BLASTX nr result

ID: Cornus23_contig00026199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00026199
         (397 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP18290.1| unnamed protein product [Coffea canephora]             59   2e-06
emb|CBI20803.3| unnamed protein product [Vitis vinifera]               57   7e-06
ref|XP_002283217.1| PREDICTED: uncharacterized protein LOC100255...    57   7e-06
ref|XP_014502735.1| PREDICTED: uncharacterized protein LOC106763...    56   9e-06
gb|KOM48409.1| hypothetical protein LR48_Vigan07g211300 [Vigna a...    56   9e-06
ref|XP_007011511.1| ATP-dependent rRNA helicase SPB4, putative [...    56   9e-06
ref|XP_003588618.1| Myb/SANT-like DNA-binding domain protein [Me...    56   9e-06

>emb|CDP18290.1| unnamed protein product [Coffea canephora]
          Length = 289

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = -1

Query: 397 LKNIETSQTDFTRCQGDKLIACLGNLSDTLDRFCDLVQEC 278
           LKN E  QTD TR QGDK+I CLGN+  TL++FC LVQEC
Sbjct: 243 LKNNEAMQTDSTRRQGDKIIDCLGNIVSTLNQFCHLVQEC 282


>emb|CBI20803.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -1

Query: 394 KNIETSQTDFTRCQGDKLIACLGNLSDTLDRFCDLVQECG 275
           KN ET Q DF R QGDKLIACL +++DTLD+  D+VQ+CG
Sbjct: 211 KNRETLQADFKRRQGDKLIACLRDIADTLDQLRDIVQKCG 250


>ref|XP_002283217.1| PREDICTED: uncharacterized protein LOC100255883 [Vitis vinifera]
           gi|359476329|ref|XP_003631820.1| PREDICTED:
           uncharacterized protein LOC100255883 [Vitis vinifera]
          Length = 274

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -1

Query: 394 KNIETSQTDFTRCQGDKLIACLGNLSDTLDRFCDLVQECG 275
           KN ET Q DF R QGDKLIACL +++DTLD+  D+VQ+CG
Sbjct: 235 KNRETLQADFKRRQGDKLIACLRDIADTLDQLRDIVQKCG 274


>ref|XP_014502735.1| PREDICTED: uncharacterized protein LOC106763077 [Vigna radiata var.
           radiata]
          Length = 314

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -1

Query: 394 KNIETSQTDFTRCQGDKLIACLGNLSDTLDRFCDLVQEC 278
           KN+E S TDFTR QGDKLI  LG+ S+TL + CD++QEC
Sbjct: 275 KNVEDSCTDFTRRQGDKLITSLGDFSNTLKQLCDILQEC 313


>gb|KOM48409.1| hypothetical protein LR48_Vigan07g211300 [Vigna angularis]
          Length = 311

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -1

Query: 394 KNIETSQTDFTRCQGDKLIACLGNLSDTLDRFCDLVQEC 278
           KN+E S TDFTR QGDKLI  LG+ S+TL + CD++QEC
Sbjct: 272 KNVEDSCTDFTRRQGDKLITSLGDFSNTLKQLCDILQEC 310


>ref|XP_007011511.1| ATP-dependent rRNA helicase SPB4, putative [Theobroma cacao]
           gi|508781874|gb|EOY29130.1| ATP-dependent rRNA helicase
           SPB4, putative [Theobroma cacao]
          Length = 92

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 24/40 (60%), Positives = 33/40 (82%)
 Frame = -1

Query: 397 LKNIETSQTDFTRCQGDKLIACLGNLSDTLDRFCDLVQEC 278
           +KN+E  +TDF R QGDKL+ACLG++  TL++F +LVQEC
Sbjct: 52  VKNVEEFRTDFIRRQGDKLVACLGDILSTLNQFSELVQEC 91


>ref|XP_003588618.1| Myb/SANT-like DNA-binding domain protein [Medicago truncatula]
           gi|355477666|gb|AES58869.1| Myb/SANT-like DNA-binding
           domain protein [Medicago truncatula]
          Length = 319

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -1

Query: 394 KNIETSQTDFTRCQGDKLIACLGNLSDTLDRFCDLVQEC 278
           +NIE  +T+FTR QGDKLIA LGN S+TL + CDL+QEC
Sbjct: 280 ENIEDYRTEFTRRQGDKLIARLGNFSNTLKQLCDLLQEC 318


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