BLASTX nr result
ID: Cornus23_contig00024123
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00024123
(433 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005651127.1| Rubisco activase [Coccomyxa subellipsoidea C... 97 4e-18
ref|XP_005852227.1| hypothetical protein CHLNCDRAFT_133490 [Chlo... 97 4e-18
gb|AEL29575.1| chloroplast rubisco activase [Chlorella pyrenoidosa] 97 5e-18
ref|XP_005843275.1| hypothetical protein CHLNCDRAFT_141315 [Chlo... 94 5e-17
emb|CAA71667.1| Rubisco activase [Chlorococcum littorale] 93 9e-17
ref|XP_013891754.1| Ribulose bisphosphate carboxylase/oxygenasea... 92 1e-16
ref|XP_013894543.1| Ribulose bisphosphate carboxylase/oxygenasea... 90 6e-16
ref|XP_011400803.1| Ribulose bisphosphate carboxylase/oxygenase ... 88 3e-15
ref|XP_010517331.1| PREDICTED: ribulose bisphosphate carboxylase... 85 2e-14
ref|XP_010517330.1| PREDICTED: ribulose bisphosphate carboxylase... 85 2e-14
ref|XP_010508985.1| PREDICTED: ribulose bisphosphate carboxylase... 85 2e-14
ref|XP_010508984.1| PREDICTED: ribulose bisphosphate carboxylase... 85 2e-14
ref|XP_010505657.1| PREDICTED: ribulose bisphosphate carboxylase... 85 2e-14
ref|XP_010505656.1| PREDICTED: ribulose bisphosphate carboxylase... 85 2e-14
ref|XP_002881673.1| hypothetical protein ARALYDRAFT_482998 [Arab... 85 2e-14
ref|XP_002312110.2| hypothetical protein POPTR_0008s05870g [Popu... 84 4e-14
gb|ABK95328.1| unknown [Populus trichocarpa] 84 4e-14
ref|XP_006379606.1| hypothetical protein POPTR_0008s05870g [Popu... 84 4e-14
ref|XP_006411205.1| hypothetical protein EUTSA_v10016600mg [Eutr... 84 5e-14
ref|XP_006411204.1| hypothetical protein EUTSA_v10016600mg [Eutr... 84 5e-14
>ref|XP_005651127.1| Rubisco activase [Coccomyxa subellipsoidea C-169]
gi|384253108|gb|EIE26583.1| Rubisco activase [Coccomyxa
subellipsoidea C-169]
Length = 421
Score = 97.4 bits (241), Expect = 4e-18
Identities = 51/77 (66%), Positives = 57/77 (74%)
Frame = -1
Query: 433 DFVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS 254
+FV +G+ENIGKRLVNSRE KV FEKP M+L L+KYG LL DEQENV+RVQLADSY S
Sbjct: 348 EFVSTIGLENIGKRLVNSREAKVTFEKPEMDLNTLLKYGNLLVDEQENVKRVQLADSYLS 407
Query: 253 GEASVPELEKKGASLLG 203
G K G SLLG
Sbjct: 408 GAELA---GKSGGSLLG 421
>ref|XP_005852227.1| hypothetical protein CHLNCDRAFT_133490 [Chlorella variabilis]
gi|307111891|gb|EFN60125.1| hypothetical protein
CHLNCDRAFT_133490 [Chlorella variabilis]
Length = 419
Score = 97.4 bits (241), Expect = 4e-18
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = -1
Query: 433 DFVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS 254
++++G G+ENIGKRLVNSREGKVEF+KPPM L LM YG LL +EQENV+RVQLAD Y S
Sbjct: 341 EWIQGTGVENIGKRLVNSREGKVEFDKPPMPLSTLMNYGNLLVEEQENVKRVQLADEYMS 400
Query: 253 GEA 245
G A
Sbjct: 401 GAA 403
>gb|AEL29575.1| chloroplast rubisco activase [Chlorella pyrenoidosa]
Length = 413
Score = 97.1 bits (240), Expect = 5e-18
Identities = 44/63 (69%), Positives = 53/63 (84%)
Frame = -1
Query: 433 DFVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS 254
+++ G G+ENIGKRL+NSREGKVEFEKP MNL LM+YG +L +EQENV+RVQLAD Y S
Sbjct: 336 EWITGTGVENIGKRLINSREGKVEFEKPSMNLSTLMQYGNMLVEEQENVKRVQLADEYMS 395
Query: 253 GEA 245
G A
Sbjct: 396 GAA 398
>ref|XP_005843275.1| hypothetical protein CHLNCDRAFT_141315 [Chlorella variabilis]
gi|307102907|gb|EFN51173.1| hypothetical protein
CHLNCDRAFT_141315 [Chlorella variabilis]
Length = 295
Score = 93.6 bits (231), Expect = 5e-17
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = -1
Query: 433 DFVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS 254
D++ G G+ENIGKRL+NS+EGKV F+KP M+L LMKYG LL +EQENV+RVQLAD Y S
Sbjct: 209 DWIMGTGVENIGKRLINSKEGKVTFDKPSMDLGTLMKYGNLLVEEQENVKRVQLADEYMS 268
Query: 253 GEA 245
G A
Sbjct: 269 GAA 271
>emb|CAA71667.1| Rubisco activase [Chlorococcum littorale]
Length = 403
Score = 92.8 bits (229), Expect = 9e-17
Identities = 43/61 (70%), Positives = 51/61 (83%)
Frame = -1
Query: 433 DFVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS 254
+FVK G+EN+ KRL+NSREGKV FEKP MNL+ LMKYGK LT+EQENV+RVQLA+ Y
Sbjct: 326 EFVKNTGVENLSKRLINSREGKVVFEKPSMNLDILMKYGKFLTNEQENVKRVQLAEEYMM 385
Query: 253 G 251
G
Sbjct: 386 G 386
>ref|XP_013891754.1| Ribulose bisphosphate carboxylase/oxygenaseactivase [Monoraphidium
neglectum] gi|761957927|gb|KIY92734.1| Ribulose
bisphosphate carboxylase/oxygenaseactivase
[Monoraphidium neglectum]
Length = 160
Score = 92.0 bits (227), Expect = 1e-16
Identities = 42/61 (68%), Positives = 53/61 (86%)
Frame = -1
Query: 433 DFVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS 254
DFV +G+EN+ KRLVNSREGKVEFEKP M+L+ LMKYG+ L +EQ+NV+RVQLA++Y S
Sbjct: 82 DFVANLGVENLSKRLVNSREGKVEFEKPRMSLDVLMKYGRYLVEEQDNVKRVQLAEAYMS 141
Query: 253 G 251
G
Sbjct: 142 G 142
>ref|XP_013894543.1| Ribulose bisphosphate carboxylase/oxygenaseactivase [Monoraphidium
neglectum] gi|761962614|gb|KIY95523.1| Ribulose
bisphosphate carboxylase/oxygenaseactivase
[Monoraphidium neglectum]
Length = 228
Score = 90.1 bits (222), Expect = 6e-16
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 7/77 (9%)
Frame = -1
Query: 433 DFVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS 254
+FV +G+EN+ KRLVNSREGKVEFEKP M L+ LMKYG+ L +EQ+NV+RVQLA++Y S
Sbjct: 150 EFVSNLGVENLSKRLVNSREGKVEFEKPRMALDVLMKYGRYLVEEQDNVKRVQLAEAYMS 209
Query: 253 GE-------ASVPELEK 224
G +S+PE K
Sbjct: 210 GAELAGSAGSSMPEAYK 226
>ref|XP_011400803.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
[Auxenochlorella protothecoides]
gi|675355374|gb|KFM27814.1| Ribulose bisphosphate
carboxylase/oxygenase activase, chloroplastic
[Auxenochlorella protothecoides]
Length = 778
Score = 87.8 bits (216), Expect = 3e-15
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = -1
Query: 433 DFVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS 254
+++ G GIE IGKRLVNSREGKV F+KP M L+ LMKYG L EQENV+RVQLA+SY S
Sbjct: 299 EWISGTGIEAIGKRLVNSREGKVTFDKPMMTLDVLMKYGNALVGEQENVKRVQLAESYMS 358
Query: 253 GEA 245
G A
Sbjct: 359 GAA 361
>ref|XP_010517331.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
chloroplastic isoform X2 [Camelina sativa]
Length = 446
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/73 (56%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
FV+G+G+E IGKRLVNSREG +FE+P M LE LM+YG +L EQ+NV+RVQLAD+Y S
Sbjct: 360 FVEGLGVEKIGKRLVNSREGPPKFEQPEMTLEKLMEYGNMLVMEQDNVKRVQLADTYLSQ 419
Query: 253 ---GEASVPELEK 224
G+A+ +++
Sbjct: 420 AALGDANADAIDR 432
>ref|XP_010517330.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
chloroplastic isoform X1 [Camelina sativa]
Length = 474
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/73 (56%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
FV+G+G+E IGKRLVNSREG +FE+P M LE LM+YG +L EQ+NV+RVQLAD+Y S
Sbjct: 360 FVEGLGVEKIGKRLVNSREGPPKFEQPEMTLEKLMEYGNMLVMEQDNVKRVQLADTYLSQ 419
Query: 253 ---GEASVPELEK 224
G+A+ +++
Sbjct: 420 AALGDANADAIDR 432
>ref|XP_010508985.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
chloroplastic-like isoform X2 [Camelina sativa]
Length = 446
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/73 (56%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
FV+G+G+E IGKRLVNSREG +FE+P M LE LM+YG +L EQ+NV+RVQLAD+Y S
Sbjct: 360 FVEGLGVEKIGKRLVNSREGPPKFEQPEMTLEKLMEYGNMLVMEQDNVKRVQLADTYLSQ 419
Query: 253 ---GEASVPELEK 224
G+A+ +++
Sbjct: 420 AALGDANADAIDR 432
>ref|XP_010508984.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
chloroplastic-like isoform X1 [Camelina sativa]
Length = 474
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/73 (56%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
FV+G+G+E IGKRLVNSREG +FE+P M LE LM+YG +L EQ+NV+RVQLAD+Y S
Sbjct: 360 FVEGLGVEKIGKRLVNSREGPPKFEQPEMTLEKLMEYGNMLVMEQDNVKRVQLADTYLSQ 419
Query: 253 ---GEASVPELEK 224
G+A+ +++
Sbjct: 420 AALGDANADAIDR 432
>ref|XP_010505657.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
chloroplastic-like isoform X2 [Camelina sativa]
Length = 446
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/73 (56%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
FV+G+G+E IGKRLVNSREG +FE+P M LE LM+YG +L EQ+NV+RVQLAD+Y S
Sbjct: 360 FVEGLGVEKIGKRLVNSREGPPKFEQPEMTLEKLMEYGNMLVMEQDNVKRVQLADTYLSQ 419
Query: 253 ---GEASVPELEK 224
G+A+ +++
Sbjct: 420 AALGDANADAIDR 432
>ref|XP_010505656.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
chloroplastic-like isoform X1 [Camelina sativa]
Length = 474
Score = 85.1 bits (209), Expect = 2e-14
Identities = 41/73 (56%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
FV+G+G+E IGKRLVNSREG +FE+P M LE LM+YG +L EQ+NV+RVQLAD+Y S
Sbjct: 360 FVEGLGVEKIGKRLVNSREGPPKFEQPEMTLEKLMEYGNMLVMEQDNVKRVQLADTYLSQ 419
Query: 253 ---GEASVPELEK 224
G+A+ +++
Sbjct: 420 AALGDANADAIDR 432
>ref|XP_002881673.1| hypothetical protein ARALYDRAFT_482998 [Arabidopsis lyrata subsp.
lyrata] gi|297327512|gb|EFH57932.1| hypothetical protein
ARALYDRAFT_482998 [Arabidopsis lyrata subsp. lyrata]
Length = 474
Score = 85.1 bits (209), Expect = 2e-14
Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
FV+G+G+E IGKRLVNSREG FE+P M LE LM+YG +L EQENV+RVQLAD+Y S
Sbjct: 360 FVEGLGVEKIGKRLVNSREGPPVFEQPEMTLEKLMEYGNMLVMEQENVKRVQLADTYLSQ 419
Query: 253 ---GEASVPELEK 224
G+A+ +++
Sbjct: 420 AALGDANADAIDR 432
>ref|XP_002312110.2| hypothetical protein POPTR_0008s05870g [Populus trichocarpa]
gi|566182579|ref|XP_006379605.1| Ribulose bisphosphate
carboxylase/oxygenase activase family protein [Populus
trichocarpa] gi|550332512|gb|EEE89477.2| hypothetical
protein POPTR_0008s05870g [Populus trichocarpa]
gi|550332513|gb|ERP57402.1| Ribulose bisphosphate
carboxylase/oxygenase activase family protein [Populus
trichocarpa]
Length = 440
Score = 84.0 bits (206), Expect = 4e-14
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
+V G+G+E+IGK+LVNSREG FE+PPM +E L +YG +L EQENV+RVQLAD Y S
Sbjct: 363 WVSGVGVESIGKKLVNSREGPPTFEQPPMTVEKLFEYGNMLVKEQENVKRVQLADKYLSD 422
Query: 253 ---GEASVPELEK 224
GEA+ +E+
Sbjct: 423 AALGEANQDAIER 435
>gb|ABK95328.1| unknown [Populus trichocarpa]
Length = 361
Score = 84.0 bits (206), Expect = 4e-14
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
+V G+G+E+IGK+LVNSREG FE+PPM +E L +YG +L EQENV+RVQLAD Y S
Sbjct: 284 WVSGVGVESIGKKLVNSREGPPTFEQPPMTVEKLFEYGNMLVKEQENVKRVQLADKYLSD 343
Query: 253 ---GEASVPELEK 224
GEA+ +E+
Sbjct: 344 AALGEANQDAIER 356
>ref|XP_006379606.1| hypothetical protein POPTR_0008s05870g [Populus trichocarpa]
gi|118486739|gb|ABK95205.1| unknown [Populus
trichocarpa] gi|550332514|gb|ERP57403.1| hypothetical
protein POPTR_0008s05870g [Populus trichocarpa]
Length = 475
Score = 84.0 bits (206), Expect = 4e-14
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
+V G+G+E+IGK+LVNSREG FE+PPM +E L +YG +L EQENV+RVQLAD Y S
Sbjct: 363 WVSGVGVESIGKKLVNSREGPPTFEQPPMTVEKLFEYGNMLVKEQENVKRVQLADKYLSD 422
Query: 253 ---GEASVPELEK 224
GEA+ +E+
Sbjct: 423 AALGEANQDAIER 435
>ref|XP_006411205.1| hypothetical protein EUTSA_v10016600mg [Eutrema salsugineum]
gi|557112374|gb|ESQ52658.1| hypothetical protein
EUTSA_v10016600mg [Eutrema salsugineum]
Length = 474
Score = 83.6 bits (205), Expect = 5e-14
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
FV+G+G+E IGKRLVNSREG FE+P M LE LM+YG +L EQENV+RVQLAD Y +
Sbjct: 360 FVEGLGVEKIGKRLVNSREGPPVFEQPEMTLEKLMEYGNMLVMEQENVKRVQLADQYLNE 419
Query: 253 ---GEASVPELEK 224
G+A+ +++
Sbjct: 420 AALGDANADAIDR 432
>ref|XP_006411204.1| hypothetical protein EUTSA_v10016600mg [Eutrema salsugineum]
gi|312281705|dbj|BAJ33718.1| unnamed protein product
[Thellungiella halophila] gi|557112373|gb|ESQ52657.1|
hypothetical protein EUTSA_v10016600mg [Eutrema
salsugineum]
Length = 437
Score = 83.6 bits (205), Expect = 5e-14
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
Frame = -1
Query: 430 FVKGMGIENIGKRLVNSREGKVEFEKPPMNLENLMKYGKLLTDEQENVRRVQLADSYFS- 254
FV+G+G+E IGKRLVNSREG FE+P M LE LM+YG +L EQENV+RVQLAD Y +
Sbjct: 360 FVEGLGVEKIGKRLVNSREGPPVFEQPEMTLEKLMEYGNMLVMEQENVKRVQLADQYLNE 419
Query: 253 ---GEASVPELEK 224
G+A+ +++
Sbjct: 420 AALGDANADAIDR 432