BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00025940
         (812 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH06983.2| 194 kDa protein [Grapevine virus A]                     60   2e-06

>gb|ABH06983.2| 194 kDa protein [Grapevine virus A]
          Length = 1707

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
 Frame = -2

Query: 478  AKEDREEPGRGGATDQFKETAF----VNPHDHKR-------KDTATYFLSVQKRLKTMSA 332
            AKEDRE+    G T+Q  E  +     NP  HK         DTAT+ +SV+KRL+  + 
Sbjct: 1262 AKEDREQYTEAGRTEQIDEEGYKGEDANPMTHKALYLRHTSDDTATFMMSVKKRLRFRNF 1321

Query: 331  KANARRMARCK--RTDMCDEFDKLVPVPPRWSAMKHAEYCDLAVSEYEANRTKEAVHAKL 158
            +AN R+   C      M   F ++  +     ++   E C++   +    ++   +    
Sbjct: 1322 EANRRKYKACHGIGQQMFSVFKEIYQL-KEIDSLPELERCEMEFMKKRVEKSAVLIEQHA 1380

Query: 157  DAHDPDRTGSDIKISLKNQVIKKDEKRKQKMAIAGQLI 44
               DPD   + +KI LK Q   K EKR    A AGQ I
Sbjct: 1381 GRSDPDWPSNYLKIFLKQQTCTKMEKRGVD-AKAGQTI 1417