BLASTX nr result
ID: Cornus23_contig00024071
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00024071
(500 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q70XV2.1|NU4C_AMBTC RecName: Full=NAD(P)H-quinone oxidoreduct... 55 4e-12
ref|NP_904149.1| NADH dehydrogenase subunit 4 [Amborella trichop... 55 4e-12
ref|YP_009123307.1| NADH-plastoquinone oxidoreductase subunit 4 ... 57 8e-12
ref|YP_001294153.1| NADH-plastoquinone oxidoreductase subunit 4 ... 57 8e-12
sp|Q2VED0.1|NU4C_SOLTU RecName: Full=NAD(P)H-quinone oxidoreduct... 53 2e-11
gb|AFU96414.1| NdhD, partial (chloroplast) [Hypericum kalmianum] 50 5e-10
gb|ALI30906.1| NADH dehydrogenase subunit 4 (plastid) [Brighamia... 54 5e-10
gb|AFB76997.1| NADH dehydrogenase subunit 4, partial (chloroplas... 55 1e-09
gb|AFU96413.1| NdhD, partial (chloroplast) [Hypericum fraseri] 50 2e-09
gb|AFU96437.1| NdhD, partial (chloroplast) [Vismia ferruginea] 47 1e-08
gb|AFU96415.1| NdhD, partial (chloroplast) [Hypericum perforatum] 46 1e-08
ref|XP_003598193.1| NADH-ubiquinone/plastoquinone (complex I) pr... 49 2e-06
ref|YP_009179558.1| NADH-plastoquinone oxidoreductase subunit 4 ... 57 5e-06
gb|AKC98724.1| NADH-plastoquinone oxidoreductase subunit 4 (chlo... 57 5e-06
gb|AKC98639.1| NADH-plastoquinone oxidoreductase subunit 4 (chlo... 57 5e-06
ref|YP_009179643.1| NADH-plastoquinone oxidoreductase subunit 4 ... 57 5e-06
gb|ALB78352.1| NADH-plastoquinone oxidoreductase subunit 4 (chlo... 57 5e-06
ref|YP_009170319.1| NADH-plastoquinone oxidoreductase subunit 4 ... 57 5e-06
ref|YP_009164457.1| NADH-plastoquinone oxidoreductase subunit 4 ... 57 5e-06
ref|YP_009164367.1| NdhD (chloroplast) [Bupleurum falcatum] gi|7... 57 5e-06
>sp|Q70XV2.1|NU4C_AMBTC RecName: Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|34915839|emb|CAD47815.3| ndhD [Amborella
trichopoda]
Length = 500
Score = 54.7 bits (130), Expect(2) = 4e-12
Identities = 30/55 (54%), Positives = 31/55 (56%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDT LNGAILQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMGSTIIGIGSMTDTALNGAILQIISHGFIGAALFFLAGTSYDRI 356
Score = 42.7 bits (99), Expect(2) = 4e-12
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 222 NHHQINYQHSPVYFLSLLVGTMQIIYTASTSLVQRNLKKRIS 347
N + + HS ++VGT+QIIY ASTSL QRNLKKRI+
Sbjct: 265 NMELLPHAHSLFSPWLVIVGTLQIIYAASTSLGQRNLKKRIA 306
>ref|NP_904149.1| NADH dehydrogenase subunit 4 [Amborella trichopoda]
Length = 500
Score = 54.7 bits (130), Expect(2) = 4e-12
Identities = 30/55 (54%), Positives = 31/55 (56%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDT LNGAILQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMGSTIIGIGSMTDTALNGAILQIISHGFIGAALFFLAGTSYDRI 356
Score = 42.7 bits (99), Expect(2) = 4e-12
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 222 NHHQINYQHSPVYFLSLLVGTMQIIYTASTSLVQRNLKKRIS 347
N + + HS ++VGT+QIIY ASTSL QRNLKKRI+
Sbjct: 265 NMELLPHAHSLFSPWLVIVGTLQIIYAASTSLGQRNLKKRIA 306
>ref|YP_009123307.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Chloranthus japonicus] gi|756761872|gb|AJM69987.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Chloranthus japonicus]
Length = 506
Score = 57.0 bits (136), Expect(2) = 8e-12
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 308 KKRIAYSSVSHMAFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 362
Score = 39.7 bits (91), Expect(2) = 8e-12
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 222 NHHQINYQHSPVYFLSLLVGTMQIIYTASTSLVQRNLKKRIS 347
N + + HS ++VGT+Q+IY ASTS QRNLKKRI+
Sbjct: 271 NMELLPHAHSIFSPWLMIVGTIQVIYAASTSPGQRNLKKRIA 312
>ref|YP_001294153.1| NADH-plastoquinone oxidoreductase subunit 4 [Chloranthus spicatus]
gi|193806223|sp|A6MMH7.1|NU4C_CHLSC RecName:
Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|146744242|gb|ABQ43314.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Chloranthus
spicatus]
Length = 500
Score = 57.0 bits (136), Expect(2) = 8e-12
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMAFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
Score = 39.7 bits (91), Expect(2) = 8e-12
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 222 NHHQINYQHSPVYFLSLLVGTMQIIYTASTSLVQRNLKKRIS 347
N + + HS ++VGT+Q+IY ASTS QRNLKKRI+
Sbjct: 265 NMELLPHAHSIFSPWLMIVGTIQVIYAASTSPGQRNLKKRIA 306
>sp|Q2VED0.1|NU4C_SOLTU RecName: Full=NAD(P)H-quinone oxidoreductase chain 4,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
chain 4; AltName: Full=NADH-plastoquinone oxidoreductase
chain 4 gi|82754674|gb|ABB90088.1| NADH dehydrogenase
subunit 4 [Solanum tuberosum]
Length = 500
Score = 53.1 bits (126), Expect(2) = 2e-11
Identities = 28/55 (50%), Positives = 31/55 (56%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AY SVSHM TDTGLNGA+LQIISH T+YDRI
Sbjct: 302 KKRIAYPSVSHMGFIIIGISSLTDTGLNGALLQIISHGFIGAALFFLAGTTYDRI 356
Score = 42.4 bits (98), Expect(2) = 2e-11
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +3
Query: 222 NHHQINYQHSPVYFLSLLVGTMQIIYTASTSLVQRNLKKRIS 347
N + + HS +++GT+QIIY ASTSL QRNLKKRI+
Sbjct: 265 NMELLPHAHSIFSPWLMIIGTIQIIYAASTSLGQRNLKKRIA 306
>gb|AFU96414.1| NdhD, partial (chloroplast) [Hypericum kalmianum]
Length = 504
Score = 50.1 bits (118), Expect(2) = 5e-10
Identities = 27/54 (50%), Positives = 30/54 (55%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDR 495
KK +A+SSVSHM TD GLNGAILQIISH T+YDR
Sbjct: 305 KKRIAHSSVSHMGFILVGIYSITDLGLNGAILQIISHGFIGAGLFFLAGTNYDR 358
Score = 40.4 bits (93), Expect(2) = 5e-10
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 222 NHHQINYQHSPVYFLSLLVGTMQIIYTASTSLVQRNLKKRIS 347
N + + HS ++VG MQIIY ASTS QRNLKKRI+
Sbjct: 268 NMELLPHAHSLFSPWFVIVGAMQIIYAASTSFGQRNLKKRIA 309
>gb|ALI30906.1| NADH dehydrogenase subunit 4 (plastid) [Brighamia insignis]
Length = 498
Score = 54.3 bits (129), Expect(2) = 5e-10
Identities = 29/55 (52%), Positives = 31/55 (56%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TD GLNGA+LQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMGLILIGIGSITDAGLNGALLQIISHGFIGAAFFFLAGTSYDRI 356
Score = 36.2 bits (82), Expect(2) = 5e-10
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 222 NHHQINYQHSPVYFLSLLVGTMQIIYTASTSLVQRNLKKRIS 347
N + + HS +++GT+QIIY A TS QRN KKRI+
Sbjct: 265 NMELLPHAHSIFSPWLMIIGTIQIIYAALTSSGQRNFKKRIA 306
>gb|AFB76997.1| NADH dehydrogenase subunit 4, partial (chloroplast) [Pereskia
sacharosa]
Length = 498
Score = 55.5 bits (132), Expect(2) = 1e-09
Identities = 31/55 (56%), Positives = 31/55 (56%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 300 KKRKAYSSVSHMGFIIIGISSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 354
Score = 33.9 bits (76), Expect(2) = 1e-09
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 270 LLVGTMQIIYTASTSLVQRNLKKR 341
+++GT+QI Y ASTSL QRNLKKR
Sbjct: 280 IIIGTIQI-YAASTSLGQRNLKKR 302
>gb|AFU96413.1| NdhD, partial (chloroplast) [Hypericum fraseri]
Length = 504
Score = 50.1 bits (118), Expect(2) = 2e-09
Identities = 27/54 (50%), Positives = 30/54 (55%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDR 495
KK +A+SSVSHM TD GLNGAILQIISH T+YDR
Sbjct: 305 KKRIAHSSVSHMGFILLGISSITDLGLNGAILQIISHGLIGAGLFFLAGTNYDR 358
Score = 38.5 bits (88), Expect(2) = 2e-09
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 222 NHHQINYQHSPVYFLSLLVGTMQIIYTASTSLVQRNLKKRIS 347
N + + HS ++VG MQIIY A TS QRNLKKRI+
Sbjct: 268 NMELLPHAHSLFSPWFIIVGAMQIIYAALTSFGQRNLKKRIA 309
>gb|AFU96437.1| NdhD, partial (chloroplast) [Vismia ferruginea]
Length = 504
Score = 46.6 bits (109), Expect(2) = 1e-08
Identities = 25/54 (46%), Positives = 29/54 (53%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDR 495
KK +A+SSVSHM +D GLNGAILQIISH +YDR
Sbjct: 305 KKRIAHSSVSHMGFILLGISSISDLGLNGAILQIISHGFIGAGLFFLAGANYDR 358
Score = 38.9 bits (89), Expect(2) = 1e-08
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 222 NHHQINYQHSPVYFLSLLVGTMQIIYTASTSLVQRNLKKRIS 347
N + + HS ++VG +QIIY ASTS QRNLKKRI+
Sbjct: 268 NMELLPHAHSIFSPWLVIVGAIQIIYAASTSFGQRNLKKRIA 309
>gb|AFU96415.1| NdhD, partial (chloroplast) [Hypericum perforatum]
Length = 504
Score = 46.2 bits (108), Expect(2) = 1e-08
Identities = 25/54 (46%), Positives = 29/54 (53%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDR 495
KK +A+SSVSHM TD GLNGAILQIISH ++DR
Sbjct: 305 KKRIAHSSVSHMGFILIGISSITDLGLNGAILQIISHGFIGAGLFFLAGINFDR 358
Score = 39.3 bits (90), Expect(2) = 1e-08
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 270 LLVGTMQIIYTASTSLVQRNLKKRIS 347
+LVG+MQIIY A TS QRNLKKRI+
Sbjct: 284 VLVGSMQIIYAAPTSFGQRNLKKRIA 309
>ref|XP_003598193.1| NADH-ubiquinone/plastoquinone (complex I) protein [Medicago
truncatula] gi|355487241|gb|AES68444.1|
NADH-ubiquinone/plastoquinone (complex I) protein
[Medicago truncatula]
Length = 129
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSS+SHM +D GLNG +LQIISH TSYD++
Sbjct: 47 KKRIAYSSISHMSFIILGIGSISDIGLNGTVLQIISHGFIGATLFFLAGTSYDKL 101
Score = 29.3 bits (64), Expect(2) = 2e-06
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 270 LLVGTMQIIYTASTSLVQRNLKKRIS 347
+++G++Q+ Y STS Q N KKRI+
Sbjct: 26 MILGSIQMTYADSTSFGQHNFKKRIA 51
>ref|YP_009179558.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Corymbia
henryi] gi|808177442|gb|AKC98808.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Corymbia henryi]
Length = 500
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
>gb|AKC98724.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Corymbia
citriodora subsp. variegata]
Length = 500
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
>gb|AKC98639.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Corymbia
citriodora subsp. variegata]
Length = 500
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
>ref|YP_009179643.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Corymbia
torelliana] gi|808177185|gb|AKC98554.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Corymbia citriodora subsp. citriodora]
gi|808177528|gb|AKC98893.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Corymbia
torelliana] gi|808177613|gb|AKC98977.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Corymbia torelliana]
gi|808177698|gb|AKC99061.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Corymbia
torelliana] gi|808177783|gb|AKC99145.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Corymbia torelliana]
Length = 500
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
>gb|ALB78352.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Heuchera
parviflora var. saurensis]
Length = 500
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMGFIIIGISSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
>ref|YP_009170319.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast) [Silybum
marianum] gi|927682288|gb|ALE29258.1| NADH-plastoquinone
oxidoreductase subunit 4 (chloroplast) [Silybum
marianum]
Length = 506
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 308 KKRIAYSSVSHMGFILIGISSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 362
>ref|YP_009164457.1| NADH-plastoquinone oxidoreductase subunit 4 (chloroplast)
[Leontopodium leiolepis] gi|732663400|gb|AIZ76869.1|
NADH-plastoquinone oxidoreductase subunit 4
(chloroplast) [Leontopodium leiolepis]
Length = 500
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMGFILIGIASITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356
>ref|YP_009164367.1| NdhD (chloroplast) [Bupleurum falcatum] gi|728802734|gb|AIY72353.1|
NdhD (chloroplast) [Bupleurum falcatum]
Length = 500
Score = 57.0 bits (136), Expect = 5e-06
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1
Query: 334 KKELAYSSVSHMXXXXXXXXXXTDTGLNGAILQIISHXXXXXXXXXXXXTSYDRI 498
KK +AYSSVSHM TDTGLNGAILQIISH TSYDRI
Sbjct: 302 KKRIAYSSVSHMGFILIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI 356