BLASTX nr result

ID: Cornus23_contig00025209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00025209
         (338 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010255177.1| PREDICTED: pentatricopeptide repeat-containi...   139   8e-31
ref|XP_010664915.1| PREDICTED: putative pentatricopeptide repeat...   134   3e-29
ref|XP_010671552.1| PREDICTED: pentatricopeptide repeat-containi...   132   8e-29
gb|KNA15281.1| hypothetical protein SOVF_099680 [Spinacia oleracea]   124   4e-26
ref|XP_006852897.2| PREDICTED: putative pentatricopeptide repeat...   100   6e-19
ref|XP_008777992.1| PREDICTED: putative pentatricopeptide repeat...    91   4e-16
ref|XP_010909359.1| PREDICTED: pentatricopeptide repeat-containi...    89   1e-15
ref|XP_009409010.1| PREDICTED: pentatricopeptide repeat-containi...    77   7e-12

>ref|XP_010255177.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Nelumbo nucifera]
          Length = 564

 Score =  139 bits (350), Expect = 8e-31
 Identities = 66/112 (58%), Positives = 85/112 (75%)
 Frame = -1

Query: 338 DVETVWNEICVPESSTIRRIDVSDYFIYVCKFGGVCEIKSICERILSGCGVLKKQSYIAL 159
           D ++ WNE+C  + S+ RRID S++ IY+CKFG   EI+ IC+R+L G G L+ QSYIAL
Sbjct: 148 DADSFWNEVCGSDLSSDRRIDSSEFVIYLCKFGRDLEIERICDRVLMGGGALRFQSYIAL 207

Query: 158 IGALCRVNEGLLAKEVVREMYNKGFIVDDLTYFVMFQCFCRNGDLGEADLIL 3
           IGALCR ++G LAK V++EM  KG   D+LTY +MFQCFCRNG+L EAD IL
Sbjct: 208 IGALCRESKGHLAKAVLQEMKRKGLKPDNLTYLIMFQCFCRNGELSEADSIL 259


>ref|XP_010664915.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Vitis vinifera]
          Length = 536

 Score =  134 bits (337), Expect = 3e-29
 Identities = 66/112 (58%), Positives = 83/112 (74%)
 Frame = -1

Query: 338 DVETVWNEICVPESSTIRRIDVSDYFIYVCKFGGVCEIKSICERILSGCGVLKKQSYIAL 159
           +VE  W +I  P +     IDVSDY IYVCKFG   +I+ +  RIL GC  L++QSY  L
Sbjct: 125 EVEAFWADIFRPPT-----IDVSDYVIYVCKFGDANDIRRVSHRILMGCSGLRQQSYAGL 179

Query: 158 IGALCRVNEGLLAKEVVREMYNKGFIVDDLTYFVMFQCFCRNGDLGEADLIL 3
           IGALCR NEG+LAKEV+R+M ++GF  DD+T FV+F+CFCRNG+L EADLIL
Sbjct: 180 IGALCRENEGVLAKEVLRQMKSRGFRCDDITSFVLFRCFCRNGNLDEADLIL 231


>ref|XP_010671552.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Beta vulgaris subsp. vulgaris]
           gi|870869828|gb|KMT20573.1| hypothetical protein
           BVRB_1g005550 [Beta vulgaris subsp. vulgaris]
          Length = 551

 Score =  132 bits (333), Expect = 8e-29
 Identities = 67/112 (59%), Positives = 80/112 (71%)
 Frame = -1

Query: 338 DVETVWNEICVPESSTIRRIDVSDYFIYVCKFGGVCEIKSICERILSGCGVLKKQSYIAL 159
           DVE  WN+I     S    I++SDY IYVCK G   EIK + ER+L G  VL +QSY+AL
Sbjct: 141 DVEVQWNDI-----SNGYEINLSDYVIYVCKCGDFDEIKKVYERVLMGSRVLGRQSYVAL 195

Query: 158 IGALCRVNEGLLAKEVVREMYNKGFIVDDLTYFVMFQCFCRNGDLGEADLIL 3
           IG LCR +EGL+AK VV EMY +GF VDD+TY V+FQCFCRNGDL  AD +L
Sbjct: 196 IGVLCRYDEGLMAKSVVHEMYYRGFRVDDVTYIVVFQCFCRNGDLDGADWVL 247


>gb|KNA15281.1| hypothetical protein SOVF_099680 [Spinacia oleracea]
          Length = 572

 Score =  124 bits (310), Expect = 4e-26
 Identities = 61/109 (55%), Positives = 77/109 (70%)
 Frame = -1

Query: 338 DVETVWNEICVPESSTIRRIDVSDYFIYVCKFGGVCEIKSICERILSGCGVLKKQSYIAL 159
           DVE  W EI     S    I++SDY IYV K G + EIK +C+R+L G  VL++QSY+AL
Sbjct: 147 DVEVQWGEI-----SNGYGINLSDYVIYVSKCGDLDEIKKVCDRVLMGSRVLERQSYVAL 201

Query: 158 IGALCRVNEGLLAKEVVREMYNKGFIVDDLTYFVMFQCFCRNGDLGEAD 12
           IG LCR NEG +AK ++ EMY +GF +DD+TY V+FQC CRNGDL  AD
Sbjct: 202 IGVLCRYNEGSMAKLLLHEMYCRGFNIDDVTYIVIFQCLCRNGDLNAAD 250


>ref|XP_006852897.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Amborella trichopoda]
          Length = 514

 Score =  100 bits (248), Expect = 6e-19
 Identities = 52/112 (46%), Positives = 73/112 (65%)
 Frame = -1

Query: 338 DVETVWNEICVPESSTIRRIDVSDYFIYVCKFGGVCEIKSICERILSGCGVLKKQSYIAL 159
           DVE  + EI    + ++  I+VS +  Y+CK G   E K++C+R+L    +L+ QSY+AL
Sbjct: 89  DVECTFEEII--GNGSLANINVSTFMNYLCKLGKAREAKNVCQRVLMENVILEYQSYLAL 146

Query: 158 IGALCRVNEGLLAKEVVREMYNKGFIVDDLTYFVMFQCFCRNGDLGEADLIL 3
           IG LC+ NE  LA EV+R M   GF  D +T+ +MFQCFCR G + EAD+IL
Sbjct: 147 IGGLCQKNEAFLAGEVLRAMEQNGFQPDYITHLLMFQCFCRLGLVYEADIIL 198


>ref|XP_008777992.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Phoenix dactylifera]
          Length = 541

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
 Frame = -1

Query: 338 DVETVWNEICVPESSTIRRIDVSDYFIYVCKFG-GVCEIKSICERILSGCGVLKKQSYIA 162
           DVE+VW EI    S+  R +D SD+ +Y+C+      EI+ +  R+ S    L+++ Y+A
Sbjct: 118 DVESVWREIGSGPSN--RCMDASDFVLYLCRRSEDAAEIERVYHRVSSSRWDLRREGYVA 175

Query: 161 LIGALCRVNEGL--LAKEVVREMYNKGFIVDDLTYFVMFQCFCRNGDLGEADLIL 3
           LIGA+C  N     LA+ V+REM  KGF  D LTYF +FQ FCR G++ EAD +L
Sbjct: 176 LIGAMCEGNNPNPGLARNVLREMEEKGFEADVLTYFALFQSFCRTGNVLEADSVL 230


>ref|XP_010909359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63400-like [Elaeis guineensis]
          Length = 539

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
 Frame = -1

Query: 338 DVETVWNEICVPESSTIRRIDVSDYFIYVCKFG-GVCEIKSICERILSGCGVLKKQSYIA 162
           DVE+VW +I    S   R +D  D+ +Y+C+ G    EI+ +  R+ S    L+++ Y+A
Sbjct: 118 DVESVWRDIGSGPSD--RCMDALDFVVYLCRRGEDAAEIERVYHRVSSSRWDLRREGYVA 175

Query: 161 LIGALCRVNEG--LLAKEVVREMYNKGFIVDDLTYFVMFQCFCRNGDLGEADLIL 3
           LIGA+C  N     LA+ V+REM  KGF  D+LTYF +F+ FCR G++ EAD +L
Sbjct: 176 LIGAICEGNNPNPRLARNVLREMEEKGFEADELTYFSLFRSFCRTGNVLEADSVL 230


>ref|XP_009409010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62720-like [Musa acuminata subsp. malaccensis]
          Length = 580

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
 Frame = -1

Query: 338 DVETVWNEICVPESSTIRRIDVSDYFIYVCKFG-GVCEIKSICERILSGCGVLKKQSYIA 162
           DVE+VW++I       I     SD+ I +C+      EI+ +  R+      L +Q Y+A
Sbjct: 152 DVESVWHDIRGGGPDGIS--GASDFVIGLCRRRVDASEIEQVYRRVSRSRWSLSRQRYMA 209

Query: 161 LIGALCRVN--EGLLAKEVVREMYNKGFIVDDLTYFVMFQCFCRNGDLGEADLIL 3
           LIGA C+ +     LA+ V+REM  KGF  D+LTYF +F+ FCR G++ EADL+L
Sbjct: 210 LIGAFCQSSCPNPSLARAVLREMEEKGFEADELTYFAIFRSFCRVGNVFEADLVL 264


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