BLASTX nr result
ID: Cornus23_contig00026430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00026430
(259 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010654615.1| PREDICTED: nuclear poly(A) polymerase 4-like... 75 2e-11
ref|XP_010654614.1| PREDICTED: nuclear poly(A) polymerase 4-like... 75 2e-11
emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera] 75 2e-11
emb|CDO97968.1| unnamed protein product [Coffea canephora] 73 7e-11
ref|XP_002515957.1| nucleic acid binding protein, putative [Rici... 60 5e-07
ref|XP_007216443.1| hypothetical protein PRUPE_ppa022017mg, part... 58 3e-06
ref|XP_008228415.1| PREDICTED: poly(A) polymerase alpha-like iso... 57 5e-06
ref|XP_008228414.1| PREDICTED: poly(A) polymerase type 3-like is... 57 5e-06
ref|XP_008228413.1| PREDICTED: poly(A) polymerase type 3-like is... 57 5e-06
gb|KHG18561.1| Poly (A) polymerase [Gossypium arboreum] gi|72884... 56 9e-06
>ref|XP_010654615.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Vitis
vinifera]
Length = 755
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/80 (51%), Positives = 53/80 (66%)
Frame = -2
Query: 249 EVHRSGSGEGCLKRKRDFEGLDGKQDRPEKRQLISPQRQHSVSPEIISHKFFCGLSKQCM 70
E R+GS E +KRK+D E +D +QD+ KR ISPQRQ SVSPEIISH+ F S++C
Sbjct: 512 EACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPEIISHR-FSSSSQECS 570
Query: 69 PLGFIRTKESAEMNGECQVG 10
G + KE E + +CQVG
Sbjct: 571 ASGSAKAKEIVEGDRKCQVG 590
>ref|XP_010654614.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X1 [Vitis
vinifera]
Length = 756
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/80 (51%), Positives = 53/80 (66%)
Frame = -2
Query: 249 EVHRSGSGEGCLKRKRDFEGLDGKQDRPEKRQLISPQRQHSVSPEIISHKFFCGLSKQCM 70
E R+GS E +KRK+D E +D +QD+ KR ISPQRQ SVSPEIISH+ F S++C
Sbjct: 512 EACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPEIISHR-FSSSSQECS 570
Query: 69 PLGFIRTKESAEMNGECQVG 10
G + KE E + +CQVG
Sbjct: 571 ASGSAKAKEIVEGDRKCQVG 590
>emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 74.7 bits (182), Expect = 2e-11
Identities = 41/80 (51%), Positives = 53/80 (66%)
Frame = -2
Query: 249 EVHRSGSGEGCLKRKRDFEGLDGKQDRPEKRQLISPQRQHSVSPEIISHKFFCGLSKQCM 70
E R+GS E +KRK+D E +D +QD+ KR ISPQRQ SVSPEIISH+ F S++C
Sbjct: 503 EACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPEIISHR-FSSSSQECS 561
Query: 69 PLGFIRTKESAEMNGECQVG 10
G + KE E + +CQVG
Sbjct: 562 ASGSAKAKEIVEGDRKCQVG 581
>emb|CDO97968.1| unnamed protein product [Coffea canephora]
Length = 767
Score = 73.2 bits (178), Expect = 7e-11
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = -2
Query: 255 DGEVHRSGSGEGCLKRKRDFEGLDGKQDRPEKRQLISPQRQHSVSPEIISHKFFCGLSKQ 76
+GE++RSGS E CL RKR+ EG + Q PEKRQ I PQR+ S+SP+++ K L+ +
Sbjct: 525 NGEIYRSGSTERCLNRKRELEGSENNQVSPEKRQSIRPQRRDSMSPDLLGVKNGIALN-E 583
Query: 75 CMPLGFIRTKESAEMNGECQVGT 7
C +R E AE NG C G+
Sbjct: 584 CSSTVLVRGMEGAEANGLCLSGS 606
>ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 712
Score = 60.5 bits (145), Expect = 5e-07
Identities = 31/61 (50%), Positives = 41/61 (67%)
Frame = -2
Query: 255 DGEVHRSGSGEGCLKRKRDFEGLDGKQDRPEKRQLISPQRQHSVSPEIISHKFFCGLSKQ 76
D + + +GS E KRK+D + +D K D PEKR ISPQR+ SVSP+I +HK F G S +
Sbjct: 479 DSDAYGNGSSERGHKRKKDSDEIDVKNDMPEKRNSISPQRRDSVSPDIFTHK-FGGPSSE 537
Query: 75 C 73
C
Sbjct: 538 C 538
>ref|XP_007216443.1| hypothetical protein PRUPE_ppa022017mg, partial [Prunus persica]
gi|462412593|gb|EMJ17642.1| hypothetical protein
PRUPE_ppa022017mg, partial [Prunus persica]
Length = 581
Score = 57.8 bits (138), Expect = 3e-06
Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -2
Query: 255 DGEVHRSGSGEGCLKRKRDFEGLDGKQDRP-EKRQLISPQRQHSVSPEIISHK 100
DGEV +GSGE LKRK+D +G+D Q P EKRQ +SPQ + SVSP IIS K
Sbjct: 518 DGEVSMTGSGERHLKRKKDLDGVDVNQVMPLEKRQSLSPQPRDSVSPVIISDK 570
>ref|XP_008228415.1| PREDICTED: poly(A) polymerase alpha-like isoform X3 [Prunus mume]
Length = 574
Score = 57.0 bits (136), Expect = 5e-06
Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -2
Query: 255 DGEVHRSGSGEGCLKRKRDFEGLDGKQDRP-EKRQLISPQRQHSVSPEIISHK 100
DGEV +GSGE LKRK+D +G+D Q P EKRQ +SPQ + SVSP IIS K
Sbjct: 377 DGEVSVTGSGERHLKRKKDLDGVDVNQVMPLEKRQSLSPQPRDSVSPVIISDK 429
>ref|XP_008228414.1| PREDICTED: poly(A) polymerase type 3-like isoform X2 [Prunus mume]
Length = 714
Score = 57.0 bits (136), Expect = 5e-06
Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -2
Query: 255 DGEVHRSGSGEGCLKRKRDFEGLDGKQDRP-EKRQLISPQRQHSVSPEIISHK 100
DGEV +GSGE LKRK+D +G+D Q P EKRQ +SPQ + SVSP IIS K
Sbjct: 518 DGEVSVTGSGERHLKRKKDLDGVDVNQVMPLEKRQSLSPQPRDSVSPVIISDK 570
>ref|XP_008228413.1| PREDICTED: poly(A) polymerase type 3-like isoform X1 [Prunus mume]
Length = 715
Score = 57.0 bits (136), Expect = 5e-06
Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -2
Query: 255 DGEVHRSGSGEGCLKRKRDFEGLDGKQDRP-EKRQLISPQRQHSVSPEIISHK 100
DGEV +GSGE LKRK+D +G+D Q P EKRQ +SPQ + SVSP IIS K
Sbjct: 518 DGEVSVTGSGERHLKRKKDLDGVDVNQVMPLEKRQSLSPQPRDSVSPVIISDK 570
>gb|KHG18561.1| Poly (A) polymerase [Gossypium arboreum]
gi|728842973|gb|KHG22416.1| Poly (A) polymerase
[Gossypium arboreum]
Length = 695
Score = 56.2 bits (134), Expect = 9e-06
Identities = 36/83 (43%), Positives = 47/83 (56%)
Frame = -2
Query: 255 DGEVHRSGSGEGCLKRKRDFEGLDGKQDRPEKRQLISPQRQHSVSPEIISHKFFCGLSKQ 76
+G +++ SGE CLKRK+D +G D +Q R +KR+ SP R SVSPEIIS C L
Sbjct: 519 NGVAYQAESGEKCLKRKKDPDGEDSEQSRLDKRR--SPDRNQSVSPEIIS----CKLGST 572
Query: 75 CMPLGFIRTKESAEMNGECQVGT 7
C T + EMN +V T
Sbjct: 573 CTGCS---TSDLDEMNRFAEVNT 592