BLASTX nr result

ID: Cornus23_contig00024067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00024067
         (494 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|C5IGN8.1|SRRDP_PHYPO RecName: Full=Serine/arginine-rich prote...    96   1e-17

>sp|C5IGN8.1|SRRDP_PHYPO RecName: Full=Serine/arginine-rich protein PSR; Flags: Precursor
           [Physarum polycephalum] gi|237688408|gb|ACR15168.1|
           serine/arginine repeat domain protein [Physarum
           polycephalum]
          Length = 497

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
 Frame = -3

Query: 492 NIMYGDNSDQVSVLHVTDIP---LCNFTSSVSCPVEVTPNYTQAISFDYLVPALANGNYL 322
           ++ Y DN D   +  V DIP   LCN ++S++CP+      T  ++++Y VP +  G Y 
Sbjct: 67  SVYYSDNFDVTGLKPVVDIPGLQLCNLSTSITCPITAG---THILAWEYRVPDVLPGTYQ 123

Query: 321 VNFKI--SLPSRARALACLAFNISISNPSATQNGVFTSSYTAQLEAQAVFSSEVFASRGV 148
           V + I    P      +C+ F+I++      +   FTS Y A L   A+F+   +  R +
Sbjct: 124 VKYTILEDNPPDGNPYSCIQFSITVEGQKTNE---FTSWYQATLLGTALFTQPDYKLRQI 180

Query: 147 GSYIQVGPIGPLGLS----PPWGTFDYISGTADVVHPN--FDSNYYVWGLSGIL 4
           G  +QVGP GPL  S    P  G+  Y+SG+ D+V PN  +D++ +VWGLSG +
Sbjct: 181 GEALQVGPSGPLNGSISPVPYNGSIKYLSGSGDLV-PNAFYDTSNFVWGLSGTM 233


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