BLASTX nr result
ID: Cornus23_contig00026546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00026546
(283 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN63828.1| hypothetical protein VITISV_006636 [Vitis vinifera] 54 2e-08
ref|XP_010660509.1| PREDICTED: LOW QUALITY PROTEIN: protein GAME... 54 2e-08
ref|XP_011046786.1| PREDICTED: protein GAMETE EXPRESSED 3 [Popul... 51 3e-08
ref|XP_002305959.2| hypothetical protein POPTR_0004s10420g [Popu... 51 9e-08
emb|CDP02395.1| unnamed protein product [Coffea canephora] 55 9e-07
ref|XP_011467832.1| PREDICTED: protein GAMETE EXPRESSED 3 [Fraga... 40 3e-06
ref|XP_006346875.1| PREDICTED: protein GAMETE EXPRESSED 3-like [... 47 7e-06
>emb|CAN63828.1| hypothetical protein VITISV_006636 [Vitis vinifera]
Length = 1017
Score = 54.3 bits (129), Expect(2) = 2e-08
Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +2
Query: 68 SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSA----VKAKAKAPIELRS 235
SYSF+G KKESVTIFH + +ED +SA KAKAKAPI S
Sbjct: 705 SYSFQGAKKESVTIFHTVSDASSGESYSDREISWHSFEDKESAAKAKAKAKAKAPIADGS 764
Query: 236 SSDDGNYEDNNLGSPS 283
SSDD +++ LGS S
Sbjct: 765 SSDDRICKEDYLGSSS 780
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 3 LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
LGRD K+LLPL+DGKT + F+ +K
Sbjct: 683 LGRDVTGLHRKTLLPLYDGKTRSYSFQGAKK 713
>ref|XP_010660509.1| PREDICTED: LOW QUALITY PROTEIN: protein GAMETE EXPRESSED 3 [Vitis
vinifera]
Length = 669
Score = 54.3 bits (129), Expect(2) = 2e-08
Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +2
Query: 68 SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSA----VKAKAKAPIELRS 235
SYSF+G KKESVTIFH + +ED +SA KAKAKAPI S
Sbjct: 539 SYSFQGAKKESVTIFHTVSDASSGESYSDREISWHSFEDKESAAKAKAKAKAKAPIADGS 598
Query: 236 SSDDGNYEDNNLGSPS 283
SSDD +++ LGS S
Sbjct: 599 SSDDRICKEDYLGSSS 614
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 3 LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
LGRD K+LLPL+DGKT + F+ +K
Sbjct: 517 LGRDVTGLHRKTLLPLYDGKTRSYSFQGAKK 547
>ref|XP_011046786.1| PREDICTED: protein GAMETE EXPRESSED 3 [Populus euphratica]
Length = 683
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 68 SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSAV--KAKAKAPIELRSSS 241
SYSF+ +KESVTIFH +D+ +E+ +S+ K KA+AP+E SSS
Sbjct: 558 SYSFQSARKESVTIFHTLSNTSSGESSKEKDSDRDFHEENQSSAKGKGKARAPVETESSS 617
Query: 242 DDGNYE 259
DD +E
Sbjct: 618 DDDIFE 623
Score = 33.5 bits (75), Expect(2) = 3e-08
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 3 LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
LGRD +SKSLLP++DGK+ + F+ RK
Sbjct: 536 LGRDGKGLRSKSLLPVYDGKSRSYSFQSARK 566
>ref|XP_002305959.2| hypothetical protein POPTR_0004s10420g [Populus trichocarpa]
gi|550340742|gb|EEE86470.2| hypothetical protein
POPTR_0004s10420g [Populus trichocarpa]
Length = 674
Score = 50.8 bits (120), Expect(2) = 9e-08
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 68 SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSAV--KAKAKAPIELRSSS 241
SYSF+ +KESVTIFH +D+ +E+ +S+ K KA+AP+E SSS
Sbjct: 546 SYSFQSARKESVTIFHTLSNTSSGESSKEKDSDRDFHEENQSSAKGKGKARAPVETESSS 605
Query: 242 DDGNYE 259
DD +E
Sbjct: 606 DDDIFE 611
Score = 32.0 bits (71), Expect(2) = 9e-08
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 3 LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
LGRD +S+SLLP++DGK+ + F+ RK
Sbjct: 524 LGRDGKGLRSESLLPVYDGKSRSYSFQSARK 554
>emb|CDP02395.1| unnamed protein product [Coffea canephora]
Length = 714
Score = 54.7 bits (130), Expect(2) = 9e-07
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +2
Query: 68 SYSFRG-TKKESVTIFHXXXXXXXXXXXXXN-KADQTLYEDMKSAVKAKAKAPIELRSSS 241
SYSF+G TK+ SVTIFH AD+ L E+ S VK K KAP+E++SSS
Sbjct: 570 SYSFQGATKEASVTIFHTFSDTDTSSGGSTEFGADEDLPEEKDSTVKGKGKAPVEVQSSS 629
Query: 242 DDGNYEDNNLGSPS 283
D+ YE+++ SPS
Sbjct: 630 DNEIYEEDHRISPS 643
Score = 24.6 bits (52), Expect(2) = 9e-07
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 3 LGRDRDSSQSKSLLPLHDGKT*AILFE 83
LGRD Q K +LPL +GK + F+
Sbjct: 548 LGRDGAGLQPKPVLPLSNGKARSYSFQ 574
>ref|XP_011467832.1| PREDICTED: protein GAMETE EXPRESSED 3 [Fragaria vesca subsp. vesca]
Length = 663
Score = 39.7 bits (91), Expect(2) = 3e-06
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +3
Query: 3 LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
LGRDR +S+SKSLLPL+DGKT + F+ +K
Sbjct: 534 LGRDRITSRSKSLLPLYDGKTRSYYFQGAKK 564
Score = 37.7 bits (86), Expect(2) = 3e-06
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 68 SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSAVKAKAKAPIELRSSS-- 241
SY F+G KKESVT+FH YE+ K K P+E SSS
Sbjct: 556 SYYFQGAKKESVTVFHTLSDTSSSKEHSSEGESSWTYEE-------KGKEPLEQESSSSH 608
Query: 242 DDGNYEDNNLGSPS 283
+DG + + SPS
Sbjct: 609 EDGFFTKDYRRSPS 622
>ref|XP_006346875.1| PREDICTED: protein GAMETE EXPRESSED 3-like [Solanum tuberosum]
Length = 668
Score = 47.4 bits (111), Expect(2) = 7e-06
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +2
Query: 68 SYSFRGTKKESVTIFHXXXXXXXXXXXXXNKADQTLYEDMKSAVKAKAKAPIELRSSSDD 247
S+SF+G KKESVT+FH +D + ED + K K+PIE+ SSSDD
Sbjct: 554 SFSFQGAKKESVTLFHTVSDTSSETSWSERDSDTNISEDEEET--DKGKSPIEIFSSSDD 611
Query: 248 GNYED 262
Y++
Sbjct: 612 EIYQE 616
Score = 28.9 bits (63), Expect(2) = 7e-06
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 3 LGRDRDSSQSKSLLPLHDGKT*AILFEVQRK 95
LGRD +S SLLPL D KT + F+ +K
Sbjct: 532 LGRDEIGPRSPSLLPLSDRKTRSFSFQGAKK 562