BLASTX nr result
ID: Cornus23_contig00024446
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00024446
(405 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010647203.1| PREDICTED: splicing factor U2af large subuni... 80 6e-13
ref|XP_010647283.1| PREDICTED: splicing factor U2af large subuni... 80 6e-13
emb|CBI14816.3| unnamed protein product [Vitis vinifera] 80 6e-13
ref|XP_010242964.1| PREDICTED: splicing factor U2af large subuni... 70 5e-10
ref|XP_010242963.1| PREDICTED: splicing factor U2af large subuni... 70 5e-10
ref|XP_012335453.1| hypothetical protein AK88_02399 [Plasmodium ... 60 5e-07
ref|XP_008383770.1| PREDICTED: splicing factor U2af large subuni... 59 1e-06
ref|XP_008383769.1| PREDICTED: splicing factor U2af large subuni... 59 1e-06
ref|XP_011460245.1| PREDICTED: splicing factor U2af large subuni... 58 2e-06
ref|XP_011460244.1| PREDICTED: splicing factor U2af large subuni... 58 2e-06
ref|XP_004293510.1| PREDICTED: splicing factor U2af large subuni... 58 2e-06
ref|XP_010095280.1| Splicing factor U2af large subunit B [Morus ... 57 5e-06
ref|XP_009337901.1| PREDICTED: splicing factor U2af large subuni... 57 5e-06
ref|XP_009337822.1| PREDICTED: splicing factor U2af large subuni... 57 5e-06
ref|XP_009337759.1| PREDICTED: splicing factor U2af large subuni... 57 5e-06
ref|XP_008777444.1| PREDICTED: splicing factor U2af large subuni... 57 5e-06
emb|CDP02820.1| unnamed protein product [Coffea canephora] 56 9e-06
emb|CCX31148.1| Similar to Chromodomain helicase hrp3; acc. no. ... 56 9e-06
>ref|XP_010647203.1| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 552
Score = 80.1 bits (196), Expect = 6e-13
Identities = 44/105 (41%), Positives = 57/105 (54%)
Frame = +3
Query: 3 DTRHENDGERXXXXXXXXXXXXXXXXXXFEDRSSHYHKGRSRESDHKSLRTRERDQDRYN 182
DTRH+ +GE FE+R SH HK SRE D + RTRERD+DR N
Sbjct: 5 DTRHDGNGESYRSHSKEGERGGSSPYDAFEERDSH-HKHNSRELDREKSRTRERDRDRNN 63
Query: 183 SRDVRNRDYNGRIARNNRGRDSYRDRGYPRERAYDRHHEYDQNRE 317
+RDY R R++RGR Y + + R R DRHH+Y ++RE
Sbjct: 64 RH---HRDYKDRSLRDDRGRGKYDNYDHHRSRDNDRHHDYSRDRE 105
>ref|XP_010647283.1| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 140
Score = 80.1 bits (196), Expect = 6e-13
Identities = 44/105 (41%), Positives = 57/105 (54%)
Frame = +3
Query: 3 DTRHENDGERXXXXXXXXXXXXXXXXXXFEDRSSHYHKGRSRESDHKSLRTRERDQDRYN 182
DTRH+ +GE FE+R SH HK SRE D + RTRERD+DR N
Sbjct: 5 DTRHDGNGESYRSHSKEGERGGSSPYDAFEERDSH-HKHNSRELDREKSRTRERDRDRNN 63
Query: 183 SRDVRNRDYNGRIARNNRGRDSYRDRGYPRERAYDRHHEYDQNRE 317
+RDY R R++RGR Y + + R R DRHH+Y ++RE
Sbjct: 64 RH---HRDYKDRSLRDDRGRGKYDNYDHHRSRDNDRHHDYSRDRE 105
>emb|CBI14816.3| unnamed protein product [Vitis vinifera]
Length = 144
Score = 80.1 bits (196), Expect = 6e-13
Identities = 44/105 (41%), Positives = 57/105 (54%)
Frame = +3
Query: 3 DTRHENDGERXXXXXXXXXXXXXXXXXXFEDRSSHYHKGRSRESDHKSLRTRERDQDRYN 182
DTRH+ +GE FE+R SH HK SRE D + RTRERD+DR N
Sbjct: 5 DTRHDGNGESYRSHSKEGERGGSSPYDAFEERDSH-HKHNSRELDREKSRTRERDRDRNN 63
Query: 183 SRDVRNRDYNGRIARNNRGRDSYRDRGYPRERAYDRHHEYDQNRE 317
+RDY R R++RGR Y + + R R DRHH+Y ++RE
Sbjct: 64 RH---HRDYKDRSLRDDRGRGKYDNYDHHRSRDNDRHHDYSRDRE 105
>ref|XP_010242964.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Nelumbo nucifera]
Length = 555
Score = 70.5 bits (171), Expect = 5e-10
Identities = 37/76 (48%), Positives = 45/76 (59%)
Frame = +3
Query: 87 FEDRSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRNRDYNGRIARNNRGRDSYRDRGY 266
F+D S +K R SDH R RE D+DR RD +RDY R AR+ RGRD Y D
Sbjct: 38 FDDPDS-LNKHTYRGSDHDRSRNREWDRDRERDRDRHHRDYKDRSARDERGRDKYDDYDR 96
Query: 267 PRERAYDRHHEYDQNR 314
R R YDRH +YD++R
Sbjct: 97 QRSRDYDRHRDYDRDR 112
>ref|XP_010242963.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Nelumbo nucifera]
Length = 556
Score = 70.5 bits (171), Expect = 5e-10
Identities = 37/76 (48%), Positives = 45/76 (59%)
Frame = +3
Query: 87 FEDRSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRNRDYNGRIARNNRGRDSYRDRGY 266
F+D S +K R SDH R RE D+DR RD +RDY R AR+ RGRD Y D
Sbjct: 38 FDDPDS-LNKHTYRGSDHDRSRNREWDRDRERDRDRHHRDYKDRSARDERGRDKYDDYDR 96
Query: 267 PRERAYDRHHEYDQNR 314
R R YDRH +YD++R
Sbjct: 97 QRSRDYDRHRDYDRDR 112
>ref|XP_012335453.1| hypothetical protein AK88_02399 [Plasmodium fragile]
gi|772399640|gb|KJP87965.1| hypothetical protein
AK88_02399 [Plasmodium fragile]
Length = 383
Score = 60.5 bits (145), Expect = 5e-07
Identities = 33/76 (43%), Positives = 42/76 (55%)
Frame = +3
Query: 90 EDRSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRNRDYNGRIARNNRGRDSYRDRGYP 269
E H HK R R+S R R+RD+DR+ RD R+RD +R RD +RDR +
Sbjct: 275 ESHDRHRHKHRRRDS-----RDRDRDRDRHRDRDRRDRD-------RDRDRDRHRDRDHE 322
Query: 270 RERAYDRHHEYDQNRE 317
RER + R H Y NRE
Sbjct: 323 RERHHKRDHSYSHNRE 338
>ref|XP_008383770.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Malus domestica]
Length = 522
Score = 58.9 bits (141), Expect = 1e-06
Identities = 32/77 (41%), Positives = 42/77 (54%)
Frame = +3
Query: 87 FEDRSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRNRDYNGRIARNNRGRDSYRDRGY 266
+E S H +G RES + R R+R QDR D R Y R R +RGR+SY
Sbjct: 4 YEGVSKHNSRGSERESSWRD-RERDRGQDREKDGDRYTRQYKDRSGRFDRGRNSYDGYRR 62
Query: 267 PRERAYDRHHEYDQNRE 317
R + +DRH +YDQ+RE
Sbjct: 63 GRNQDFDRHRDYDQDRE 79
>ref|XP_008383769.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Malus domestica]
Length = 526
Score = 58.9 bits (141), Expect = 1e-06
Identities = 32/77 (41%), Positives = 42/77 (54%)
Frame = +3
Query: 87 FEDRSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRNRDYNGRIARNNRGRDSYRDRGY 266
+E S H +G RES + R R+R QDR D R Y R R +RGR+SY
Sbjct: 4 YEGVSKHNSRGSERESSWRD-RERDRGQDREKDGDRYTRQYKDRSGRFDRGRNSYDGYRR 62
Query: 267 PRERAYDRHHEYDQNRE 317
R + +DRH +YDQ+RE
Sbjct: 63 GRNQDFDRHRDYDQDRE 79
>ref|XP_011460245.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Fragaria vesca subsp. vesca]
Length = 527
Score = 58.2 bits (139), Expect = 2e-06
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Frame = +3
Query: 93 DRSSHYHKGRSRESDHKSLRT---RERDQDRYNSRDVRNRDYNGRIARNNRGRDSY---- 251
D S H G RES + RERD DRY SRD R DY R R +RGR+ Y
Sbjct: 5 DNSKHKSHGSERESSWRERERGHDRERDDDRY-SRDTR--DYKDRSGRFDRGRNKYSGYS 61
Query: 252 --RDRGYPRERAY--DRHHEYDQNRE 317
R++ Y R R Y DRHH++DQ+R+
Sbjct: 62 GRRNQDYDRSRDYEQDRHHDHDQDRD 87
>ref|XP_011460244.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Fragaria vesca subsp. vesca]
Length = 528
Score = 58.2 bits (139), Expect = 2e-06
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Frame = +3
Query: 93 DRSSHYHKGRSRESDHKSLRT---RERDQDRYNSRDVRNRDYNGRIARNNRGRDSY---- 251
D S H G RES + RERD DRY SRD R DY R R +RGR+ Y
Sbjct: 5 DNSKHKSHGSERESSWRERERGHDRERDDDRY-SRDTR--DYKDRSGRFDRGRNKYSGYS 61
Query: 252 --RDRGYPRERAY--DRHHEYDQNRE 317
R++ Y R R Y DRHH++DQ+R+
Sbjct: 62 GRRNQDYDRSRDYEQDRHHDHDQDRD 87
>ref|XP_004293510.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Fragaria vesca subsp. vesca]
Length = 523
Score = 58.2 bits (139), Expect = 2e-06
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Frame = +3
Query: 93 DRSSHYHKGRSRESDHKSLRT---RERDQDRYNSRDVRNRDYNGRIARNNRGRDSY---- 251
D S H G RES + RERD DRY SRD R DY R R +RGR+ Y
Sbjct: 5 DNSKHKSHGSERESSWRERERGHDRERDDDRY-SRDTR--DYKDRSGRFDRGRNKYSGYS 61
Query: 252 --RDRGYPRERAY--DRHHEYDQNRE 317
R++ Y R R Y DRHH++DQ+R+
Sbjct: 62 GRRNQDYDRSRDYEQDRHHDHDQDRD 87
>ref|XP_010095280.1| Splicing factor U2af large subunit B [Morus notabilis]
gi|587869824|gb|EXB59126.1| Splicing factor U2af large
subunit B [Morus notabilis]
Length = 599
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 96 RSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRNRD-YNGRIARNNRGRDSYRDRGYPR 272
RS + R R+ D R R+RD++R RD +RD + R R RGRD D Y R
Sbjct: 93 RSKDRDRERDRDRDRDRERDRDRDRERERDRDRHHRDRHRDRSDRRERGRDRDDDDDYYR 152
Query: 273 ERAYDRHHEYDQNRE 317
R YDR +YD++RE
Sbjct: 153 SRDYDRRRDYDKDRE 167
>ref|XP_009337901.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Pyrus x bretschneideri]
Length = 521
Score = 57.0 bits (136), Expect = 5e-06
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 87 FEDRSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRN----RDYNGRIARNNRGRDSYR 254
+E S H +G RES S R RERD+DR R+ R++ R R +RGR+SY
Sbjct: 4 YEGGSKHNSRGSERES---SWRDRERDRDRGQDREKDGGRYTREFKDRSGRFDRGRNSYN 60
Query: 255 DRGYPRERAYDRHHEYDQNRE 317
R +DRH +YDQ+RE
Sbjct: 61 GYRRSRNEDFDRHRDYDQDRE 81
>ref|XP_009337822.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Pyrus x bretschneideri]
Length = 522
Score = 57.0 bits (136), Expect = 5e-06
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 87 FEDRSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRN----RDYNGRIARNNRGRDSYR 254
+E S H +G RES S R RERD+DR R+ R++ R R +RGR+SY
Sbjct: 4 YEGGSKHNSRGSERES---SWRDRERDRDRGQDREKDGGRYTREFKDRSGRFDRGRNSYN 60
Query: 255 DRGYPRERAYDRHHEYDQNRE 317
R +DRH +YDQ+RE
Sbjct: 61 GYRRSRNEDFDRHRDYDQDRE 81
>ref|XP_009337759.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Pyrus x bretschneideri]
Length = 526
Score = 57.0 bits (136), Expect = 5e-06
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 87 FEDRSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRN----RDYNGRIARNNRGRDSYR 254
+E S H +G RES S R RERD+DR R+ R++ R R +RGR+SY
Sbjct: 4 YEGGSKHNSRGSERES---SWRDRERDRDRGQDREKDGGRYTREFKDRSGRFDRGRNSYN 60
Query: 255 DRGYPRERAYDRHHEYDQNRE 317
R +DRH +YDQ+RE
Sbjct: 61 GYRRSRNEDFDRHRDYDQDRE 81
>ref|XP_008777444.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Phoenix dactylifera]
Length = 332
Score = 57.0 bits (136), Expect = 5e-06
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +3
Query: 93 DRSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRNRDYNGRIARNNRGRDSYRDRGYPR 272
DR + R RE D R R RD++R D ++RD+ R +++ GRD D G R
Sbjct: 54 DRDREKERDRDRERDRDRGRDRGRDRERDRDCDRQHRDHRDRSEKSDHGRDRSDDHGRHR 113
Query: 273 ERAYDRHHEYDQNRE 317
R YDR +YD+++E
Sbjct: 114 SRDYDRRRDYDRDKE 128
>emb|CDP02820.1| unnamed protein product [Coffea canephora]
Length = 590
Score = 56.2 bits (134), Expect = 9e-06
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +3
Query: 93 DRSSHYHKGRSRESDHKSLRTRERDQDRYNSRDVRNRDYNGRIARNNRGRDSYRDRGYPR 272
DR + + R+ D R R++D+DR++ R+RD + R R R RD D Y R
Sbjct: 73 DREGERSRDKDRDRDRDRERDRDKDRDRHHRDRDRHRDRSERREREERTRDRDDDGDYHR 132
Query: 273 ERAYDRHHEYDQNRE 317
R YDR +YD++RE
Sbjct: 133 SREYDRRRDYDRDRE 147
>emb|CCX31148.1| Similar to Chromodomain helicase hrp3; acc. no. O14139 [Pyronema
omphalodes CBS 100304]
Length = 1641
Score = 56.2 bits (134), Expect = 9e-06
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = +3
Query: 111 HKGRSRESDHKSLRTRERDQDRYNSRDVRNRDYNGRIARNNRGRDSYRDRGYPRERAYDR 290
H+ R R+ DH+ R R RD+D +SRD+R+ N R +R+NR R+ RDR R+R DR
Sbjct: 1397 HRDRDRDRDHRD-RDRTRDRDNRDSRDIRDSRDN-RDSRDNRDRERDRDRERDRDRERDR 1454
Query: 291 HHEYDQNRE 317
E D++RE
Sbjct: 1455 DRERDRDRE 1463