BLASTX nr result
ID: Cornus23_contig00026336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00026336
(379 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD,... 152 9e-35
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 152 9e-35
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,... 145 1e-32
ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun... 143 6e-32
ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus nota... 137 4e-30
gb|KDO83322.1| hypothetical protein CISIN_1g046578mg [Citrus sin... 136 5e-30
ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD,... 135 1e-29
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,... 135 1e-29
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr... 135 1e-29
ref|XP_009354359.1| PREDICTED: RNA polymerase sigma factor sigD,... 135 2e-29
ref|XP_011089039.1| PREDICTED: RNA polymerase sigma factor sigD,... 134 3e-29
ref|XP_008231483.1| PREDICTED: RNA polymerase sigma factor sigD,... 132 8e-29
ref|XP_008350435.1| PREDICTED: RNA polymerase sigma factor sigD,... 131 2e-28
ref|XP_010324724.1| PREDICTED: RNA polymerase sigma factor sigD,... 130 5e-28
ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD,... 129 8e-28
ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phas... 129 8e-28
ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phas... 129 8e-28
ref|XP_007148892.1| hypothetical protein PHAVU_005G023100g [Phas... 129 8e-28
emb|CDP17818.1| unnamed protein product [Coffea canephora] 129 1e-27
ref|XP_012065613.1| PREDICTED: RNA polymerase sigma factor sigD,... 127 4e-27
>ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Vitis
vinifera]
Length = 442
Score = 152 bits (384), Expect = 9e-35
Identities = 73/99 (73%), Positives = 87/99 (87%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSF 200
QGCMTLQEIIPGPD T P+ MVK+QLMKQEVE LNTLC+REA ILRL++G+NGE P SF
Sbjct: 344 QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 403
Query: 199 EDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
E+IGRL+KLSRERVRQIN +A+ KL+QT +VD LK+Y+M
Sbjct: 404 EEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYMM 442
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 152 bits (384), Expect = 9e-35
Identities = 73/99 (73%), Positives = 87/99 (87%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSF 200
QGCMTLQEIIPGPD T P+ MVK+QLMKQEVE LNTLC+REA ILRL++G+NGE P SF
Sbjct: 221 QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 280
Query: 199 EDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
E+IGRL+KLSRERVRQIN +A+ KL+QT +VD LK+Y+M
Sbjct: 281 EEIGRLMKLSRERVRQINSIALSKLRQTSVVDYLKLYMM 319
>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
[Fragaria vesca subsp. vesca]
Length = 452
Score = 145 bits (365), Expect = 1e-32
Identities = 69/99 (69%), Positives = 85/99 (85%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSF 200
QGCM LQ+II GPD PETM+KKQLMKQE+E LLN L DREA +LRLH+GLNG+ PQSF
Sbjct: 354 QGCMALQDIIRGPDEMMPETMLKKQLMKQEMEKLLNRLSDREAEVLRLHFGLNGDTPQSF 413
Query: 199 EDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
E+IGRLLKLSRERVRQIN +A+ KL+QT +++LK+Y++
Sbjct: 414 EEIGRLLKLSRERVRQINSIALSKLKQTSTLEDLKLYIV 452
>ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
gi|462415663|gb|EMJ20400.1| hypothetical protein
PRUPE_ppa017025mg [Prunus persica]
Length = 440
Score = 143 bits (360), Expect = 6e-32
Identities = 70/99 (70%), Positives = 85/99 (85%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSF 200
+G MTLQEII GP+ PE M+ +QLMKQEVE LL TL DREAN+LRLH+GLNGE PQSF
Sbjct: 342 RGSMTLQEIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDREANVLRLHFGLNGESPQSF 401
Query: 199 EDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
E+IGRLLKLSRERVRQIN +A+ KL+QT ++DNLK+Y++
Sbjct: 402 EEIGRLLKLSRERVRQINGIALSKLRQTSILDNLKLYIV 440
>ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus notabilis]
gi|587907279|gb|EXB95293.1| RNA polymerase sigma factor
rpoD [Morus notabilis]
Length = 422
Score = 137 bits (344), Expect = 4e-30
Identities = 67/97 (69%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNT-LCDREANILRLHYGLNGEIPQS 203
+GCMTLQEIIPGP+ PE MV+KQLMKQE+E LL T L DREAN+LRLH+GL+G+IP S
Sbjct: 321 RGCMTLQEIIPGPEEISPEKMVRKQLMKQEIEKLLKTVLSDREANVLRLHFGLSGDIPLS 380
Query: 202 FEDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKV 92
E+IGRLLKLSRER+RQIN +A+ KLQQT +V++L++
Sbjct: 381 CEEIGRLLKLSRERIRQINGIALSKLQQTNIVNDLRI 417
>gb|KDO83322.1| hypothetical protein CISIN_1g046578mg [Citrus sinensis]
Length = 379
Score = 136 bits (343), Expect = 5e-30
Identities = 64/99 (64%), Positives = 85/99 (85%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSF 200
+GCMT+Q+IIPGPD T PE MV+KQLMKQE++ LL TL +REA+ILRLH+GL+G+ P S
Sbjct: 281 RGCMTMQDIIPGPDETMPERMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSC 340
Query: 199 EDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
++IGRLL LSRER+RQI +A+ KLQQT +++NLKVY++
Sbjct: 341 KEIGRLLSLSRERIRQIRGIALTKLQQTNILNNLKVYMV 379
>ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Nelumbo
nucifera]
Length = 455
Score = 135 bits (340), Expect = 1e-29
Identities = 66/98 (67%), Positives = 81/98 (82%)
Frame = -1
Query: 376 GCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSFE 197
GCM LQEII GP+ T PETMV +QLMKQEVE LL L +REANILRL++GLNGE P SFE
Sbjct: 358 GCMKLQEIISGPEETTPETMVNRQLMKQEVERLLKILGEREANILRLYFGLNGETPCSFE 417
Query: 196 DIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
+IGRLL LSRERVRQI ++A+ KLQQ+ +D+L++Y +
Sbjct: 418 EIGRLLNLSRERVRQIYYIALAKLQQSNTIDDLRLYFL 455
>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Citrus sinensis]
Length = 436
Score = 135 bits (340), Expect = 1e-29
Identities = 66/98 (67%), Positives = 83/98 (84%)
Frame = -1
Query: 376 GCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSFE 197
GCMTLQ+IIPGPD T PE MV+KQLMKQE++ LL TL +REA+ILRLH+GL+G+ P S +
Sbjct: 339 GCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSCK 398
Query: 196 DIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
+IGRLL LSRERVRQI +A+ KLQQT + +NLKVY++
Sbjct: 399 EIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVYMV 436
>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
gi|557541154|gb|ESR52198.1| hypothetical protein
CICLE_v10033747mg [Citrus clementina]
Length = 436
Score = 135 bits (340), Expect = 1e-29
Identities = 66/98 (67%), Positives = 83/98 (84%)
Frame = -1
Query: 376 GCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSFE 197
GCMTLQ+IIPGPD T PE MV+KQLMKQE++ LL TL +REA+ILRLH+GL+G+ P S +
Sbjct: 339 GCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSCK 398
Query: 196 DIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
+IGRLL LSRERVRQI +A+ KLQQT + +NLKVY++
Sbjct: 399 EIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVYMV 436
>ref|XP_009354359.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Pyrus x
bretschneideri]
Length = 436
Score = 135 bits (339), Expect = 2e-29
Identities = 66/99 (66%), Positives = 82/99 (82%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSF 200
QGCM+LQEI+ GP+ PE M+ KQLMKQEVE LL TL DREA +LRL +GL+GE P+SF
Sbjct: 338 QGCMSLQEIMQGPEEMMPEKMLTKQLMKQEVEKLLKTLSDREAYVLRLRFGLHGETPKSF 397
Query: 199 EDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
E+IGRLLKLSRERVRQIN +A+ KL+QT +NLK+Y++
Sbjct: 398 EEIGRLLKLSRERVRQINGIALSKLKQTSTFNNLKLYIV 436
>ref|XP_011089039.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Sesamum
indicum]
Length = 446
Score = 134 bits (337), Expect = 3e-29
Identities = 63/98 (64%), Positives = 80/98 (81%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSF 200
QGCM+LQ+I+ GPD PE MVKK +K E++ LL LCDREA+ILRLHYGLNGE P SF
Sbjct: 349 QGCMSLQDIVAGPDEITPEAMVKKDQLKPEIQKLLKPLCDREAHILRLHYGLNGETPWSF 408
Query: 199 EDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYL 86
E+IGR+L+LSRERVRQIN A+LK++QT V++LK ++
Sbjct: 409 EEIGRVLELSRERVRQINSAALLKIRQTSKVEDLKHFI 446
>ref|XP_008231483.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Prunus
mume]
Length = 442
Score = 132 bits (333), Expect = 8e-29
Identities = 67/94 (71%), Positives = 78/94 (82%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSF 200
+G MTLQEII GP+ PE M+ +QLMKQEVE LL TL DREAN+LRLH+GLNGE PQSF
Sbjct: 342 RGSMTLQEIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDREANVLRLHFGLNGESPQSF 401
Query: 199 EDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNL 98
E+IGRLLKLSRERVRQIN +A+ KL+QT +D L
Sbjct: 402 EEIGRLLKLSRERVRQINGIALSKLRQTSTLDIL 435
>ref|XP_008350435.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Malus
domestica]
Length = 280
Score = 131 bits (330), Expect = 2e-28
Identities = 65/94 (69%), Positives = 78/94 (82%)
Frame = -1
Query: 364 LQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSFEDIGR 185
LQEI+ GP+ PE M+ KQLMKQEVE LL TL DREA +LRLH+GL+GE P+SFEDIGR
Sbjct: 187 LQEIMQGPEEMMPEKMLTKQLMKQEVEKLLKTLSDREAYVLRLHFGLHGETPKSFEDIGR 246
Query: 184 LLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
LLKLSRERVRQIN +A+ KL+QT DNLK+Y++
Sbjct: 247 LLKLSRERVRQINGIALSKLKQTSTFDNLKLYIV 280
>ref|XP_010324724.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X1 [Solanum lycopersicum]
Length = 423
Score = 130 bits (326), Expect = 5e-28
Identities = 62/99 (62%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLL-NTLCDREANILRLHYGLNGEIPQS 203
QG M+LQ II GP+ T PE VK+Q+MKQ++E +L N LCDREA IL+LH+GLNG+ PQS
Sbjct: 324 QGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILQNVLCDREAKILKLHFGLNGDTPQS 383
Query: 202 FEDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYL 86
FE+IGR+LKLSRER+RQIN A+ KL+++ M+DN K+Y+
Sbjct: 384 FEEIGRVLKLSRERIRQINCTALSKLRESSMLDNFKMYI 422
>ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Solanum tuberosum]
Length = 421
Score = 129 bits (324), Expect = 8e-28
Identities = 62/99 (62%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLL-NTLCDREANILRLHYGLNGEIPQS 203
QG M+LQ II GP+ T PE VK+Q+MKQ++E +L N LCDREA IL+LH+GLNG+ PQS
Sbjct: 322 QGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILHNVLCDREAKILKLHFGLNGDNPQS 381
Query: 202 FEDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYL 86
FE+IGR+LKLSRER+RQIN A+ KL+++ M+DN K+Y+
Sbjct: 382 FEEIGRVLKLSRERIRQINCTALSKLRESSMLDNFKMYI 420
>ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
gi|561022159|gb|ESW20889.1| hypothetical protein
PHAVU_005G023100g [Phaseolus vulgaris]
Length = 367
Score = 129 bits (324), Expect = 8e-28
Identities = 63/98 (64%), Positives = 80/98 (81%)
Frame = -1
Query: 376 GCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSFE 197
G MTLQEIIPGP+ PE MVK+QLMKQEV LLNTL REA I+ L+YGLNGE P +F+
Sbjct: 270 GHMTLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFK 329
Query: 196 DIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
+IG +++LSRER+RQIN +A+ KL+QT ++DNLK YL+
Sbjct: 330 EIGGMMQLSRERIRQINGIALSKLRQTSIIDNLKFYLV 367
>ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
gi|561022157|gb|ESW20887.1| hypothetical protein
PHAVU_005G023100g [Phaseolus vulgaris]
Length = 366
Score = 129 bits (324), Expect = 8e-28
Identities = 63/98 (64%), Positives = 80/98 (81%)
Frame = -1
Query: 376 GCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSFE 197
G MTLQEIIPGP+ PE MVK+QLMKQEV LLNTL REA I+ L+YGLNGE P +F+
Sbjct: 269 GHMTLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFK 328
Query: 196 DIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
+IG +++LSRER+RQIN +A+ KL+QT ++DNLK YL+
Sbjct: 329 EIGGMMQLSRERIRQINGIALSKLRQTSIIDNLKFYLV 366
>ref|XP_007148892.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
gi|561022156|gb|ESW20886.1| hypothetical protein
PHAVU_005G023100g [Phaseolus vulgaris]
Length = 296
Score = 129 bits (324), Expect = 8e-28
Identities = 63/98 (64%), Positives = 80/98 (81%)
Frame = -1
Query: 376 GCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSFE 197
G MTLQEIIPGP+ PE MVK+QLMKQEV LLNTL REA I+ L+YGLNGE P +F+
Sbjct: 199 GHMTLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFK 258
Query: 196 DIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
+IG +++LSRER+RQIN +A+ KL+QT ++DNLK YL+
Sbjct: 259 EIGGMMQLSRERIRQINGIALSKLRQTSIIDNLKFYLV 296
>emb|CDP17818.1| unnamed protein product [Coffea canephora]
Length = 445
Score = 129 bits (323), Expect = 1e-27
Identities = 62/96 (64%), Positives = 78/96 (81%)
Frame = -1
Query: 370 MTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSFEDI 191
M+LQEI+ GPD T PE +VKKQ MK+++E LL LCDRE NILRL+YGLNG PQSFE+I
Sbjct: 348 MSLQEIVAGPDETTPEAIVKKQFMKRDIEKLLKGLCDREVNILRLYYGLNGNTPQSFEEI 407
Query: 190 GRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
GR L+LSRERVRQI+ A+ KL+QT MV++L Y++
Sbjct: 408 GRQLELSRERVRQISCTALTKLRQTSMVNDLITYIL 443
>ref|XP_012065613.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
X1 [Jatropha curcas] gi|643737466|gb|KDP43578.1|
hypothetical protein JCGZ_16865 [Jatropha curcas]
Length = 429
Score = 127 bits (318), Expect = 4e-27
Identities = 61/99 (61%), Positives = 81/99 (81%)
Frame = -1
Query: 379 QGCMTLQEIIPGPDATRPETMVKKQLMKQEVENLLNTLCDREANILRLHYGLNGEIPQSF 200
QG MTLQEI+PGPD PE MVK+QL+KQE++ LL TL +REA +LRL +GLNG+ PQSF
Sbjct: 331 QGGMTLQEILPGPDEMMPEYMVKRQLLKQELDKLLQTLSEREAYVLRLTFGLNGQTPQSF 390
Query: 199 EDIGRLLKLSRERVRQINHVAMLKLQQTGMVDNLKVYLM 83
E+IG LKL RERVRQIN +A+ KL++ +++NL+VY++
Sbjct: 391 EEIGGSLKLCRERVRQINSIALSKLRERSILENLEVYIV 429