BLASTX nr result
ID: Cornus23_contig00024061
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00024061
(284 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263021.1| PREDICTED: glycine-rich RNA-binding protein ... 98 2e-18
ref|XP_008241226.1| PREDICTED: glycine-rich RNA-binding protein ... 92 2e-16
ref|XP_007207675.1| hypothetical protein PRUPE_ppa023139mg, part... 92 2e-16
ref|XP_011624062.1| PREDICTED: glycine-rich RNA-binding protein ... 91 3e-16
ref|XP_010028363.1| PREDICTED: glycine-rich RNA-binding protein ... 91 3e-16
ref|XP_010241007.1| PREDICTED: glycine-rich RNA-binding protein ... 86 1e-14
ref|XP_008226798.1| PREDICTED: glycine-rich RNA-binding protein ... 85 2e-14
ref|XP_007212216.1| hypothetical protein PRUPE_ppa013115mg [Prun... 85 2e-14
ref|XP_009355558.1| PREDICTED: glycine-rich RNA-binding protein ... 84 4e-14
ref|XP_010092279.1| hypothetical protein L484_021140 [Morus nota... 84 5e-14
ref|XP_011048254.1| PREDICTED: glycine-rich RNA-binding protein ... 83 7e-14
ref|XP_010908156.1| PREDICTED: glycine-rich RNA-binding protein ... 83 9e-14
ref|XP_008806788.1| PREDICTED: glycine-rich RNA-binding protein ... 83 9e-14
ref|XP_014491439.1| PREDICTED: glycine-rich RNA-binding protein ... 82 1e-13
ref|XP_009384210.1| PREDICTED: glycine-rich RNA-binding protein ... 82 2e-13
ref|XP_008349954.1| PREDICTED: glycine-rich RNA-binding protein ... 82 2e-13
ref|XP_008349953.1| PREDICTED: glycine-rich RNA-binding protein ... 82 2e-13
ref|XP_002316957.1| RNA-binding family protein [Populus trichoca... 82 2e-13
ref|XP_010267842.1| PREDICTED: glycine-rich RNA-binding protein ... 82 2e-13
ref|XP_008365868.1| PREDICTED: glycine-rich RNA-binding protein ... 82 2e-13
>ref|XP_002263021.1| PREDICTED: glycine-rich RNA-binding protein blt801 [Vitis vinifera]
gi|297740398|emb|CBI30580.3| unnamed protein product
[Vitis vinifera]
Length = 133
Score = 98.2 bits (243), Expect = 2e-18
Identities = 52/81 (64%), Positives = 62/81 (76%), Gaps = 2/81 (2%)
Frame = -1
Query: 239 MAFRAGLIRRFLFSSQPNASTVTAANTLAAP--STTLFVSGLNKRTTSEKLQEAFSKFGD 66
MA RAGL++RF +S ++ T AAN AP STTLF+SGLNKRTTSEKL E SKFG+
Sbjct: 1 MATRAGLLKRFFSTSMFSSQTTAAANAKPAPIPSTTLFISGLNKRTTSEKLNEEASKFGE 60
Query: 65 VEHARVVIDWTSGFSKGYGFV 3
V HARVV D +SG+SKG+GFV
Sbjct: 61 VVHARVVTDRSSGYSKGFGFV 81
>ref|XP_008241226.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial-like
[Prunus mume]
Length = 135
Score = 91.7 bits (226), Expect = 2e-16
Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 18/97 (18%)
Frame = -1
Query: 239 MAFRAGLIRRFL----FSSQPNASTVTAANTLAA--------------PSTTLFVSGLNK 114
MA RAGL+RRFL F+SQ A+ A++ A+ P+TTLFV+GLNK
Sbjct: 1 MALRAGLVRRFLSTPIFASQSRAAATAASSAYASVADSNNISDKATAEPNTTLFVAGLNK 60
Query: 113 RTTSEKLQEAFSKFGDVEHARVVIDWTSGFSKGYGFV 3
RTT EKL EAFS+FG+V + +VVID SGFSKG+GFV
Sbjct: 61 RTTPEKLNEAFSQFGEVVNVKVVIDRDSGFSKGFGFV 97
>ref|XP_007207675.1| hypothetical protein PRUPE_ppa023139mg, partial [Prunus persica]
gi|462403317|gb|EMJ08874.1| hypothetical protein
PRUPE_ppa023139mg, partial [Prunus persica]
Length = 134
Score = 91.7 bits (226), Expect = 2e-16
Identities = 53/97 (54%), Positives = 63/97 (64%), Gaps = 18/97 (18%)
Frame = -1
Query: 239 MAFRAGLIRRFL----FSSQPNASTVTAA--------------NTLAAPSTTLFVSGLNK 114
MA RAGL+RRFL F+SQ A+ A+ A PSTTLFV+GLNK
Sbjct: 1 MALRAGLVRRFLSTPVFASQSRAAATAASLAYASVADSNNISDKATAEPSTTLFVAGLNK 60
Query: 113 RTTSEKLQEAFSKFGDVEHARVVIDWTSGFSKGYGFV 3
RTT EKL EAFS+FG+V + +VVID SGFSKG+GFV
Sbjct: 61 RTTPEKLNEAFSQFGEVVNVKVVIDRDSGFSKGFGFV 97
>ref|XP_011624062.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Amborella trichopoda]
Length = 132
Score = 91.3 bits (225), Expect = 3e-16
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 5/84 (5%)
Frame = -1
Query: 239 MAFRAG--LIRRFLFSSQ-PNASTVTAA--NTLAAPSTTLFVSGLNKRTTSEKLQEAFSK 75
MAFR G +IRR L SS P +S V+A N A PST+LFVSGLNKRTTSEKL+EAF K
Sbjct: 3 MAFRGGGGVIRRLLSSSPFPFSSPVSATPPNPPAVPSTSLFVSGLNKRTTSEKLREAFLK 62
Query: 74 FGDVEHARVVIDWTSGFSKGYGFV 3
FG+V ARVV D SG+SKG+GFV
Sbjct: 63 FGEVVQARVVTDRVSGYSKGFGFV 86
>ref|XP_010028363.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial-like
[Eucalyptus grandis] gi|629088854|gb|KCW55107.1|
hypothetical protein EUGRSUZ_I01065 [Eucalyptus grandis]
Length = 142
Score = 90.9 bits (224), Expect = 3e-16
Identities = 53/91 (58%), Positives = 61/91 (67%), Gaps = 12/91 (13%)
Frame = -1
Query: 239 MAFRAGLIRRFL----FSSQPNASTVTAANTLAA--------PSTTLFVSGLNKRTTSEK 96
MA R G RR L F+SQ +A TAA T AA PS TLFVSGLNKRTT+EK
Sbjct: 1 MAMRLGFARRLLSTSSFASQLSAPAATAAATAAAGSDKPAPIPSDTLFVSGLNKRTTTEK 60
Query: 95 LQEAFSKFGDVEHARVVIDWTSGFSKGYGFV 3
L E+FS+FG V HA+VV D SG+SKG+GFV
Sbjct: 61 LHESFSQFGQVVHAKVVTDRNSGYSKGFGFV 91
>ref|XP_010241007.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Nelumbo nucifera]
Length = 123
Score = 85.5 bits (210), Expect = 1e-14
Identities = 51/86 (59%), Positives = 59/86 (68%), Gaps = 7/86 (8%)
Frame = -1
Query: 239 MAFRA------GLIRRFL-FSSQPNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAF 81
MA RA GL R F F+ P +S T A A PST LFVSGLNKRTTSE L+E+F
Sbjct: 1 MAMRAVAAAPRGLRRLFSSFTFTPPSSAATTAPPPAEPSTNLFVSGLNKRTTSEGLRESF 60
Query: 80 SKFGDVEHARVVIDWTSGFSKGYGFV 3
SKFG+V +ARVV D SG+SKG+GFV
Sbjct: 61 SKFGEVVYARVVTDRVSGYSKGFGFV 86
>ref|XP_008226798.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Prunus mume]
Length = 142
Score = 85.1 bits (209), Expect = 2e-14
Identities = 47/73 (64%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
Frame = -1
Query: 212 RFLFSSQ---PNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGDVEHARVVI 42
R LFS+ P S A A PST LFVSGL+KRTTSEKLQEAFS+FG+V HARVV
Sbjct: 20 RRLFSTSFIPPMNSPAPQAREKAEPSTNLFVSGLSKRTTSEKLQEAFSQFGEVVHARVVT 79
Query: 41 DWTSGFSKGYGFV 3
D SG+SKG+GFV
Sbjct: 80 DRVSGYSKGFGFV 92
>ref|XP_007212216.1| hypothetical protein PRUPE_ppa013115mg [Prunus persica]
gi|462408081|gb|EMJ13415.1| hypothetical protein
PRUPE_ppa013115mg [Prunus persica]
Length = 139
Score = 85.1 bits (209), Expect = 2e-14
Identities = 47/73 (64%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
Frame = -1
Query: 212 RFLFSSQ---PNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGDVEHARVVI 42
R LFS+ P S A A PST LFVSGL+KRTTSEKLQEAFS+FG+V HARVV
Sbjct: 17 RRLFSTSFIPPMNSPAPQAREKAEPSTNLFVSGLSKRTTSEKLQEAFSQFGEVVHARVVT 76
Query: 41 DWTSGFSKGYGFV 3
D SG+SKG+GFV
Sbjct: 77 DRVSGYSKGFGFV 89
>ref|XP_009355558.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Pyrus
x bretschneideri]
Length = 142
Score = 84.0 bits (206), Expect = 4e-14
Identities = 46/75 (61%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = -1
Query: 224 GLIRRFLFSSQPNASTVT-AANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGDVEHARV 48
GL R F S P ++ T +A A PST LFVSGL+KRTT+EKL EAFS+FG+V HARV
Sbjct: 18 GLSRLFSTSFIPPMNSATPSAREQAEPSTNLFVSGLSKRTTTEKLHEAFSQFGEVVHARV 77
Query: 47 VIDWTSGFSKGYGFV 3
V D SG+SKG+GFV
Sbjct: 78 VTDRVSGYSKGFGFV 92
>ref|XP_010092279.1| hypothetical protein L484_021140 [Morus notabilis]
gi|587861049|gb|EXB50913.1| hypothetical protein
L484_021140 [Morus notabilis]
Length = 143
Score = 83.6 bits (205), Expect = 5e-14
Identities = 48/83 (57%), Positives = 57/83 (68%), Gaps = 9/83 (10%)
Frame = -1
Query: 224 GLIRRFLFSSQP---------NASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKF 72
GL+RR LFS+ +A+ A A PS LFVSGL+KRTT+EKL EAFS+F
Sbjct: 12 GLVRR-LFSTTSTSPFIPPPIHAAAQAPARPQADPSANLFVSGLSKRTTTEKLHEAFSQF 70
Query: 71 GDVEHARVVIDWTSGFSKGYGFV 3
G+VEHARVV D SGFSKG+GFV
Sbjct: 71 GEVEHARVVTDRVSGFSKGFGFV 93
>ref|XP_011048254.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Populus euphratica]
Length = 157
Score = 83.2 bits (204), Expect = 7e-14
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
Frame = -1
Query: 230 RAGLIRRFLFSSQ-------PNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKF 72
R GL+R F +S P + T A A P+T LFVSGL+KRTT+E LQEAFSKF
Sbjct: 17 RGGLLRLFSTTSTLSSSFPFPQTTQQTPAREQAEPNTNLFVSGLSKRTTTEGLQEAFSKF 76
Query: 71 GDVEHARVVIDWTSGFSKGYGFV 3
G+V A+VV D TSG+SKG+GFV
Sbjct: 77 GEVVQAKVVTDRTSGYSKGFGFV 99
>ref|XP_010908156.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Elaeis
guineensis]
Length = 138
Score = 82.8 bits (203), Expect = 9e-14
Identities = 50/81 (61%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Frame = -1
Query: 236 AFRAGLIRRF---LFSSQPNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGD 66
A RAG R F FS P A AA A PST LFVSGL+KRTTSE L EAF+KFG
Sbjct: 3 AVRAGFRRLFSISAFSPPPPA----AARPAAEPSTNLFVSGLSKRTTSEGLGEAFAKFGQ 58
Query: 65 VEHARVVIDWTSGFSKGYGFV 3
V HARVV D SG+SKG+GFV
Sbjct: 59 VVHARVVTDRVSGYSKGFGFV 79
>ref|XP_008806788.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial
[Phoenix dactylifera]
Length = 139
Score = 82.8 bits (203), Expect = 9e-14
Identities = 50/80 (62%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = -1
Query: 236 AFRAGLIRRFLFS--SQPNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGDV 63
A RAG R F S S P A+ A A PST LFVSGL+KRTTSE L+EAFSKFG V
Sbjct: 3 AVRAGFRRLFSVSAFSPPPAA---APRPAAEPSTNLFVSGLSKRTTSEGLREAFSKFGQV 59
Query: 62 EHARVVIDWTSGFSKGYGFV 3
HARVV D SG+SKG+GFV
Sbjct: 60 IHARVVTDRVSGYSKGFGFV 79
>ref|XP_014491439.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Vigna
radiata var. radiata]
Length = 144
Score = 82.4 bits (202), Expect = 1e-13
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = -1
Query: 191 PNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGDVEHARVVIDWTSGFSKGY 12
P + T A A P+T LFVSGL+KRTT+EKL+E FSKFG+V HARVV D SG+SKG+
Sbjct: 33 PTGAVPTPARPTAEPNTNLFVSGLSKRTTTEKLREEFSKFGEVVHARVVADRVSGYSKGF 92
Query: 11 GFV 3
GFV
Sbjct: 93 GFV 95
>ref|XP_009384210.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Musa acuminata subsp. malaccensis]
Length = 164
Score = 82.0 bits (201), Expect = 2e-13
Identities = 45/71 (63%), Positives = 48/71 (67%)
Frame = -1
Query: 215 RRFLFSSQPNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGDVEHARVVIDW 36
RR S + AA A PST LFVSGLNKRTTSE L EAFSKFG V HARVV D
Sbjct: 34 RRLFSISAFSPPLPAAARPAAEPSTNLFVSGLNKRTTSEGLWEAFSKFGQVVHARVVTDR 93
Query: 35 TSGFSKGYGFV 3
SG+SKG+GFV
Sbjct: 94 VSGYSKGFGFV 104
>ref|XP_008349954.1| PREDICTED: glycine-rich RNA-binding protein 6, mitochondrial-like
isoform X2 [Malus domestica]
Length = 137
Score = 82.0 bits (201), Expect = 2e-13
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = -1
Query: 191 PNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGDVEHARVVIDWTSGFSKGY 12
P S +A A PST LFVSGL+KRTT+EKL EAFS+FG+V HARVV D SG+SKG+
Sbjct: 30 PMNSATPSAREQAEPSTNLFVSGLSKRTTTEKLHEAFSQFGEVVHARVVTDRVSGYSKGF 89
Query: 11 GFV 3
GFV
Sbjct: 90 GFV 92
>ref|XP_008349953.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Malus domestica]
Length = 142
Score = 82.0 bits (201), Expect = 2e-13
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = -1
Query: 191 PNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGDVEHARVVIDWTSGFSKGY 12
P S +A A PST LFVSGL+KRTT+EKL EAFS+FG+V HARVV D SG+SKG+
Sbjct: 30 PMNSATPSAREQAEPSTNLFVSGLSKRTTTEKLHEAFSQFGEVVHARVVTDRVSGYSKGF 89
Query: 11 GFV 3
GFV
Sbjct: 90 GFV 92
>ref|XP_002316957.1| RNA-binding family protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| RNA-binding family protein
[Populus trichocarpa]
Length = 153
Score = 82.0 bits (201), Expect = 2e-13
Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 7/83 (8%)
Frame = -1
Query: 230 RAGLIRRFLFSSQ-------PNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKF 72
R G +R F +S P + T A A P+T LFVSGL+KRTTSE LQEAFSKF
Sbjct: 19 RGGFLRLFSTTSTSSSSFPFPQTTQQTPAREQAEPNTNLFVSGLSKRTTSEGLQEAFSKF 78
Query: 71 GDVEHARVVIDWTSGFSKGYGFV 3
G+V ARVV D SG+SKG+GFV
Sbjct: 79 GEVVQARVVTDRVSGYSKGFGFV 101
>ref|XP_010267842.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Nelumbo nucifera]
Length = 140
Score = 81.6 bits (200), Expect = 2e-13
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 4/74 (5%)
Frame = -1
Query: 212 RFLFSS----QPNASTVTAANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGDVEHARVV 45
R LFSS P +++ T A A PS LFVSGL+KRTTSE L+EAFSKFG+V HA+VV
Sbjct: 16 RRLFSSFPLPPPPSTSATTAPPPAEPSPNLFVSGLSKRTTSEGLREAFSKFGEVVHAKVV 75
Query: 44 IDWTSGFSKGYGFV 3
D SG+SKG+GFV
Sbjct: 76 TDRVSGYSKGFGFV 89
>ref|XP_008365868.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Malus
domestica]
Length = 142
Score = 81.6 bits (200), Expect = 2e-13
Identities = 45/75 (60%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = -1
Query: 224 GLIRRFLFSSQPNASTVT-AANTLAAPSTTLFVSGLNKRTTSEKLQEAFSKFGDVEHARV 48
GL R F S P ++ T +A A PST LFVSGL+KRTT+EKL E FS+FG+V HARV
Sbjct: 18 GLGRLFSTSFIPPMNSATPSAREQAEPSTNLFVSGLSKRTTTEKLHETFSQFGEVVHARV 77
Query: 47 VIDWTSGFSKGYGFV 3
V D SG+SKG+GFV
Sbjct: 78 VTDRVSGYSKGFGFV 92