BLASTX nr result
ID: Cornus23_contig00024931
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00024931
(285 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011005319.1| PREDICTED: mRNA turnover protein 4 homolog [... 109 7e-22
ref|XP_011040546.1| PREDICTED: mRNA turnover protein 4 homolog [... 109 7e-22
ref|XP_002317075.1| acidic ribosomal protein P0 [Populus trichoc... 109 7e-22
ref|XP_002299012.1| acidic ribosomal protein P0 [Populus trichoc... 109 7e-22
ref|XP_013662721.1| PREDICTED: mRNA turnover protein 4 homolog [... 107 5e-21
ref|XP_011087782.1| PREDICTED: mRNA turnover protein 4 homolog [... 106 6e-21
ref|NP_001275260.1| mRNA turnover protein 4 homolog [Solanum tub... 106 8e-21
ref|XP_004230519.1| PREDICTED: mRNA turnover protein 4 homolog [... 106 8e-21
ref|XP_013657198.1| PREDICTED: mRNA turnover protein 4 homolog [... 105 1e-20
ref|XP_013625664.1| PREDICTED: mRNA turnover protein 4 homolog [... 105 1e-20
ref|XP_010673382.1| PREDICTED: mRNA turnover protein 4 homolog [... 105 1e-20
emb|CDY36122.1| BnaA08g19260D [Brassica napus] 105 1e-20
emb|CDY51987.1| BnaC03g75630D [Brassica napus] 105 1e-20
gb|KFK44535.1| hypothetical protein AALP_AA1G269500 [Arabis alpina] 105 1e-20
ref|XP_013596518.1| PREDICTED: mRNA turnover protein 4 homolog i... 105 2e-20
ref|XP_013596517.1| PREDICTED: mRNA turnover protein 4 homolog i... 105 2e-20
ref|XP_009791062.1| PREDICTED: mRNA turnover protein 4 homolog [... 105 2e-20
ref|XP_009624930.1| PREDICTED: mRNA turnover protein 4 homolog [... 105 2e-20
ref|XP_009103052.1| PREDICTED: mRNA turnover protein 4 homolog [... 105 2e-20
gb|AAG28799.1|AC079374_2 unknown protein [Arabidopsis thaliana] 105 2e-20
>ref|XP_011005319.1| PREDICTED: mRNA turnover protein 4 homolog [Populus euphratica]
Length = 229
Score = 109 bits (273), Expect = 7e-22
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKRNR VTLSKTKKKGREHKESIVNSIR+AVEKY+ ++VFSFENMRNLKFKEFREQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQ 59
>ref|XP_011040546.1| PREDICTED: mRNA turnover protein 4 homolog [Populus euphratica]
Length = 229
Score = 109 bits (273), Expect = 7e-22
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKRNR VTLSKTKKKGREHKESIVNSIR+AVEKY+ ++VFSFENMRNLKFKEFREQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQ 59
>ref|XP_002317075.1| acidic ribosomal protein P0 [Populus trichocarpa]
gi|222860140|gb|EEE97687.1| acidic ribosomal protein P0
[Populus trichocarpa]
Length = 229
Score = 109 bits (273), Expect = 7e-22
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKRNR VTLSKTKKKGREHKESIVNSIR+AVEKY+ ++VFSFENMRNLKFKEFREQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQ 59
>ref|XP_002299012.1| acidic ribosomal protein P0 [Populus trichocarpa]
gi|118486150|gb|ABK94918.1| unknown [Populus
trichocarpa] gi|222846270|gb|EEE83817.1| acidic
ribosomal protein P0 [Populus trichocarpa]
Length = 229
Score = 109 bits (273), Expect = 7e-22
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKRNR VTLSKTKKKGREHKESIVNSIR+AVEKY+ ++VFSFENMRNLKFKEFREQ
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQ 59
>ref|XP_013662721.1| PREDICTED: mRNA turnover protein 4 homolog [Brassica napus]
gi|923914627|ref|XP_013726888.1| PREDICTED: mRNA
turnover protein 4 homolog [Brassica napus]
gi|923914656|ref|XP_013726901.1| PREDICTED: mRNA
turnover protein 4 homolog [Brassica napus]
Length = 229
Score = 107 bits (266), Expect = 5e-21
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKR+R VTLSKTKKKGREHKESIVN IREAVEKYS V+VFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKESIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQ 59
>ref|XP_011087782.1| PREDICTED: mRNA turnover protein 4 homolog [Sesamum indicum]
Length = 229
Score = 106 bits (265), Expect = 6e-21
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKRNR VTLSKTKKKGREHKE++VNSIR+AVEKY V+VFSFENMRNLKFKEFRE+
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKENVVNSIRDAVEKYDSVYVFSFENMRNLKFKEFRER 59
>ref|NP_001275260.1| mRNA turnover protein 4 homolog [Solanum tuberosum]
gi|76160923|gb|ABA40425.1| unknown [Solanum tuberosum]
gi|413968558|gb|AFW90616.1| putative ribosomal protein
L1 [Solanum tuberosum]
Length = 229
Score = 106 bits (264), Expect = 8e-21
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKRNRAVTLSKTKKKG+EHKE+IVNSIRE EKYS +VFSFENMRNLKFKEFR+Q
Sbjct: 1 MPKSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQ 59
>ref|XP_004230519.1| PREDICTED: mRNA turnover protein 4 homolog [Solanum lycopersicum]
Length = 229
Score = 106 bits (264), Expect = 8e-21
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKRNRAVTLSKTKKKG+EHKE+IVNSIRE EKYS +VFSFENMRNLKFKEFR+Q
Sbjct: 1 MPKSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQ 59
>ref|XP_013657198.1| PREDICTED: mRNA turnover protein 4 homolog [Brassica napus]
Length = 229
Score = 105 bits (263), Expect = 1e-20
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKR+R VTLSKTKKKGREHKE+IVN IREAVEKYS V+VFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKETIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQ 59
>ref|XP_013625664.1| PREDICTED: mRNA turnover protein 4 homolog [Brassica oleracea var.
oleracea]
Length = 229
Score = 105 bits (263), Expect = 1e-20
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKR+R VTLSKTKKKGREHKE+IVN IREAVEKYS V+VFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKETIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQ 59
>ref|XP_010673382.1| PREDICTED: mRNA turnover protein 4 homolog [Beta vulgaris subsp.
vulgaris] gi|870863667|gb|KMT14822.1| hypothetical
protein BVRB_3g065470 [Beta vulgaris subsp. vulgaris]
Length = 229
Score = 105 bits (263), Expect = 1e-20
Identities = 51/58 (87%), Positives = 56/58 (96%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFRE 4
MPKSKRNRAVTLSKTKKKGREHKE+IVNSIRE+VEKY V+VF+FENMRNLKFK+FRE
Sbjct: 1 MPKSKRNRAVTLSKTKKKGREHKEAIVNSIRESVEKYPSVYVFAFENMRNLKFKQFRE 58
>emb|CDY36122.1| BnaA08g19260D [Brassica napus]
Length = 229
Score = 105 bits (263), Expect = 1e-20
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKR+R VTLSKTKKKGREHKE+IVN IREAVEKYS V+VFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKETIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQ 59
>emb|CDY51987.1| BnaC03g75630D [Brassica napus]
Length = 300
Score = 105 bits (263), Expect = 1e-20
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKR+R VTLSKTKKKGREHKE+IVN IREAVEKYS V+VFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKETIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQ 59
>gb|KFK44535.1| hypothetical protein AALP_AA1G269500 [Arabis alpina]
Length = 229
Score = 105 bits (263), Expect = 1e-20
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKR+R VTLSKTKKKGREHKESIVN IREAVEKY+ V+VFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKESIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQQ 59
>ref|XP_013596518.1| PREDICTED: mRNA turnover protein 4 homolog isoform X2 [Brassica
oleracea var. oleracea]
Length = 219
Score = 105 bits (261), Expect = 2e-20
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKR+R VTLSKTKKKGREHKE IVN IREAVEKYS V+VFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQ 59
>ref|XP_013596517.1| PREDICTED: mRNA turnover protein 4 homolog isoform X1 [Brassica
oleracea var. oleracea]
Length = 229
Score = 105 bits (261), Expect = 2e-20
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKR+R VTLSKTKKKGREHKE IVN IREAVEKYS V+VFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQ 59
>ref|XP_009791062.1| PREDICTED: mRNA turnover protein 4 homolog [Nicotiana sylvestris]
Length = 229
Score = 105 bits (261), Expect = 2e-20
Identities = 50/59 (84%), Positives = 55/59 (93%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKRNRAVTLSKTKKKG+EHKE+IVN+IRE EKYS +VFSFENMRNLKFKEFR+Q
Sbjct: 1 MPKSKRNRAVTLSKTKKKGKEHKENIVNTIRECAEKYSSAYVFSFENMRNLKFKEFRDQ 59
>ref|XP_009624930.1| PREDICTED: mRNA turnover protein 4 homolog [Nicotiana
tomentosiformis]
Length = 229
Score = 105 bits (261), Expect = 2e-20
Identities = 50/59 (84%), Positives = 55/59 (93%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKRNRAVTLSKTKKKG+EHKE+IVN+IRE EKYS +VFSFENMRNLKFKEFR+Q
Sbjct: 1 MPKSKRNRAVTLSKTKKKGKEHKENIVNTIRECAEKYSSAYVFSFENMRNLKFKEFRDQ 59
>ref|XP_009103052.1| PREDICTED: mRNA turnover protein 4 homolog [Brassica rapa]
gi|923867599|ref|XP_013708565.1| PREDICTED: mRNA
turnover protein 4 homolog [Brassica napus]
gi|674870284|emb|CDY64691.1| BnaA07g37200D [Brassica
napus]
Length = 229
Score = 105 bits (261), Expect = 2e-20
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKR+R VTLSKTKKKGREHKE IVN IREAVEKYS V+VFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQ 59
>gb|AAG28799.1|AC079374_2 unknown protein [Arabidopsis thaliana]
Length = 231
Score = 105 bits (261), Expect = 2e-20
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = -1
Query: 177 MPKSKRNRAVTLSKTKKKGREHKESIVNSIREAVEKYSLVFVFSFENMRNLKFKEFREQ 1
MPKSKR+R VTLSKTKKKGREHKE IVN IREAVEKYS V+VFSFENMRN+KFKEFR+Q
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQ 59