BLASTX nr result
ID: Cornus23_contig00026035
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00026035
(530 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010245113.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 104 2e-20
ref|XP_010031521.1| PREDICTED: DNA polymerase epsilon subunit D ... 97 4e-18
ref|XP_002275482.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 97 6e-18
ref|XP_011043044.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 94 3e-17
ref|XP_009605311.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 94 3e-17
ref|XP_006362889.1| PREDICTED: DNA polymerase epsilon subunit 3-... 94 3e-17
ref|XP_004291600.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 94 3e-17
ref|XP_004251060.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 94 3e-17
ref|XP_002312821.1| CCAAT-box binding transcription factor subun... 94 3e-17
ref|XP_010089818.1| DNA polymerase epsilon subunit 3 [Morus nota... 94 4e-17
ref|XP_011088898.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 93 7e-17
ref|XP_012447729.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 92 1e-16
ref|XP_009411949.1| PREDICTED: DNA polymerase epsilon subunit 3-... 92 1e-16
ref|XP_006855071.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 92 1e-16
ref|XP_009781709.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 92 2e-16
ref|XP_012076258.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 92 2e-16
ref|XP_007015804.1| Nuclear factor Y [Theobroma cacao] gi|508786... 92 2e-16
gb|KHN38630.1| DNA polymerase epsilon subunit 3 [Glycine soja] 91 3e-16
ref|NP_001237961.1| uncharacterized protein LOC100306382 [Glycin... 91 3e-16
ref|XP_010557419.1| PREDICTED: DNA polymerase epsilon subunit 3 ... 91 3e-16
>ref|XP_010245113.1| PREDICTED: DNA polymerase epsilon subunit 3 [Nelumbo nucifera]
Length = 153
Score = 104 bits (260), Expect = 2e-20
Identities = 57/102 (55%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKN---XXXXXX 172
HYLSATANDIC+ESKRQTINADDVFKALEEIEFPEF GPL+ASL+ FR KN
Sbjct: 52 HYLSATANDICRESKRQTINADDVFKALEEIEFPEFIGPLQASLDVFRRKNAGKKAVTAK 111
Query: 173 XXXXXXXXXXXXXLPTENGGED-KQEDVDESNQDEDESPDND 295
+NG E+ K+ +E N+DED SPD +
Sbjct: 112 AKEANKKRKMEEAAAAQNGNEECKENGKEEDNEDEDGSPDKE 153
>ref|XP_010031521.1| PREDICTED: DNA polymerase epsilon subunit D [Eucalyptus grandis]
gi|629084495|gb|KCW50852.1| hypothetical protein
EUGRSUZ_J00499 [Eucalyptus grandis]
Length = 285
Score = 97.4 bits (241), Expect = 4e-18
Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HYLSATANDICKESKRQTINADDV KALEE+EFPEF GPL+ASL+EFR +N
Sbjct: 58 HYLSATANDICKESKRQTINADDVLKALEEMEFPEFMGPLRASLDEFRKQNAGKKERAKA 117
Query: 182 XXXXXXXXXXLPTENGGE-DKQEDVDESNQDEDES 283
P++ G+ +++++ SN E+ES
Sbjct: 118 KESMKKKMEGEPSQTKGDGEREQNGSTSNGTEEES 152
>ref|XP_002275482.1| PREDICTED: DNA polymerase epsilon subunit 3 [Vitis vinifera]
gi|296084907|emb|CBI28316.3| unnamed protein product
[Vitis vinifera]
Length = 193
Score = 96.7 bits (239), Expect = 6e-18
Identities = 52/95 (54%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HYLSATAND+CKES+RQTINADDV KA+EEIEFPEF PLKASL+EFR KN
Sbjct: 53 HYLSATANDLCKESRRQTINADDVLKAIEEIEFPEFVQPLKASLDEFRKKNAGKKAGAAK 112
Query: 182 XXXXXXXXXXLPTEN-GGEDKQEDVDESNQDEDES 283
N G + K + DE N+ ED+S
Sbjct: 113 SKEAKKRKEDSSLNNEGDKGKNDGGDEGNEVEDDS 147
>ref|XP_011043044.1| PREDICTED: DNA polymerase epsilon subunit 3 [Populus euphratica]
Length = 145
Score = 94.4 bits (233), Expect = 3e-17
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKN 154
HYLSATANDICKESKRQT+NADDVFKALE+IEFPEF GPLK SL EF+ KN
Sbjct: 55 HYLSATANDICKESKRQTMNADDVFKALEDIEFPEFVGPLKVSLSEFKRKN 105
>ref|XP_009605311.1| PREDICTED: DNA polymerase epsilon subunit 3 [Nicotiana
tomentosiformis]
Length = 200
Score = 94.4 bits (233), Expect = 3e-17
Identities = 53/92 (57%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HYLSATANDICKESKRQTINA+DVFKALEEIEFPEF PL+ASLE FR +N
Sbjct: 70 HYLSATANDICKESKRQTINAEDVFKALEEIEFPEFIEPLRASLEVFRQRNSKRKSGSSK 129
Query: 182 XXXXXXXXXXL-PTENG-GEDKQEDVDESNQD 271
P ENG G+ K++ D N+D
Sbjct: 130 STESNKKAKLKEPVENGKGKMKEQPSDTENED 161
>ref|XP_006362889.1| PREDICTED: DNA polymerase epsilon subunit 3-like [Solanum
tuberosum]
Length = 172
Score = 94.4 bits (233), Expect = 3e-17
Identities = 54/92 (58%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HYLSATANDICKESKRQTINA+DVFKALEEIEFPE PLKASLE FR KN
Sbjct: 65 HYLSATANDICKESKRQTINAEDVFKALEEIEFPELIEPLKASLEGFREKNSKRKSVSSK 124
Query: 182 XXXXXXXXXXL-PTENG-GEDKQEDVDESNQD 271
P ENG G+ K++ D N+D
Sbjct: 125 SPESNKKAKLKEPVENGKGKMKEQPSDNENED 156
>ref|XP_004291600.1| PREDICTED: DNA polymerase epsilon subunit 3 [Fragaria vesca subsp.
vesca]
Length = 160
Score = 94.4 bits (233), Expect = 3e-17
Identities = 54/98 (55%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HYLSATANDIC+ SKRQTINADDVFKALE+IEFPEF GPLKASLEE R KN
Sbjct: 53 HYLSATANDICRGSKRQTINADDVFKALEDIEFPEFVGPLKASLEELREKNAGKKAGTSK 112
Query: 182 XXXXXXXXXXLPTENGGEDKQED----VDESNQDEDES 283
+ K E+ +E NQDED S
Sbjct: 113 AKEAKTKEAKTKEAKKKKRKLEEPPPKQEEENQDEDGS 150
>ref|XP_004251060.1| PREDICTED: DNA polymerase epsilon subunit 3 [Solanum lycopersicum]
Length = 175
Score = 94.4 bits (233), Expect = 3e-17
Identities = 54/92 (58%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HYLSATANDICKESKRQTINA+DVFKALEEIEFPE PLKASLE FR KN
Sbjct: 68 HYLSATANDICKESKRQTINAEDVFKALEEIEFPELIEPLKASLEGFREKNSKRKSTSSK 127
Query: 182 XXXXXXXXXXL-PTENG-GEDKQEDVDESNQD 271
P ENG G+ K++ D N+D
Sbjct: 128 SPESNKKAKLKEPVENGKGKMKEQPSDNENED 159
>ref|XP_002312821.1| CCAAT-box binding transcription factor subunit HAP3-related family
protein [Populus trichocarpa]
gi|118484583|gb|ABK94165.1| unknown [Populus
trichocarpa] gi|222849229|gb|EEE86776.1| CCAAT-box
binding transcription factor subunit HAP3-related family
protein [Populus trichocarpa]
Length = 145
Score = 94.4 bits (233), Expect = 3e-17
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKN 154
HYLSATANDICKESKRQT+NADDVFKALE+IEFPEF GPLK SL EF+ KN
Sbjct: 55 HYLSATANDICKESKRQTMNADDVFKALEDIEFPEFVGPLKVSLSEFKRKN 105
>ref|XP_010089818.1| DNA polymerase epsilon subunit 3 [Morus notabilis]
gi|587848146|gb|EXB38434.1| DNA polymerase epsilon
subunit 3 [Morus notabilis]
Length = 170
Score = 94.0 bits (232), Expect = 4e-17
Identities = 53/103 (51%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKN----XXXXX 169
HYLSATANDICKESKRQTIN DDVFKALEEIEF EF PL+ASL+EF+ +N
Sbjct: 52 HYLSATANDICKESKRQTINGDDVFKALEEIEFSEFLKPLQASLDEFKKRNAGKKKGASQ 111
Query: 170 XXXXXXXXXXXXXXLPTENGGEDKQEDVDESNQDE-DESPDND 295
++G E KQ++ DE +E DE DN+
Sbjct: 112 SEDVKKKRKLEDEPSDKKDGSESKQDENDEDKDNENDEDKDNE 154
>ref|XP_011088898.1| PREDICTED: DNA polymerase epsilon subunit 3 [Sesamum indicum]
Length = 157
Score = 93.2 bits (230), Expect = 7e-17
Identities = 52/98 (53%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HYLSATANDIC+ES RQ INA+DVFKALEEIEF EF GPL+A LEEFR KN
Sbjct: 60 HYLSATANDICRESNRQIINAEDVFKALEEIEFAEFIGPLRACLEEFRQKNPGRKVASSG 119
Query: 182 XXXXXXXXXXL----PTENGGEDKQEDVDESNQDEDES 283
P ++ G K+ +V ESN+DED++
Sbjct: 120 SSKAKDTSKNAKRKPPAQSEGRKKRREV-ESNRDEDDA 156
>ref|XP_012447729.1| PREDICTED: DNA polymerase epsilon subunit 3 [Gossypium raimondii]
gi|763788628|gb|KJB55624.1| hypothetical protein
B456_009G085200 [Gossypium raimondii]
Length = 167
Score = 92.4 bits (228), Expect = 1e-16
Identities = 54/108 (50%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKN--XXXXXXX 175
HYLSATANDICKESKRQT+NA+DVFKALEEIEF EF PL+ASL EFR KN
Sbjct: 52 HYLSATANDICKESKRQTMNAEDVFKALEEIEFSEFVKPLRASLAEFRKKNAGKKGGAAK 111
Query: 176 XXXXXXXXXXXXLPTENGGEDKQEDVD--------ESNQDEDESPDND 295
+NG + KQ+ D E Q++DE DN+
Sbjct: 112 ENEVKKKRKIEYSSAKNGTKTKQKKEDNHKEEEQVEGEQEQDEEEDNE 159
>ref|XP_009411949.1| PREDICTED: DNA polymerase epsilon subunit 3-like [Musa acuminata
subsp. malaccensis] gi|695048104|ref|XP_009411950.1|
PREDICTED: DNA polymerase epsilon subunit 3-like [Musa
acuminata subsp. malaccensis]
Length = 161
Score = 92.4 bits (228), Expect = 1e-16
Identities = 49/85 (57%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HY+SATANDICKESKRQTINADDV KALEEI+FPEF PLK +LE+FR KN
Sbjct: 77 HYVSATANDICKESKRQTINADDVLKALEEIDFPEFVEPLKVALEDFRTKNAVKKSGSKG 136
Query: 182 XXXXXXXXXXLPTENG--GEDKQED 250
L T+NG G D +D
Sbjct: 137 RQTKKRKVDELSTQNGEDGGDGSDD 161
>ref|XP_006855071.1| PREDICTED: DNA polymerase epsilon subunit 3 [Amborella trichopoda]
gi|548858800|gb|ERN16538.1| hypothetical protein
AMTR_s00031p00134850 [Amborella trichopoda]
Length = 162
Score = 92.4 bits (228), Expect = 1e-16
Identities = 52/109 (47%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HYLSATANDIC+ESKRQTINA+DVFKALEEI+FPEF PL+ SLE+FR K
Sbjct: 52 HYLSATANDICQESKRQTINAEDVFKALEEIDFPEFTEPLRVSLEDFRKKKAFKKSKETN 111
Query: 182 XXXXXXXXXXL----------PTENGGEDKQEDVDESNQD-EDESPDND 295
TE GG ++ED+DE +D DE +++
Sbjct: 112 KKRKSEEEPESNVIGSEGKGEETEEGGHTEKEDMDEQEEDCGDEGKEDE 160
>ref|XP_009781709.1| PREDICTED: DNA polymerase epsilon subunit 3 [Nicotiana sylvestris]
Length = 198
Score = 92.0 bits (227), Expect = 2e-16
Identities = 52/92 (56%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HYLSATANDICKESKRQTINA+DVFKALEEIEFPEF PL+ASLE FR +N
Sbjct: 68 HYLSATANDICKESKRQTINAEDVFKALEEIEFPEFIEPLRASLEVFRQRNSKRKSGSMK 127
Query: 182 XXXXXXXXXXL-PTENG-GEDKQEDVDESNQD 271
P ENG + K++ D N+D
Sbjct: 128 SAESNKKAKLKEPVENGKAKMKEQPSDTENED 159
>ref|XP_012076258.1| PREDICTED: DNA polymerase epsilon subunit 3 [Jatropha curcas]
gi|643725126|gb|KDP34290.1| hypothetical protein
JCGZ_12819 [Jatropha curcas]
Length = 151
Score = 92.0 bits (227), Expect = 2e-16
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKN 154
HYLSATANDICKES+RQTINADDV KALEEIEFPEF PLKASL+EF+ KN
Sbjct: 57 HYLSATANDICKESRRQTINADDVLKALEEIEFPEFVEPLKASLKEFKRKN 107
>ref|XP_007015804.1| Nuclear factor Y [Theobroma cacao] gi|508786167|gb|EOY33423.1|
Nuclear factor Y [Theobroma cacao]
Length = 161
Score = 91.7 bits (226), Expect = 2e-16
Identities = 52/107 (48%), Positives = 61/107 (57%), Gaps = 9/107 (8%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKN--------- 154
HYLSATANDICKES+RQTINA+DVFKALEEIEF EF PL+ASL EFR KN
Sbjct: 52 HYLSATANDICKESRRQTINAEDVFKALEEIEFSEFVKPLRASLAEFRRKNAGKKGGATK 111
Query: 155 XXXXXXXXXXXXXXXXXXXLPTENGGEDKQEDVDESNQDEDESPDND 295
+N GED E+ E ++E E +N+
Sbjct: 112 EKEVKKKRKVEEPSGKSGSKSKQNKGEDDNEEEREEGEEEAEEDENN 158
>gb|KHN38630.1| DNA polymerase epsilon subunit 3 [Glycine soja]
Length = 161
Score = 91.3 bits (225), Expect = 3e-16
Identities = 55/107 (51%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKN-----XXXX 166
HYLSATANDICKESKRQ IN +DVFKALEE EFPEF PLKASLEEFR KN
Sbjct: 48 HYLSATANDICKESKRQIINVEDVFKALEETEFPEFLRPLKASLEEFRKKNAGKKAAVSK 107
Query: 167 XXXXXXXXXXXXXXXLPTENGGEDKQ------EDVDESNQDEDESPD 289
P + G DK ED D+ D+ ES D
Sbjct: 108 GKDDEPRKKRKLEGESPDKGEGSDKAELSDKGEDPDKGESDKGESGD 154
>ref|NP_001237961.1| uncharacterized protein LOC100306382 [Glycine max]
gi|255628363|gb|ACU14526.1| unknown [Glycine max]
gi|947081631|gb|KRH30420.1| hypothetical protein
GLYMA_11G183100 [Glycine max]
Length = 161
Score = 91.3 bits (225), Expect = 3e-16
Identities = 55/107 (51%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKN-----XXXX 166
HYLSATANDICKESKRQ IN +DVFKALEE EFPEF PLKASLEEFR KN
Sbjct: 48 HYLSATANDICKESKRQIINVEDVFKALEETEFPEFLRPLKASLEEFRKKNAGKKAAVSK 107
Query: 167 XXXXXXXXXXXXXXXLPTENGGEDKQ------EDVDESNQDEDESPD 289
P + G DK ED D+ D+ ES D
Sbjct: 108 GKDDEPRKKRKLEGESPDKGEGSDKAELSDKGEDPDKGESDKGESGD 154
>ref|XP_010557419.1| PREDICTED: DNA polymerase epsilon subunit 3 [Tarenaya hassleriana]
Length = 172
Score = 90.9 bits (224), Expect = 3e-16
Identities = 51/108 (47%), Positives = 64/108 (59%), Gaps = 10/108 (9%)
Frame = +2
Query: 2 HYLSATANDICKESKRQTINADDVFKALEEIEFPEFAGPLKASLEEFRLKNXXXXXXXXX 181
HYLSATAND+CKESKRQT+NA+DV KALEEI+FPEF PLK SLEEF+ KN
Sbjct: 52 HYLSATANDLCKESKRQTMNANDVLKALEEIDFPEFVEPLKTSLEEFKQKNAGKKSGGGG 111
Query: 182 XXXXXXXXXXLPTENG----------GEDKQEDVDESNQDEDESPDND 295
E+ G++K+E+ D+ N DE+ + D D
Sbjct: 112 GSKPKETKKRKQEESSLQNGRRKSKPGKEKEEN-DDHNMDENGNEDGD 158