BLASTX nr result
ID: Cornus23_contig00025956
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00025956
(615 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007047756.1| RNA-binding KH domain-containing protein, pu... 100 5e-19
emb|CDP01585.1| unnamed protein product [Coffea canephora] 98 3e-18
ref|XP_007047753.1| Nucleic acid binding protein, putative isofo... 98 4e-18
gb|ADE75808.1| unknown [Picea sitchensis] 97 9e-18
gb|AFK39431.1| unknown [Lotus japonicus] 96 2e-17
ref|XP_010277538.1| PREDICTED: KH domain-containing protein At4g... 95 3e-17
ref|XP_003533422.1| PREDICTED: KH domain-containing protein At4g... 95 3e-17
ref|XP_014521434.1| PREDICTED: KH domain-containing protein At4g... 94 4e-17
gb|KOM26802.1| hypothetical protein LR48_Vigan319s000100 [Vigna ... 94 4e-17
ref|XP_007158350.1| hypothetical protein PHAVU_002G145300g [Phas... 94 4e-17
ref|XP_006852896.1| PREDICTED: KH domain-containing protein At4g... 94 8e-17
gb|KHN04910.1| KH domain-containing protein [Glycine soja] 93 1e-16
ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g... 93 1e-16
ref|XP_006353154.1| PREDICTED: KH domain-containing protein At4g... 92 2e-16
ref|XP_006845786.1| PREDICTED: KH domain-containing protein At4g... 92 2e-16
gb|KRH42079.1| hypothetical protein GLYMA_08G067400 [Glycine max] 92 3e-16
gb|KRH42078.1| hypothetical protein GLYMA_08G067400 [Glycine max] 92 3e-16
gb|KHN46253.1| KH domain-containing protein [Glycine soja] 92 3e-16
ref|XP_003532599.2| PREDICTED: KH domain-containing protein At4g... 92 3e-16
gb|KOM53938.1| hypothetical protein LR48_Vigan09g259700 [Vigna a... 91 4e-16
>ref|XP_007047756.1| RNA-binding KH domain-containing protein, putative isoform 4
[Theobroma cacao] gi|508700017|gb|EOX91913.1|
RNA-binding KH domain-containing protein, putative
isoform 4 [Theobroma cacao]
Length = 613
Score = 100 bits (250), Expect = 5e-19
Identities = 52/83 (62%), Positives = 62/83 (74%)
Frame = -3
Query: 613 GWIEHRSVKPAVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACE 434
G +E S K AVV N VE+V PE VF S+ G+ G NLA++K+ISGA+V V DPSPG E
Sbjct: 527 GGLELESKKSAVVKNTSVEIVVPEDVFGSIYGKHGCNLARLKEISGAKVEVHDPSPGESE 586
Query: 433 GKVIISGTPDQIMVAQSLLQAFI 365
G V ISGTPDQ ++AQSLLQAFI
Sbjct: 587 GIVFISGTPDQTLIAQSLLQAFI 609
>emb|CDP01585.1| unnamed protein product [Coffea canephora]
Length = 607
Score = 98.2 bits (243), Expect = 3e-18
Identities = 45/79 (56%), Positives = 65/79 (82%)
Frame = -3
Query: 598 RSVKPAVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVII 419
+S+ VT + +EV+ PE+ F S+ GE+GSNLA++K+ISGA + ++DP+PG C+GKVII
Sbjct: 528 QSLDAEAVTYKTIEVLVPEKDFGSVYGENGSNLARLKEISGATILLEDPAPGKCDGKVII 587
Query: 418 SGTPDQIMVAQSLLQAFIL 362
SGTP++I +AQSLLQAF+L
Sbjct: 588 SGTPERIQIAQSLLQAFML 606
>ref|XP_007047753.1| Nucleic acid binding protein, putative isoform 1 [Theobroma cacao]
gi|508700014|gb|EOX91910.1| Nucleic acid binding
protein, putative isoform 1 [Theobroma cacao]
Length = 706
Score = 97.8 bits (242), Expect = 4e-18
Identities = 50/77 (64%), Positives = 59/77 (76%)
Frame = -3
Query: 595 SVKPAVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIIS 416
S K AVV N VE+V PE VF S+ G+ G NLA++K+ISGA+V V DPSPG EG V IS
Sbjct: 626 SKKSAVVKNTSVEIVVPEDVFGSIYGKHGCNLARLKEISGAKVEVHDPSPGESEGIVFIS 685
Query: 415 GTPDQIMVAQSLLQAFI 365
GTPDQ ++AQSLLQAFI
Sbjct: 686 GTPDQTLIAQSLLQAFI 702
>gb|ADE75808.1| unknown [Picea sitchensis]
Length = 131
Score = 96.7 bits (239), Expect = 9e-18
Identities = 48/77 (62%), Positives = 60/77 (77%)
Frame = -3
Query: 583 AVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGTPD 404
AVVTN VEVV PE+V S+ GE+G+NL +++QISGA+V + DP PGA EG V+ISGTP+
Sbjct: 52 AVVTNTTVEVVVPERVIGSIYGENGNNLTQIRQISGAKVIIHDPRPGATEGLVVISGTPE 111
Query: 403 QIMVAQSLLQAFILPVQ 353
Q AQSLLQAFI+ Q
Sbjct: 112 QTHAAQSLLQAFIMSGQ 128
>gb|AFK39431.1| unknown [Lotus japonicus]
Length = 123
Score = 95.9 bits (237), Expect = 2e-17
Identities = 47/73 (64%), Positives = 56/73 (76%)
Frame = -3
Query: 583 AVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGTPD 404
A VTN VE+V E VF+S+ GEDG N+ +++QISGA VTV DPS G +GKV+ISGTPD
Sbjct: 45 ATVTNTTVEIVVSEHVFSSVYGEDGGNVDRIRQISGASVTVYDPSAGTSQGKVVISGTPD 104
Query: 403 QIMVAQSLLQAFI 365
Q AQSLLQAFI
Sbjct: 105 QTFAAQSLLQAFI 117
>ref|XP_010277538.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Nelumbo nucifera]
Length = 667
Score = 95.1 bits (235), Expect = 3e-17
Identities = 48/82 (58%), Positives = 59/82 (71%)
Frame = -3
Query: 598 RSVKPAVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVII 419
R K A+VTN VE++ PE V S+ GE GSNL +++QISGA+V V+DP PG + +II
Sbjct: 577 RGSKSAIVTNTTVEIMVPENVIRSVYGEQGSNLNRLRQISGAKVIVRDPHPGTTDTMIII 636
Query: 418 SGTPDQIMVAQSLLQAFILPVQ 353
SGTPDQ AQSLLQAFIL Q
Sbjct: 637 SGTPDQTQAAQSLLQAFILSGQ 658
>ref|XP_003533422.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max] gi|947090810|gb|KRH39475.1| hypothetical protein
GLYMA_09G200300 [Glycine max]
Length = 611
Score = 94.7 bits (234), Expect = 3e-17
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -3
Query: 583 AVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGTPD 404
A VTN VE++ E VF S+ GEDG NL +++QISGA VTV DPS G GKV+ISGTPD
Sbjct: 533 ATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGATVTVYDPSVGTSGGKVVISGTPD 592
Query: 403 QIMVAQSLLQAFI 365
Q + AQSLLQAFI
Sbjct: 593 QTLAAQSLLQAFI 605
>ref|XP_014521434.1| PREDICTED: KH domain-containing protein At4g18375 [Vigna radiata
var. radiata]
Length = 606
Score = 94.4 bits (233), Expect = 4e-17
Identities = 48/73 (65%), Positives = 54/73 (73%)
Frame = -3
Query: 583 AVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGTPD 404
A VTN VE+V E VF S+ GEDG NL +++QISGA VTV DPS G GKV+ISGTPD
Sbjct: 528 ATVTNTTVEIVVSEHVFGSVYGEDGGNLDRIRQISGATVTVYDPSVGTSGGKVVISGTPD 587
Query: 403 QIMVAQSLLQAFI 365
Q AQSLLQAFI
Sbjct: 588 QTFAAQSLLQAFI 600
>gb|KOM26802.1| hypothetical protein LR48_Vigan319s000100 [Vigna angularis]
Length = 605
Score = 94.4 bits (233), Expect = 4e-17
Identities = 48/73 (65%), Positives = 54/73 (73%)
Frame = -3
Query: 583 AVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGTPD 404
A VTN VE+V E VF S+ GEDG NL +++QISGA VTV DPS G GKV+ISGTPD
Sbjct: 527 ATVTNTTVEIVVSEHVFGSVYGEDGGNLDRIRQISGATVTVYDPSVGTSGGKVVISGTPD 586
Query: 403 QIMVAQSLLQAFI 365
Q AQSLLQAFI
Sbjct: 587 QTFAAQSLLQAFI 599
>ref|XP_007158350.1| hypothetical protein PHAVU_002G145300g [Phaseolus vulgaris]
gi|561031765|gb|ESW30344.1| hypothetical protein
PHAVU_002G145300g [Phaseolus vulgaris]
Length = 617
Score = 94.4 bits (233), Expect = 4e-17
Identities = 49/77 (63%), Positives = 55/77 (71%)
Frame = -3
Query: 583 AVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGTPD 404
A VTN VE+V E VF S+ GEDG NL +++QISGA VTV DPS G GKV+ISGTPD
Sbjct: 539 ATVTNTTVEIVVSEHVFGSVYGEDGGNLDRIRQISGATVTVFDPSGGTSGGKVVISGTPD 598
Query: 403 QIMVAQSLLQAFILPVQ 353
Q AQSLLQAFI Q
Sbjct: 599 QTFAAQSLLQAFIQTAQ 615
>ref|XP_006852896.1| PREDICTED: KH domain-containing protein At4g18375 [Amborella
trichopoda] gi|548856510|gb|ERN14363.1| hypothetical
protein AMTR_s00033p00221750 [Amborella trichopoda]
Length = 638
Score = 93.6 bits (231), Expect = 8e-17
Identities = 45/76 (59%), Positives = 57/76 (75%)
Frame = -3
Query: 589 KPAVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGT 410
K A+VTN +E+ PE + S+ GE+ +NL ++KQISGA+VTV DP PG +G VIISGT
Sbjct: 557 KSAIVTNTTIEIAVPEHLLGSVYGENRTNLNRIKQISGAKVTVYDPRPGTTQGTVIISGT 616
Query: 409 PDQIMVAQSLLQAFIL 362
PDQ AQSLLQA+IL
Sbjct: 617 PDQTQAAQSLLQAYIL 632
>gb|KHN04910.1| KH domain-containing protein [Glycine soja]
Length = 348
Score = 93.2 bits (230), Expect = 1e-16
Identities = 47/73 (64%), Positives = 54/73 (73%)
Frame = -3
Query: 583 AVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGTPD 404
A VTN VE++ E VF S+ GEDG NL +++QISGA VTV DPS G GKV+ISGTPD
Sbjct: 270 ATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGAIVTVYDPSVGTSGGKVVISGTPD 329
Query: 403 QIMVAQSLLQAFI 365
Q AQSLLQAFI
Sbjct: 330 QTFAAQSLLQAFI 342
>ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max] gi|947126609|gb|KRH74463.1| hypothetical protein
GLYMA_01G021400 [Glycine max]
Length = 602
Score = 93.2 bits (230), Expect = 1e-16
Identities = 47/73 (64%), Positives = 54/73 (73%)
Frame = -3
Query: 583 AVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGTPD 404
A VTN VE++ E VF S+ GEDG NL +++QISGA VTV DPS G GKV+ISGTPD
Sbjct: 524 ATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGAIVTVYDPSVGTSGGKVVISGTPD 583
Query: 403 QIMVAQSLLQAFI 365
Q AQSLLQAFI
Sbjct: 584 QTFAAQSLLQAFI 596
>ref|XP_006353154.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
tuberosum]
Length = 613
Score = 92.0 bits (227), Expect = 2e-16
Identities = 44/66 (66%), Positives = 54/66 (81%)
Frame = -3
Query: 562 VEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGTPDQIMVAQS 383
V + P+Q F S+ GEDGSNL ++K+ISGA V +QDP PG C+GKVIISGTP+QI +AQS
Sbjct: 546 VVINVPKQKFGSVYGEDGSNLTRLKEISGATVILQDPGPGECDGKVIISGTPEQIQMAQS 605
Query: 382 LLQAFI 365
LLQAFI
Sbjct: 606 LLQAFI 611
>ref|XP_006845786.1| PREDICTED: KH domain-containing protein At4g18375 [Amborella
trichopoda] gi|548848358|gb|ERN07461.1| hypothetical
protein AMTR_s00019p00253900 [Amborella trichopoda]
Length = 693
Score = 92.0 bits (227), Expect = 2e-16
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = -3
Query: 583 AVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGTPD 404
AVVT+ VEVV P+ + S+ GE+GSNL +++QISGA+V + DP PGA EG V+ISGTPD
Sbjct: 614 AVVTSTTVEVVVPQYLMGSIFGENGSNLNQIRQISGAKVNMHDPRPGALEGLVVISGTPD 673
Query: 403 QIMVAQSLLQAFILPVQ 353
Q AQSLL AFIL Q
Sbjct: 674 QTHAAQSLLHAFILSGQ 690
>gb|KRH42079.1| hypothetical protein GLYMA_08G067400 [Glycine max]
Length = 442
Score = 91.7 bits (226), Expect = 3e-16
Identities = 44/76 (57%), Positives = 58/76 (76%)
Frame = -3
Query: 589 KPAVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGT 410
K A+VTN V++V P+ V S+ GE+GSNLA+++QISGA+V V +P PG + +IISGT
Sbjct: 363 KTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGT 422
Query: 409 PDQIMVAQSLLQAFIL 362
PD+ AQSLLQAFIL
Sbjct: 423 PDETRAAQSLLQAFIL 438
>gb|KRH42078.1| hypothetical protein GLYMA_08G067400 [Glycine max]
Length = 425
Score = 91.7 bits (226), Expect = 3e-16
Identities = 44/76 (57%), Positives = 58/76 (76%)
Frame = -3
Query: 589 KPAVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGT 410
K A+VTN V++V P+ V S+ GE+GSNLA+++QISGA+V V +P PG + +IISGT
Sbjct: 346 KTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGT 405
Query: 409 PDQIMVAQSLLQAFIL 362
PD+ AQSLLQAFIL
Sbjct: 406 PDETRAAQSLLQAFIL 421
>gb|KHN46253.1| KH domain-containing protein [Glycine soja]
Length = 448
Score = 91.7 bits (226), Expect = 3e-16
Identities = 44/76 (57%), Positives = 58/76 (76%)
Frame = -3
Query: 589 KPAVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGT 410
K A+VTN V++V P+ V S+ GE+GSNLA+++QISGA+V V +P PG + +IISGT
Sbjct: 369 KTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGT 428
Query: 409 PDQIMVAQSLLQAFIL 362
PD+ AQSLLQAFIL
Sbjct: 429 PDETRAAQSLLQAFIL 444
>ref|XP_003532599.2| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Glycine max] gi|947093492|gb|KRH42077.1| hypothetical
protein GLYMA_08G067400 [Glycine max]
Length = 587
Score = 91.7 bits (226), Expect = 3e-16
Identities = 44/76 (57%), Positives = 58/76 (76%)
Frame = -3
Query: 589 KPAVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGT 410
K A+VTN V++V P+ V S+ GE+GSNLA+++QISGA+V V +P PG + +IISGT
Sbjct: 508 KTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGT 567
Query: 409 PDQIMVAQSLLQAFIL 362
PD+ AQSLLQAFIL
Sbjct: 568 PDETRAAQSLLQAFIL 583
>gb|KOM53938.1| hypothetical protein LR48_Vigan09g259700 [Vigna angularis]
Length = 669
Score = 91.3 bits (225), Expect = 4e-16
Identities = 43/76 (56%), Positives = 60/76 (78%)
Frame = -3
Query: 589 KPAVVTNRIVEVVFPEQVFNSMCGEDGSNLAKVKQISGAEVTVQDPSPGACEGKVIISGT 410
KPA+VTN VE+V P++ +S+ GE+GSNLA+++QISGA+V V +P PG + +IISG+
Sbjct: 590 KPAIVTNTTVEIVVPDETIDSVYGENGSNLARLRQISGAKVVVHEPRPGTRDRIIIISGS 649
Query: 409 PDQIMVAQSLLQAFIL 362
PD+ AQSLL+AFIL
Sbjct: 650 PDETKAAQSLLRAFIL 665