = 214
Score = 70.5 bits (171), Expect = 5e-10
Identities = 43/72 (59%), Positives = 45/72 (62%)
Frame = -1
Query: 217 KFHFREGRRTMIXXXXXXXXXXXXXXXVRAKNPVHSVLFFILVFCDTSXXXXXXXLDFFA 38
KFHFRE RTMI VRAKNPVHSVLF I VF +TS LDFFA
Sbjct: 1 KFHFREVERTMILSVLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLFLGLDFFA 60
Query: 37 MIFLVVYIGAIA 2
MIFLVV+IGAIA
Sbjct: 61 MIFLVVHIGAIA 72