BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00025667
         (289 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part...   100   7e-19
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr...    99   9e-19
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci...    99   2e-18
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr...    98   3e-18
ref|XP_012457454.1| PREDICTED: DNA repair protein XRCC4 [Gossypi...    97   4e-18
ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform ...    97   4e-18
ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform ...    97   4e-18
ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1...    97   4e-18
gb|KDO45905.1| hypothetical protein CISIN_1g047048mg [Citrus sin...    94   4e-17
gb|KHG07154.1| DNA repair XRCC4 -like protein [Gossypium arboreum]     94   5e-17
ref|XP_010650008.1| PREDICTED: DNA repair protein XRCC4 isoform ...    93   7e-17
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 isoform ...    93   9e-17
emb|CBI26376.3| unnamed protein product [Vitis vinifera]               93   9e-17
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...    91   3e-16
ref|XP_003556366.1| PREDICTED: DNA repair protein XRCC4-like [Gl...    86   1e-14
ref|XP_010278106.1| PREDICTED: DNA repair protein XRCC4 [Nelumbo...    85   2e-14
ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4 isoform ...    84   3e-14
ref|XP_003536230.1| PREDICTED: DNA repair protein XRCC4-like [Gl...    84   3e-14
gb|ACU23936.1| unknown [Glycine max]                                   84   3e-14
ref|XP_006378354.1| hypothetical protein POPTR_0010s08650g [Popu...    84   5e-14

>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
           gi|557522045|gb|ESR33412.1| hypothetical protein
           CICLE_v10007171mg, partial [Citrus clementina]
          Length = 243

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 53/80 (66%), Positives = 64/80 (80%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKK+KL++LR++LSKQ   G   +EE+Q STD+TESF  GSDDD SEEEP K++
Sbjct: 164 FLGVLNSKKSKLRELRDKLSKQAVMGDLQQEEEQ-STDKTESFDEGSDDDKSEEEPAKDI 222

Query: 107 TSTSKDVRASKPCGRKRILR 48
           TSTSK V AS+  GRKRI R
Sbjct: 223 TSTSKGVPASRARGRKRISR 242


>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
           gi|557522040|gb|ESR33407.1| hypothetical protein
           CICLE_v10005689mg [Citrus clementina]
          Length = 256

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKK+KL++LR++LSKQ   G   ++E++ESTD+TESF GGSDDD SEE+P K++
Sbjct: 177 FLGVLNSKKSKLRELRDKLSKQAVMG-DLQQEEEESTDKTESFDGGSDDDKSEEQPTKDI 235

Query: 107 TSTSKDVRASKPCGRKRILR 48
           TSTS  V AS+  GRKRI R
Sbjct: 236 TSTSIGVPASRARGRKRISR 255


>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
          Length = 256

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 53/80 (66%), Positives = 63/80 (78%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKK+KL++LR++LSKQ   G   +EE+Q STD+TESF  GSDDD SEEEP K +
Sbjct: 177 FLGVLNSKKSKLRELRDKLSKQAVMGDLQQEEEQ-STDKTESFDEGSDDDKSEEEPAKAI 235

Query: 107 TSTSKDVRASKPCGRKRILR 48
           TSTSK V AS+  GRKRI R
Sbjct: 236 TSTSKGVPASRARGRKRISR 255


>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
           gi|557522035|gb|ESR33402.1| hypothetical protein
           CICLE_v10005690mg [Citrus clementina]
          Length = 256

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKK+KL++LR++LSKQ   G   +EE  +STD+TESF  GSDDD SEEEP K++
Sbjct: 178 FLGVLNSKKSKLRELRDKLSKQAVMGDLQQEE--QSTDKTESFDEGSDDDKSEEEPAKDI 235

Query: 107 TSTSKDVRASKPCGRKRILR 48
           TSTSK V AS+  GRKRI R
Sbjct: 236 TSTSKGVPASRARGRKRISR 255


>ref|XP_012457454.1| PREDICTED: DNA repair protein XRCC4 [Gossypium raimondii]
           gi|763805397|gb|KJB72335.1| hypothetical protein
           B456_011G171700 [Gossypium raimondii]
          Length = 261

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 49/80 (61%), Positives = 66/80 (82%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKKAKL++LR+QLSKQ+ +GK++ +E +ESTD+TES+  GS+ + SEEE EKN+
Sbjct: 182 FLGVLNSKKAKLRELRDQLSKQEIAGKASVDE-EESTDKTESYHSGSNAEESEEEAEKNI 240

Query: 107 TSTSKDVRASKPCGRKRILR 48
           TS+SKD+ A +  GRKR  R
Sbjct: 241 TSSSKDIPAGRDRGRKRATR 260


>ref|XP_007035006.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
           gi|508714035|gb|EOY05932.1| DNA ligase iv-binding
           protein XRCC4 isoform 3 [Theobroma cacao]
          Length = 277

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 51/77 (66%), Positives = 63/77 (81%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKKAKL++LR+QLSKQ+T+GK+  EE ++STD+TES+  GSD +  EEEPEKNL
Sbjct: 196 FLGVLNSKKAKLRELRDQLSKQETTGKALMEE-EDSTDKTESYHTGSDAEGGEEEPEKNL 254

Query: 107 TSTSKDVRASKPCGRKR 57
           TST KDV A+   GR R
Sbjct: 255 TSTCKDVPAAAGRGRGR 271


>ref|XP_007035005.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
           gi|508714034|gb|EOY05931.1| DNA ligase iv-binding
           protein XRCC4 isoform 2 [Theobroma cacao]
          Length = 276

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 51/77 (66%), Positives = 63/77 (81%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKKAKL++LR+QLSKQ+T+GK+  EE ++STD+TES+  GSD +  EEEPEKNL
Sbjct: 195 FLGVLNSKKAKLRELRDQLSKQETTGKALMEE-EDSTDKTESYHTGSDAEGGEEEPEKNL 253

Query: 107 TSTSKDVRASKPCGRKR 57
           TST KDV A+   GR R
Sbjct: 254 TSTCKDVPAAAGRGRGR 270


>ref|XP_007035004.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
           gi|508714033|gb|EOY05930.1| DNA repair protein XRCC4,
           putative isoform 1 [Theobroma cacao]
          Length = 263

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 51/77 (66%), Positives = 63/77 (81%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKKAKL++LR+QLSKQ+T+GK+  EE ++STD+TES+  GSD +  EEEPEKNL
Sbjct: 182 FLGVLNSKKAKLRELRDQLSKQETTGKALMEE-EDSTDKTESYHTGSDAEGGEEEPEKNL 240

Query: 107 TSTSKDVRASKPCGRKR 57
           TST KDV A+   GR R
Sbjct: 241 TSTCKDVPAAAGRGRGR 257


>gb|KDO45905.1| hypothetical protein CISIN_1g047048mg [Citrus sinensis]
          Length = 240

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 49/80 (61%), Positives = 63/80 (78%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKK+KL++L+++LSKQ   G   ++E++ESTD TESF  G+DDD SEEEP K++
Sbjct: 161 FLGVLNSKKSKLRELQDKLSKQAVMG-DLQQEEEESTDETESFDEGTDDDKSEEEPAKDI 219

Query: 107 TSTSKDVRASKPCGRKRILR 48
           TSTS  V AS+  GRKRI R
Sbjct: 220 TSTSIGVPASRARGRKRISR 239


>gb|KHG07154.1| DNA repair XRCC4 -like protein [Gossypium arboreum]
          Length = 269

 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 47/80 (58%), Positives = 65/80 (81%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKKAKL++LR+QLSKQ+ +GK++ +E +ESTD+TES+  GS+ + SEEE +K +
Sbjct: 190 FLGVLNSKKAKLRELRDQLSKQEIAGKASVDE-EESTDKTESYHSGSNAEESEEEADKKI 248

Query: 107 TSTSKDVRASKPCGRKRILR 48
           TS+SKD+ A +  GRKR  R
Sbjct: 249 TSSSKDIPAGRGRGRKRATR 268


>ref|XP_010650008.1| PREDICTED: DNA repair protein XRCC4 isoform X2 [Vitis vinifera]
          Length = 259

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 49/81 (60%), Positives = 62/81 (76%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKKAKL++LR+Q+SK++T+GK  +EE  ESTD+T SF   SD++  EEE  KNL
Sbjct: 179 FLGVLNSKKAKLRELRDQISKEETTGKLPQEE-DESTDKTLSFDDESDNEAIEEESSKNL 237

Query: 107 TSTSKDVRASKPCGRKRILRS 45
           T TSK V  S+P GRKR+  S
Sbjct: 238 TGTSKHVSTSRPRGRKRVAPS 258


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 isoform X1 [Vitis vinifera]
          Length = 259

 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 48/78 (61%), Positives = 61/78 (78%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKKAKL++LR+Q+SK++T+GK  +EE  ESTD+T SF   SD++  EEE  KNL
Sbjct: 179 FLGVLNSKKAKLRELRDQISKEETTGKLPQEE-DESTDKTLSFDDESDNEAIEEESSKNL 237

Query: 107 TSTSKDVRASKPCGRKRI 54
           T TSK V  S+P GRKR+
Sbjct: 238 TGTSKHVSTSRPRGRKRV 255


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 48/78 (61%), Positives = 61/78 (78%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKKAKL++LR+Q+SK++T+GK  +EE  ESTD+T SF   SD++  EEE  KNL
Sbjct: 179 FLGVLNSKKAKLRELRDQISKEETTGKLPQEE-DESTDKTLSFDDESDNEAIEEESSKNL 237

Query: 107 TSTSKDVRASKPCGRKRI 54
           T TSK V  S+P GRKR+
Sbjct: 238 TGTSKHVSTSRPRGRKRV 255


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESF-SGGSDDDNSEEEPEKN 111
           FL VLNSKK KL+ LR+QLSK++ SGK  +EE++ESTD+TESF    SD D SEEEP + 
Sbjct: 184 FLAVLNSKKRKLRQLRDQLSKKEASGKLPQEEEEESTDKTESFEEDSSDGDKSEEEPPEK 243

Query: 110 LTSTSKDVRASKPCGRKRILR 48
           +T TS+D  +S+  GRKRI R
Sbjct: 244 VTGTSEDKPSSRGRGRKRITR 264


>ref|XP_003556366.1| PREDICTED: DNA repair protein XRCC4-like [Glycine max]
           gi|734352511|gb|KHN13148.1| DNA repair protein XRCC4
           [Glycine soja] gi|947042620|gb|KRG92344.1| hypothetical
           protein GLYMA_20G205600 [Glycine max]
          Length = 256

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 45/78 (57%), Positives = 61/78 (78%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKK+KL+ LR++LSKQ+ S KS EEE    TD+TESF   +D + S+E+P+K++
Sbjct: 179 FLGVLNSKKSKLRVLRDKLSKQENSEKSPEEE---DTDKTESFDEENDFERSDEDPQKDI 235

Query: 107 TSTSKDVRASKPCGRKRI 54
           TS+SK+V A+KP   KRI
Sbjct: 236 TSSSKEVMANKPSHPKRI 253


>ref|XP_010278106.1| PREDICTED: DNA repair protein XRCC4 [Nelumbo nucifera]
          Length = 258

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 44/77 (57%), Positives = 57/77 (74%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           F+ VLNSKKAKL++LR++LSKQ+ + KS +EE   STD+TES+   SD D S+E+  KNL
Sbjct: 183 FVSVLNSKKAKLRELRDRLSKQENTSKSPQEE-DGSTDKTESYDEESDADKSDEDQSKNL 241

Query: 107 TSTSKDVRASKPCGRKR 57
             TSK V +SKP  RKR
Sbjct: 242 AGTSKSVASSKPSSRKR 258


>ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4 isoform X1 [Cicer arietinum]
           gi|828303160|ref|XP_012569810.1| PREDICTED: DNA repair
           protein XRCC4 isoform X2 [Cicer arietinum]
          Length = 255

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 45/77 (58%), Positives = 58/77 (75%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKKAKL++LR+QLSKQ  + KS +E   E TD+TESF   SD+D S E+P+K +
Sbjct: 178 FLGVLNSKKAKLRELRDQLSKQDNADKSPQE---EDTDKTESFDEESDNDLSNEDPQKCI 234

Query: 107 TSTSKDVRASKPCGRKR 57
           TS+SK V A+KP   +R
Sbjct: 235 TSSSKKVGANKPSRSRR 251


>ref|XP_003536230.1| PREDICTED: DNA repair protein XRCC4-like [Glycine max]
           gi|947085733|gb|KRH34454.1| hypothetical protein
           GLYMA_10G184800 [Glycine max]
          Length = 256

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 44/80 (55%), Positives = 61/80 (76%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKK+KL++LR++L+K + + KS EEE    TD+TESF   SD D S+E+P+K++
Sbjct: 179 FLGVLNSKKSKLRELRDKLAKPENTEKSPEEE---DTDKTESFDEESDFDRSDEDPQKDI 235

Query: 107 TSTSKDVRASKPCGRKRILR 48
           +S+SKDV A+KP   KR  R
Sbjct: 236 SSSSKDVMANKPSCPKRTRR 255


>gb|ACU23936.1| unknown [Glycine max]
          Length = 256

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 44/80 (55%), Positives = 61/80 (76%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKK+KL++LR++L+K + + KS EEE    TD+TESF   SD D S+E+P+K++
Sbjct: 179 FLGVLNSKKSKLRELRDKLAKPENTEKSPEEE---DTDKTESFDEESDFDRSDEDPQKDI 235

Query: 107 TSTSKDVRASKPCGRKRILR 48
           +S+SKDV A+KP   KR  R
Sbjct: 236 SSSSKDVMANKPSCPKRTRR 255


>ref|XP_006378354.1| hypothetical protein POPTR_0010s08650g [Populus trichocarpa]
           gi|550329385|gb|ERP56151.1| hypothetical protein
           POPTR_0010s08650g [Populus trichocarpa]
          Length = 257

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 44/78 (56%), Positives = 58/78 (74%)
 Frame = -3

Query: 287 FLGVLNSKKAKLKDLRNQLSKQQTSGKSAEEEKQESTDRTESFSGGSDDDNSEEEPEKNL 108
           FLGVLNSKK KL++LR+QLSK++ SG+SA+EE  E +D+TESF  GSDD+ S E+P + L
Sbjct: 179 FLGVLNSKKRKLRELRDQLSKKEISGESAQEE--EDSDKTESFDRGSDDEKSVEKPREKL 236

Query: 107 TSTSKDVRASKPCGRKRI 54
             TSKD    +   RK+I
Sbjct: 237 AGTSKDPPPRRGYVRKKI 254