BLASTX nr result

ID: Cornus23_contig00026546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00026546
         (283 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63828.1| hypothetical protein VITISV_006636 [Vitis vinifera]    54   2e-08
ref|XP_010660509.1| PREDICTED: LOW QUALITY PROTEIN: protein GAME...    54   2e-08
ref|XP_011046786.1| PREDICTED: protein GAMETE EXPRESSED 3 [Popul...    51   3e-08
ref|XP_002305959.2| hypothetical protein POPTR_0004s10420g [Popu...    51   9e-08
emb|CDP02395.1| unnamed protein product [Coffea canephora]             55   9e-07
ref|XP_011467832.1| PREDICTED: protein GAMETE EXPRESSED 3 [Fraga...    40   3e-06
ref|XP_006346875.1| PREDICTED: protein GAMETE EXPRESSED 3-like [...    47   7e-06

>emb|CAN63828.1| hypothetical protein VITISV_006636 [Vitis vinifera]
          Length = 1017

 Score = 54.3 bits (129), Expect(2) = 2e-08
 Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = +2

Query: 68  SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSA----VKAKAKAPIELRS 235
           SYSF+G KKESVTIFH              +     +ED +SA     KAKAKAPI   S
Sbjct: 705 SYSFQGAKKESVTIFHTVSDASSGESYSDREISWHSFEDKESAAKAKAKAKAKAPIADGS 764

Query: 236 SSDDGNYEDNNLGSPS 283
           SSDD   +++ LGS S
Sbjct: 765 SSDDRICKEDYLGSSS 780



 Score = 30.8 bits (68), Expect(2) = 2e-08
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 3   LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
           LGRD      K+LLPL+DGKT +  F+  +K
Sbjct: 683 LGRDVTGLHRKTLLPLYDGKTRSYSFQGAKK 713


>ref|XP_010660509.1| PREDICTED: LOW QUALITY PROTEIN: protein GAMETE EXPRESSED 3 [Vitis
           vinifera]
          Length = 669

 Score = 54.3 bits (129), Expect(2) = 2e-08
 Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = +2

Query: 68  SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSA----VKAKAKAPIELRS 235
           SYSF+G KKESVTIFH              +     +ED +SA     KAKAKAPI   S
Sbjct: 539 SYSFQGAKKESVTIFHTVSDASSGESYSDREISWHSFEDKESAAKAKAKAKAKAPIADGS 598

Query: 236 SSDDGNYEDNNLGSPS 283
           SSDD   +++ LGS S
Sbjct: 599 SSDDRICKEDYLGSSS 614



 Score = 30.8 bits (68), Expect(2) = 2e-08
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 3   LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
           LGRD      K+LLPL+DGKT +  F+  +K
Sbjct: 517 LGRDVTGLHRKTLLPLYDGKTRSYSFQGAKK 547


>ref|XP_011046786.1| PREDICTED: protein GAMETE EXPRESSED 3 [Populus euphratica]
          Length = 683

 Score = 50.8 bits (120), Expect(2) = 3e-08
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
 Frame = +2

Query: 68  SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSAV--KAKAKAPIELRSSS 241
           SYSF+  +KESVTIFH               +D+  +E+ +S+   K KA+AP+E  SSS
Sbjct: 558 SYSFQSARKESVTIFHTLSNTSSGESSKEKDSDRDFHEENQSSAKGKGKARAPVETESSS 617

Query: 242 DDGNYE 259
           DD  +E
Sbjct: 618 DDDIFE 623



 Score = 33.5 bits (75), Expect(2) = 3e-08
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +3

Query: 3   LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
           LGRD    +SKSLLP++DGK+ +  F+  RK
Sbjct: 536 LGRDGKGLRSKSLLPVYDGKSRSYSFQSARK 566


>ref|XP_002305959.2| hypothetical protein POPTR_0004s10420g [Populus trichocarpa]
           gi|550340742|gb|EEE86470.2| hypothetical protein
           POPTR_0004s10420g [Populus trichocarpa]
          Length = 674

 Score = 50.8 bits (120), Expect(2) = 9e-08
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
 Frame = +2

Query: 68  SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSAV--KAKAKAPIELRSSS 241
           SYSF+  +KESVTIFH               +D+  +E+ +S+   K KA+AP+E  SSS
Sbjct: 546 SYSFQSARKESVTIFHTLSNTSSGESSKEKDSDRDFHEENQSSAKGKGKARAPVETESSS 605

Query: 242 DDGNYE 259
           DD  +E
Sbjct: 606 DDDIFE 611



 Score = 32.0 bits (71), Expect(2) = 9e-08
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +3

Query: 3   LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
           LGRD    +S+SLLP++DGK+ +  F+  RK
Sbjct: 524 LGRDGKGLRSESLLPVYDGKSRSYSFQSARK 554


>emb|CDP02395.1| unnamed protein product [Coffea canephora]
          Length = 714

 Score = 54.7 bits (130), Expect(2) = 9e-07
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = +2

Query: 68  SYSFRG-TKKESVTIFHXXXXXXXXXXXXXN-KADQTLYEDMKSAVKAKAKAPIELRSSS 241
           SYSF+G TK+ SVTIFH                AD+ L E+  S VK K KAP+E++SSS
Sbjct: 570 SYSFQGATKEASVTIFHTFSDTDTSSGGSTEFGADEDLPEEKDSTVKGKGKAPVEVQSSS 629

Query: 242 DDGNYEDNNLGSPS 283
           D+  YE+++  SPS
Sbjct: 630 DNEIYEEDHRISPS 643



 Score = 24.6 bits (52), Expect(2) = 9e-07
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 3   LGRDRDSSQSKSLLPLHDGKT*AILFE 83
           LGRD    Q K +LPL +GK  +  F+
Sbjct: 548 LGRDGAGLQPKPVLPLSNGKARSYSFQ 574


>ref|XP_011467832.1| PREDICTED: protein GAMETE EXPRESSED 3 [Fragaria vesca subsp. vesca]
          Length = 663

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +3

Query: 3   LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
           LGRDR +S+SKSLLPL+DGKT +  F+  +K
Sbjct: 534 LGRDRITSRSKSLLPLYDGKTRSYYFQGAKK 564



 Score = 37.7 bits (86), Expect(2) = 3e-06
 Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +2

Query: 68  SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSAVKAKAKAPIELRSSS-- 241
           SY F+G KKESVT+FH                    YE+       K K P+E  SSS  
Sbjct: 556 SYYFQGAKKESVTVFHTLSDTSSSKEHSSEGESSWTYEE-------KGKEPLEQESSSSH 608

Query: 242 DDGNYEDNNLGSPS 283
           +DG +  +   SPS
Sbjct: 609 EDGFFTKDYRRSPS 622


>ref|XP_006346875.1| PREDICTED: protein GAMETE EXPRESSED 3-like [Solanum tuberosum]
          Length = 668

 Score = 47.4 bits (111), Expect(2) = 7e-06
 Identities = 26/65 (40%), Positives = 36/65 (55%)
 Frame = +2

Query: 68  SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSAVKAKAKAPIELRSSSDD 247
           S+SF+G KKESVT+FH               +D  + ED +     K K+PIE+ SSSDD
Sbjct: 554 SFSFQGAKKESVTLFHTVSDTSSETSWSERDSDTNISEDEEET--DKGKSPIEIFSSSDD 611

Query: 248 GNYED 262
             Y++
Sbjct: 612 EIYQE 616



 Score = 28.9 bits (63), Expect(2) = 7e-06
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 3   LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
           LGRD    +S SLLPL D KT +  F+  +K
Sbjct: 532 LGRDEIGPRSPSLLPLSDRKTRSFSFQGAKK 562


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