BLASTX nr result

ID: Cornus23_contig00026224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00026224
         (467 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010327221.1| PREDICTED: chloride channel protein CLC-f-li...    65   2e-08
ref|XP_006352569.1| PREDICTED: chloride channel protein CLC-f-li...    65   2e-08
ref|XP_004248298.1| PREDICTED: chloride channel protein CLC-f-li...    65   2e-08
ref|XP_009769742.1| PREDICTED: chloride channel protein CLC-f-li...    62   2e-07
ref|XP_009769741.1| PREDICTED: chloride channel protein CLC-f-li...    62   2e-07
ref|XP_009617325.1| PREDICTED: chloride channel protein CLC-f-li...    60   5e-07
ref|XP_006346072.1| PREDICTED: chloride channel protein CLC-f-li...    58   2e-06
emb|CAC36398.1| hypothetical protein [Solanum lycopersicum]            58   2e-06
ref|NP_001234185.2| uncharacterized protein LOC606305 [Solanum l...    58   2e-06

>ref|XP_010327221.1| PREDICTED: chloride channel protein CLC-f-like isoform X1 [Solanum
           lycopersicum]
          Length = 787

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = -3

Query: 195 MSGGEYSEXXXXXXXXXSASDGDLESQGSPKS-NIGFQDLLKRLDRGFSGRRV-SFKRSE 22
           MSGGEYS+         SASDGDLE Q   ++ N G  DLLKRLDRGFS RR+ S KRS+
Sbjct: 1   MSGGEYSDRNVLLRSSSSASDGDLEGQFPHRTGNKGITDLLKRLDRGFSNRRLSSVKRSD 60

Query: 21  RDNPSSS 1
           RD  SSS
Sbjct: 61  RDQSSSS 67


>ref|XP_006352569.1| PREDICTED: chloride channel protein CLC-f-like [Solanum tuberosum]
          Length = 758

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 40/69 (57%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
 Frame = -3

Query: 201 VEMSGGEYSEXXXXXXXXXSASDGDLESQGSPKS-NIGFQDLLKRLDRGFSGRRV-SFKR 28
           +EMSGGEYS+         SASDGDLE Q   ++ N    DLLKRLDRGFS RR+ S KR
Sbjct: 1   MEMSGGEYSDRNVLLRSNSSASDGDLEGQFPHRTGNKSITDLLKRLDRGFSNRRLSSVKR 60

Query: 27  SERDNPSSS 1
           S+RD  SSS
Sbjct: 61  SDRDQSSSS 69


>ref|XP_004248298.1| PREDICTED: chloride channel protein CLC-f-like isoform X2 [Solanum
           lycopersicum]
          Length = 756

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = -3

Query: 195 MSGGEYSEXXXXXXXXXSASDGDLESQGSPKS-NIGFQDLLKRLDRGFSGRRV-SFKRSE 22
           MSGGEYS+         SASDGDLE Q   ++ N G  DLLKRLDRGFS RR+ S KRS+
Sbjct: 1   MSGGEYSDRNVLLRSSSSASDGDLEGQFPHRTGNKGITDLLKRLDRGFSNRRLSSVKRSD 60

Query: 21  RDNPSSS 1
           RD  SSS
Sbjct: 61  RDQSSSS 67


>ref|XP_009769742.1| PREDICTED: chloride channel protein CLC-f-like isoform X2
           [Nicotiana sylvestris]
          Length = 684

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = -3

Query: 195 MSGGEYSEXXXXXXXXXSASDGDLESQGSPKSNI-GFQDLLKRLDRGFSGRR-VSFKRSE 22
           MSGGEY +         SAS+GDLESQ   ++N   F+DLLKRLDRGFSGRR    KRS+
Sbjct: 1   MSGGEY-DHNVLLRSTSSASEGDLESQSPRRTNTRSFKDLLKRLDRGFSGRRSCDIKRSD 59

Query: 21  RDNPSSS 1
           RD  SSS
Sbjct: 60  RDQNSSS 66


>ref|XP_009769741.1| PREDICTED: chloride channel protein CLC-f-like isoform X1
           [Nicotiana sylvestris]
          Length = 749

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = -3

Query: 195 MSGGEYSEXXXXXXXXXSASDGDLESQGSPKSNI-GFQDLLKRLDRGFSGRR-VSFKRSE 22
           MSGGEY +         SAS+GDLESQ   ++N   F+DLLKRLDRGFSGRR    KRS+
Sbjct: 1   MSGGEY-DHNVLLRSTSSASEGDLESQSPRRTNTRSFKDLLKRLDRGFSGRRSCDIKRSD 59

Query: 21  RDNPSSS 1
           RD  SSS
Sbjct: 60  RDQNSSS 66


>ref|XP_009617325.1| PREDICTED: chloride channel protein CLC-f-like [Nicotiana
           tomentosiformis]
          Length = 745

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
 Frame = -3

Query: 195 MSGGEYSEXXXXXXXXXSASDGDLESQGSPKSNI-GFQDLLKRLDRGFSGRRVSFKRSER 19
           M+GGEYS+         SAS+GDLESQ   ++N    +DLLKRLDRGFSGR     RSER
Sbjct: 1   MTGGEYSDHNVLLRSTSSASEGDLESQSPRRTNTRSIKDLLKRLDRGFSGR-----RSER 55

Query: 18  DNPSSS 1
           D  SSS
Sbjct: 56  DQNSSS 61


>ref|XP_006346072.1| PREDICTED: chloride channel protein CLC-f-like [Solanum tuberosum]
          Length = 752

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = -3

Query: 195 MSGGEYSEXXXXXXXXXSASDGDLESQGSPK--SNIGFQDLLKRLDRGFSGRRVSFKRSE 22
           MSGGEY +         SAS+GD+ESQ SP+  +    +DLLKRLDRGFSGRR     S+
Sbjct: 1   MSGGEYGDHNILLRSTSSASEGDVESQSSPRRTNTRSIKDLLKRLDRGFSGRR----SSD 56

Query: 21  RDNPSSS 1
           RD+  SS
Sbjct: 57  RDHHHSS 63


>emb|CAC36398.1| hypothetical protein [Solanum lycopersicum]
          Length = 750

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = -3

Query: 195 MSGGEYSEXXXXXXXXXSASDGDLESQGSPK--SNIGFQDLLKRLDRGFSGRRVSFKRSE 22
           MSGGEY +         SAS+GD+ESQ SP+  +    +DLLKRLDRGFSGRR     S+
Sbjct: 1   MSGGEYGDHNILLRSTSSASEGDVESQSSPRRTNTRSIKDLLKRLDRGFSGRR----SSD 56

Query: 21  RDNPSSS 1
           RD+  SS
Sbjct: 57  RDHHHSS 63


>ref|NP_001234185.2| uncharacterized protein LOC606305 [Solanum lycopersicum]
           gi|723717663|ref|XP_010324192.1| PREDICTED:
           uncharacterized protein LOC606305 isoform X1 [Solanum
           lycopersicum] gi|13620228|emb|CAC36403.1| hypothetical
           protein [Solanum lycopersicum]
          Length = 750

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = -3

Query: 195 MSGGEYSEXXXXXXXXXSASDGDLESQGSPK--SNIGFQDLLKRLDRGFSGRRVSFKRSE 22
           MSGGEY +         SAS+GD+ESQ SP+  +    +DLLKRLDRGFSGRR     S+
Sbjct: 1   MSGGEYGDHNILLRSTSSASEGDVESQSSPRRTNTRSIKDLLKRLDRGFSGRR----SSD 56

Query: 21  RDNPSSS 1
           RD+  SS
Sbjct: 57  RDHHHSS 63


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