BLASTX nr result

ID: Cornus23_contig00026552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00026552
         (319 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDY67014.1| BnaUnng01810D, partial [Brassica napus]                66   9e-09
ref|XP_006354268.1| PREDICTED: uncharacterized protein LOC102588...    64   4e-08
emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]    64   4e-08
ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putati...    60   5e-07

>emb|CDY67014.1| BnaUnng01810D, partial [Brassica napus]
          Length = 451

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +2

Query: 224 FSTQALFGPAQFSHPSVQCTGLISWREKPKCS 319
           FS  ALFGPAQFS+PSVQCTGLISWREKPKCS
Sbjct: 59  FSAPALFGPAQFSYPSVQCTGLISWREKPKCS 90


>ref|XP_006354268.1| PREDICTED: uncharacterized protein LOC102588707 [Solanum tuberosum]
          Length = 610

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = +3

Query: 213 YLCVLAPKRFLGQLSSLIHRSNALGSSHGGKSQNV 317
           Y+   APKRFLGQLSSLIHRSNALGSSHGGKSQNV
Sbjct: 546 YIVRRAPKRFLGQLSSLIHRSNALGSSHGGKSQNV 580


>emb|CAN71466.1| hypothetical protein VITISV_038987 [Vitis vinifera]
          Length = 325

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = +3

Query: 213 YLCVLAPKRFLGQLSSLIHRSNALGSSHGGKSQNV 317
           Y+   APKRFLGQLSSLIHRSNALGSSHGGKSQNV
Sbjct: 56  YIVRRAPKRFLGQLSSLIHRSNALGSSHGGKSQNV 90


>ref|XP_002534687.1| NADH-ubiquinone oxidoreductase chain, putative [Ricinus communis]
           gi|223524771|gb|EEF27701.1| NADH-ubiquinone
           oxidoreductase chain, putative [Ricinus communis]
          Length = 366

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +3

Query: 213 YLCVLAPKRFLGQLSSLIHRSNALGSSHGGKSQNV 317
           Y+   APKRFLGQLSSLIHRSNALGSSHGGK +NV
Sbjct: 300 YILRRAPKRFLGQLSSLIHRSNALGSSHGGKRKNV 334


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