BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00023473
         (1470 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010647689.1| PREDICTED: RNA-binding protein 28 isoform X2...   639   e-180
ref|XP_010647688.1| PREDICTED: RNA-binding protein 28 isoform X1...   639   e-180
emb|CBI38027.3| unnamed protein product [Vitis vinifera]              639   e-180
ref|XP_011047784.1| PREDICTED: RNA-binding protein 28 isoform X4...   616   e-173
ref|XP_011047777.1| PREDICTED: RNA-binding protein 28 isoform X3...   616   e-173
ref|XP_011047769.1| PREDICTED: RNA-binding protein 28 isoform X2...   616   e-173
ref|XP_011047760.1| PREDICTED: RNA-binding protein 28 isoform X1...   616   e-173
ref|XP_002313773.2| RNA recognition motif-containing family prot...   608   e-171
ref|XP_007042088.1| RNA-binding family protein, putative [Theobr...   608   e-171
ref|XP_012067208.1| PREDICTED: RNA-binding protein 28 [Jatropha ...   603   e-169
ref|XP_010107840.1| RNA-binding protein 28 [Morus notabilis] gi|...   601   e-169
ref|XP_010254679.1| PREDICTED: RNA-binding protein 28 isoform X3...   600   e-169
ref|XP_010254678.1| PREDICTED: RNA-binding protein 28 isoform X2...   600   e-169
ref|XP_010254677.1| PREDICTED: RNA-binding protein 28 isoform X1...   600   e-169
ref|XP_006487347.1| PREDICTED: RNA-binding protein 28-like isofo...   596   e-167
ref|XP_006487344.1| PREDICTED: RNA-binding protein 28-like isofo...   596   e-167
gb|KDO49468.1| hypothetical protein CISIN_1g0027092mg [Citrus si...   596   e-167
gb|KJB79122.1| hypothetical protein B456_013G034200 [Gossypium r...   591   e-166
ref|XP_012463899.1| PREDICTED: RNA-binding protein 28 [Gossypium...   591   e-166
gb|KHG15251.1| RNA-binding 28 [Gossypium arboreum]                    591   e-166

>ref|XP_010647689.1| PREDICTED: RNA-binding protein 28 isoform X2 [Vitis vinifera]
          Length = 953

 Score =  639 bits (1648), Expect = e-180
 Identities = 334/489 (68%), Positives = 381/489 (77%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWK+IVRNLPFKAKV EIKD+FSSAGFVWD FIPQN+ETGLS+GFAFVKF
Sbjct: 252  QLGGEGSKTQKWKLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKF 311

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            T KQDAENAIQKFNG+  GKRPIAVDWAVPKK + TGA+ VV  +DG             
Sbjct: 312  TSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIYITGANPVVASEDGQLNGRDGEGDTDS 371

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                            PQ   G    P++++T EKEV+ TE DF+EEAD+ARKVLKNL++
Sbjct: 372  DDLEDDTTDIDNKVPHPQ---GVGSAPDDSNTTEKEVMPTEFDFNEEADIARKVLKNLIT 428

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            SSAKG   +L  +S  P     D+ IDV  KTS+ S     +T+P +SSKS+  +L+P E
Sbjct: 429  SSAKG---TLPSSSGGPTDLNFDETIDVLKKTSNESEKASDVTEPENSSKSKLLNLRPIE 485

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
             EDDLQRTIFI NLPFDID EEVKQ+FS FGEVQSFV VLHQVTKRP+GTGFLKF TV  
Sbjct: 486  SEDDLQRTIFISNLPFDIDKEEVKQQFSKFGEVQSFVPVLHQVTKRPKGTGFLKFNTVAA 545

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       + LGIFL+GRQL  LKALDKKSAHDKE+ K+K E+ DHRNLYLAKEGLI
Sbjct: 546  ADAAVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKELKKSKPEERDHRNLYLAKEGLI 605

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            VEGTPAAEGVSASDM KR ML R+K TK +SPNFH+SR RLIIYN+PKSMTEK++KK+ I
Sbjct: 606  VEGTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTRLIIYNLPKSMTEKEVKKLCI 665

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAVTSRATKQKP+I+QIKFLKD KKGK+VT N+SRGVAF+EFTEHQHALVALRVLNNNPE
Sbjct: 666  DAVTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFIEFTEHQHALVALRVLNNNPE 725

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 726  TFGPEHRPI 734


>ref|XP_010647688.1| PREDICTED: RNA-binding protein 28 isoform X1 [Vitis vinifera]
          Length = 957

 Score =  639 bits (1648), Expect = e-180
 Identities = 334/489 (68%), Positives = 381/489 (77%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWK+IVRNLPFKAKV EIKD+FSSAGFVWD FIPQN+ETGLS+GFAFVKF
Sbjct: 256  QLGGEGSKTQKWKLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKF 315

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            T KQDAENAIQKFNG+  GKRPIAVDWAVPKK + TGA+ VV  +DG             
Sbjct: 316  TSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIYITGANPVVASEDGQLNGRDGEGDTDS 375

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                            PQ   G    P++++T EKEV+ TE DF+EEAD+ARKVLKNL++
Sbjct: 376  DDLEDDTTDIDNKVPHPQ---GVGSAPDDSNTTEKEVMPTEFDFNEEADIARKVLKNLIT 432

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            SSAKG   +L  +S  P     D+ IDV  KTS+ S     +T+P +SSKS+  +L+P E
Sbjct: 433  SSAKG---TLPSSSGGPTDLNFDETIDVLKKTSNESEKASDVTEPENSSKSKLLNLRPIE 489

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
             EDDLQRTIFI NLPFDID EEVKQ+FS FGEVQSFV VLHQVTKRP+GTGFLKF TV  
Sbjct: 490  SEDDLQRTIFISNLPFDIDKEEVKQQFSKFGEVQSFVPVLHQVTKRPKGTGFLKFNTVAA 549

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       + LGIFL+GRQL  LKALDKKSAHDKE+ K+K E+ DHRNLYLAKEGLI
Sbjct: 550  ADAAVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKELKKSKPEERDHRNLYLAKEGLI 609

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            VEGTPAAEGVSASDM KR ML R+K TK +SPNFH+SR RLIIYN+PKSMTEK++KK+ I
Sbjct: 610  VEGTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTRLIIYNLPKSMTEKEVKKLCI 669

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAVTSRATKQKP+I+QIKFLKD KKGK+VT N+SRGVAF+EFTEHQHALVALRVLNNNPE
Sbjct: 670  DAVTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFIEFTEHQHALVALRVLNNNPE 729

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 730  TFGPEHRPI 738


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  639 bits (1648), Expect = e-180
 Identities = 334/489 (68%), Positives = 381/489 (77%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWK+IVRNLPFKAKV EIKD+FSSAGFVWD FIPQN+ETGLS+GFAFVKF
Sbjct: 252  QLGGEGSKTQKWKLIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKF 311

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            T KQDAENAIQKFNG+  GKRPIAVDWAVPKK + TGA+ VV  +DG             
Sbjct: 312  TSKQDAENAIQKFNGEKIGKRPIAVDWAVPKKIYITGANPVVASEDGQLNGRDGEGDTDS 371

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                            PQ   G    P++++T EKEV+ TE DF+EEAD+ARKVLKNL++
Sbjct: 372  DDLEDDTTDIDNKVPHPQ---GVGSAPDDSNTTEKEVMPTEFDFNEEADIARKVLKNLIT 428

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            SSAKG   +L  +S  P     D+ IDV  KTS+ S     +T+P +SSKS+  +L+P E
Sbjct: 429  SSAKG---TLPSSSGGPTDLNFDETIDVLKKTSNESEKASDVTEPENSSKSKLLNLRPIE 485

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
             EDDLQRTIFI NLPFDID EEVKQ+FS FGEVQSFV VLHQVTKRP+GTGFLKF TV  
Sbjct: 486  SEDDLQRTIFISNLPFDIDKEEVKQQFSKFGEVQSFVPVLHQVTKRPKGTGFLKFNTVAA 545

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       + LGIFL+GRQL  LKALDKKSAHDKE+ K+K E+ DHRNLYLAKEGLI
Sbjct: 546  ADAAVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKELKKSKPEERDHRNLYLAKEGLI 605

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            VEGTPAAEGVSASDM KR ML R+K TK +SPNFH+SR RLIIYN+PKSMTEK++KK+ I
Sbjct: 606  VEGTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTRLIIYNLPKSMTEKEVKKLCI 665

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAVTSRATKQKP+I+QIKFLKD KKGK+VT N+SRGVAF+EFTEHQHALVALRVLNNNPE
Sbjct: 666  DAVTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAFIEFTEHQHALVALRVLNNNPE 725

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 726  TFGPEHRPI 734


>ref|XP_011047784.1| PREDICTED: RNA-binding protein 28 isoform X4 [Populus euphratica]
          Length = 835

 Score =  616 bits (1588), Expect = e-173
 Identities = 318/489 (65%), Positives = 375/489 (76%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEG KT+KWK+I+RNLPFKAK NEIKD+F SAGFVWDVF+P N+ETGLS+GFAFVKF
Sbjct: 257  QLGGEGCKTQKWKLIIRNLPFKAKPNEIKDVFESAGFVWDVFVPHNSETGLSRGFAFVKF 316

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCKQDAENAIQKFNG+ FGKRPIAVDWAVPKK +++GA+     +DGHQ           
Sbjct: 317  TCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVPAASEDGHQNEKDSSCEDSD 376

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                           K Q+  G  +   ++D  EKE   TE+DF++EAD+ARKVL+NL++
Sbjct: 377  YDDDDNNDTDVIE--KKQRHDGVVIASPDSDLSEKEDTPTEVDFEQEADIARKVLRNLIT 434

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            SS+K   ++  D+  LP   +E   + V +K    S N+ G   P SS KS+P+  K  +
Sbjct: 435  SSSKDSASTNMDDDVLPKGIEELDTVVVPSKLPGESENLSG--SPLSSGKSKPST-KHID 491

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
            GEDDLQRT+FI NLPFD+++ EVKQRFS FGEV SFV VLHQVTKRPRGTGFLKFKT D 
Sbjct: 492  GEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQVTKRPRGTGFLKFKTADG 551

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       +GLGIFL+GRQL VLKALDKKSAHDKE +KTK ED DHRNLYLAKEGLI
Sbjct: 552  ATAAVSAANVASGLGIFLKGRQLAVLKALDKKSAHDKEKEKTKIEDRDHRNLYLAKEGLI 611

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            +EGTPAAEGVS SDM KR  L+ +K TK +SPNFH+SR RL++YN+PKSMTEKQLKK+ I
Sbjct: 612  LEGTPAAEGVSISDMAKRNRLQEEKMTKLKSPNFHVSRTRLVVYNLPKSMTEKQLKKLFI 671

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAVTSRATKQ PVIRQ+KFLK+ KKGK+VT ++SRGVAFVEFTE+QHALVALRVLNNNPE
Sbjct: 672  DAVTSRATKQNPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEYQHALVALRVLNNNPE 731

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 732  TFGPEHRPI 740


>ref|XP_011047777.1| PREDICTED: RNA-binding protein 28 isoform X3 [Populus euphratica]
          Length = 837

 Score =  616 bits (1588), Expect = e-173
 Identities = 318/489 (65%), Positives = 375/489 (76%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEG KT+KWK+I+RNLPFKAK NEIKD+F SAGFVWDVF+P N+ETGLS+GFAFVKF
Sbjct: 259  QLGGEGCKTQKWKLIIRNLPFKAKPNEIKDVFESAGFVWDVFVPHNSETGLSRGFAFVKF 318

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCKQDAENAIQKFNG+ FGKRPIAVDWAVPKK +++GA+     +DGHQ           
Sbjct: 319  TCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVPAASEDGHQNEKDSSCEDSD 378

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                           K Q+  G  +   ++D  EKE   TE+DF++EAD+ARKVL+NL++
Sbjct: 379  YDDDDNNDTDVIE--KKQRHDGVVIASPDSDLSEKEDTPTEVDFEQEADIARKVLRNLIT 436

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            SS+K   ++  D+  LP   +E   + V +K    S N+ G   P SS KS+P+  K  +
Sbjct: 437  SSSKDSASTNMDDDVLPKGIEELDTVVVPSKLPGESENLSG--SPLSSGKSKPST-KHID 493

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
            GEDDLQRT+FI NLPFD+++ EVKQRFS FGEV SFV VLHQVTKRPRGTGFLKFKT D 
Sbjct: 494  GEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQVTKRPRGTGFLKFKTADG 553

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       +GLGIFL+GRQL VLKALDKKSAHDKE +KTK ED DHRNLYLAKEGLI
Sbjct: 554  ATAAVSAANVASGLGIFLKGRQLAVLKALDKKSAHDKEKEKTKIEDRDHRNLYLAKEGLI 613

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            +EGTPAAEGVS SDM KR  L+ +K TK +SPNFH+SR RL++YN+PKSMTEKQLKK+ I
Sbjct: 614  LEGTPAAEGVSISDMAKRNRLQEEKMTKLKSPNFHVSRTRLVVYNLPKSMTEKQLKKLFI 673

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAVTSRATKQ PVIRQ+KFLK+ KKGK+VT ++SRGVAFVEFTE+QHALVALRVLNNNPE
Sbjct: 674  DAVTSRATKQNPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEYQHALVALRVLNNNPE 733

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 734  TFGPEHRPI 742


>ref|XP_011047769.1| PREDICTED: RNA-binding protein 28 isoform X2 [Populus euphratica]
          Length = 842

 Score =  616 bits (1588), Expect = e-173
 Identities = 318/489 (65%), Positives = 375/489 (76%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEG KT+KWK+I+RNLPFKAK NEIKD+F SAGFVWDVF+P N+ETGLS+GFAFVKF
Sbjct: 264  QLGGEGCKTQKWKLIIRNLPFKAKPNEIKDVFESAGFVWDVFVPHNSETGLSRGFAFVKF 323

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCKQDAENAIQKFNG+ FGKRPIAVDWAVPKK +++GA+     +DGHQ           
Sbjct: 324  TCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVPAASEDGHQNEKDSSCEDSD 383

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                           K Q+  G  +   ++D  EKE   TE+DF++EAD+ARKVL+NL++
Sbjct: 384  YDDDDNNDTDVIE--KKQRHDGVVIASPDSDLSEKEDTPTEVDFEQEADIARKVLRNLIT 441

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            SS+K   ++  D+  LP   +E   + V +K    S N+ G   P SS KS+P+  K  +
Sbjct: 442  SSSKDSASTNMDDDVLPKGIEELDTVVVPSKLPGESENLSG--SPLSSGKSKPST-KHID 498

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
            GEDDLQRT+FI NLPFD+++ EVKQRFS FGEV SFV VLHQVTKRPRGTGFLKFKT D 
Sbjct: 499  GEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQVTKRPRGTGFLKFKTADG 558

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       +GLGIFL+GRQL VLKALDKKSAHDKE +KTK ED DHRNLYLAKEGLI
Sbjct: 559  ATAAVSAANVASGLGIFLKGRQLAVLKALDKKSAHDKEKEKTKIEDRDHRNLYLAKEGLI 618

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            +EGTPAAEGVS SDM KR  L+ +K TK +SPNFH+SR RL++YN+PKSMTEKQLKK+ I
Sbjct: 619  LEGTPAAEGVSISDMAKRNRLQEEKMTKLKSPNFHVSRTRLVVYNLPKSMTEKQLKKLFI 678

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAVTSRATKQ PVIRQ+KFLK+ KKGK+VT ++SRGVAFVEFTE+QHALVALRVLNNNPE
Sbjct: 679  DAVTSRATKQNPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEYQHALVALRVLNNNPE 738

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 739  TFGPEHRPI 747


>ref|XP_011047760.1| PREDICTED: RNA-binding protein 28 isoform X1 [Populus euphratica]
          Length = 843

 Score =  616 bits (1588), Expect = e-173
 Identities = 318/489 (65%), Positives = 375/489 (76%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEG KT+KWK+I+RNLPFKAK NEIKD+F SAGFVWDVF+P N+ETGLS+GFAFVKF
Sbjct: 265  QLGGEGCKTQKWKLIIRNLPFKAKPNEIKDVFESAGFVWDVFVPHNSETGLSRGFAFVKF 324

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCKQDAENAIQKFNG+ FGKRPIAVDWAVPKK +++GA+     +DGHQ           
Sbjct: 325  TCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVPAASEDGHQNEKDSSCEDSD 384

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                           K Q+  G  +   ++D  EKE   TE+DF++EAD+ARKVL+NL++
Sbjct: 385  YDDDDNNDTDVIE--KKQRHDGVVIASPDSDLSEKEDTPTEVDFEQEADIARKVLRNLIT 442

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            SS+K   ++  D+  LP   +E   + V +K    S N+ G   P SS KS+P+  K  +
Sbjct: 443  SSSKDSASTNMDDDVLPKGIEELDTVVVPSKLPGESENLSG--SPLSSGKSKPST-KHID 499

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
            GEDDLQRT+FI NLPFD+++ EVKQRFS FGEV SFV VLHQVTKRPRGTGFLKFKT D 
Sbjct: 500  GEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQVTKRPRGTGFLKFKTADG 559

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       +GLGIFL+GRQL VLKALDKKSAHDKE +KTK ED DHRNLYLAKEGLI
Sbjct: 560  ATAAVSAANVASGLGIFLKGRQLAVLKALDKKSAHDKEKEKTKIEDRDHRNLYLAKEGLI 619

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            +EGTPAAEGVS SDM KR  L+ +K TK +SPNFH+SR RL++YN+PKSMTEKQLKK+ I
Sbjct: 620  LEGTPAAEGVSISDMAKRNRLQEEKMTKLKSPNFHVSRTRLVVYNLPKSMTEKQLKKLFI 679

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAVTSRATKQ PVIRQ+KFLK+ KKGK+VT ++SRGVAFVEFTE+QHALVALRVLNNNPE
Sbjct: 680  DAVTSRATKQNPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEYQHALVALRVLNNNPE 739

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 740  TFGPEHRPI 748


>ref|XP_002313773.2| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|550331582|gb|EEE87728.2| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 974

 Score =  608 bits (1568), Expect = e-171
 Identities = 317/492 (64%), Positives = 372/492 (75%), Gaps = 3/492 (0%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEG KT+KWK+I+RNLPFKAK NEIK +F SAG VWDVF+P N+ETGLSKGFAFVKF
Sbjct: 269  QLGGEGCKTQKWKLIIRNLPFKAKPNEIKGVFESAGCVWDVFVPHNSETGLSKGFAFVKF 328

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCKQDAENAIQKFNG+ FGKRPIAVDWAVPKK +++GA+     +DG+            
Sbjct: 329  TCKQDAENAIQKFNGQKFGKRPIAVDWAVPKKIYSSGANVSAASEDGNASAGHQNEKDSS 388

Query: 1108 XXXXXXXXXXXXXXG---KPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKN 938
                              K Q+  G  V   ++D  EKE + TE+DF++EAD+ARKVL+N
Sbjct: 389  CEDSDYDDEDDNDTDVIGKKQQHDGVVVTSPDSDLSEKEDMPTEVDFEQEADIARKVLRN 448

Query: 937  LMSSSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLK 758
            L++SS+            LP   +E + +DV +K    S N+ G   P SS KS+P++ K
Sbjct: 449  LIASSS----------DVLPKGIEELETVDVPSKLPGESENLSG--SPLSSGKSKPSNTK 496

Query: 757  PEEGEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKT 578
              +GEDDLQRT+FI NLPFD+++ EVKQRFS FGEV SFV VLHQVTKRPRGTGFLKFKT
Sbjct: 497  HIDGEDDLQRTVFISNLPFDVESGEVKQRFSAFGEVLSFVPVLHQVTKRPRGTGFLKFKT 556

Query: 577  VDXXXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKE 398
             D            +GLGIFL+GRQL VLKALDKKSAHDKE +KTK ED DHRNLYLAKE
Sbjct: 557  ADGATAAVSAANVASGLGIFLKGRQLTVLKALDKKSAHDKEKEKTKIEDRDHRNLYLAKE 616

Query: 397  GLIVEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKK 218
            GLI+EGTPAAEGVS SDM KR  L+ +K TK +SPNFH+SR RL++YN+PKSMTEKQLKK
Sbjct: 617  GLILEGTPAAEGVSISDMAKRNRLQEEKMTKLRSPNFHVSRTRLVVYNLPKSMTEKQLKK 676

Query: 217  ILIDAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNN 38
            + IDAVTSRATKQKPVIRQ+KFLK+ KKGK+VT ++SRGVAFVEFTEHQHALVALRVLNN
Sbjct: 677  LFIDAVTSRATKQKPVIRQMKFLKNVKKGKVVTKDHSRGVAFVEFTEHQHALVALRVLNN 736

Query: 37   NPETFGPEHRPI 2
            NPETFGPEHRPI
Sbjct: 737  NPETFGPEHRPI 748


>ref|XP_007042088.1| RNA-binding family protein, putative [Theobroma cacao]
            gi|508706023|gb|EOX97919.1| RNA-binding family protein,
            putative [Theobroma cacao]
          Length = 953

 Score =  608 bits (1568), Expect = e-171
 Identities = 323/495 (65%), Positives = 376/495 (75%), Gaps = 6/495 (1%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWKII+RNLP+KAKVNEI+DMFSSAGFVWDVFIP N+ETGLSKGFAFVKF
Sbjct: 250  QLGGEGSKTQKWKIIIRNLPYKAKVNEIRDMFSSAGFVWDVFIPYNSETGLSKGFAFVKF 309

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCKQDAENAIQKFNG+ F KRPIAVDWAVPKK ++ GA+  V   DG Q           
Sbjct: 310  TCKQDAENAIQKFNGQKFAKRPIAVDWAVPKKLYSGGANAAVA-SDGGQLHEGDEESDSS 368

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDE---VPPEETDTIEKEVISTEIDFDEEADVARKVLKN 938
                           + +   GD    +  ++++ ++     T IDFD EAD+ARKVL N
Sbjct: 369  SIDM-----------EDEGGDGDNDGGIASDDSNMLDTARAPTAIDFDMEADIARKVLNN 417

Query: 937  LMSSSAKGKPTSLSDNSPLPMRNKE---DKAIDVHNKTSDGSANVLGITKPGSSSKSEPT 767
            L++SS         D++ LP R+ E   D+ I+V NK+   SA    +TKP  SSK++  
Sbjct: 418  LVTSS--------HDDAVLPKRDDELNVDETINVQNKSLIESAIGSDMTKPEKSSKNKQA 469

Query: 766  DLKPEEGEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLK 587
            ++K  +GEDDLQRTIFI NLPFDID++EVK+RFSGFGEVQ F+ VLH VTKRPRGTGFLK
Sbjct: 470  NIKLTDGEDDLQRTIFISNLPFDIDDKEVKERFSGFGEVQYFLPVLHPVTKRPRGTGFLK 529

Query: 586  FKTVDXXXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYL 407
            FKT+D            +GLGIFL+GRQLKVLKALD+KSAHDKE++K K E+HDHRNLYL
Sbjct: 530  FKTIDAAIAAVSAVNAASGLGIFLKGRQLKVLKALDRKSAHDKELEKAKVEEHDHRNLYL 589

Query: 406  AKEGLIVEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQ 227
            AKEGLIVEGTP A+ VSASDM KR+ML  KK TK QSPNFH+S+ RLIIYN+PKSMTEK+
Sbjct: 590  AKEGLIVEGTPPAKDVSASDMEKRKMLHEKKMTKLQSPNFHVSKTRLIIYNLPKSMTEKE 649

Query: 226  LKKILIDAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRV 47
            LK++ IDAV SRATKQKPVIRQIKFLK  KKGK+V  N SRGVAFVEFTEHQHALVALRV
Sbjct: 650  LKQLCIDAVISRATKQKPVIRQIKFLKSVKKGKLVIKNQSRGVAFVEFTEHQHALVALRV 709

Query: 46   LNNNPETFGPEHRPI 2
            LNNNPETFGPEHRPI
Sbjct: 710  LNNNPETFGPEHRPI 724


>ref|XP_012067208.1| PREDICTED: RNA-binding protein 28 [Jatropha curcas]
            gi|643735107|gb|KDP41748.1| hypothetical protein
            JCGZ_26766 [Jatropha curcas]
          Length = 974

 Score =  603 bits (1554), Expect = e-169
 Identities = 312/492 (63%), Positives = 370/492 (75%), Gaps = 3/492 (0%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSK +KWK+IVRNLPFKAK +EIKD+FSSAGFVWDVFIP N+ETGLSKGFAFVKF
Sbjct: 256  QLGGEGSKIQKWKLIVRNLPFKAKASEIKDVFSSAGFVWDVFIPHNSETGLSKGFAFVKF 315

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCKQ AENAIQKFN +++GKRP+AVDWAVPKK +++GA+  V  +DGHQ           
Sbjct: 316  TCKQHAENAIQKFNAQMYGKRPMAVDWAVPKKIYSSGANLSVASEDGHQSESDSDISSDD 375

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGD-EVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLM 932
                           +  K H +  V P+ +D  EK+ + TE+DFD EAD+ARKVL+ LM
Sbjct: 376  LEEEQDDDGNIDD--RKSKQHDEVNVAPDNSDLFEKKHMPTEVDFDAEADIARKVLQTLM 433

Query: 931  SSSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPE 752
            +SS+K    S  D+S LP  NK D+ +DV +K S+   N  G   PG S KS   D+K  
Sbjct: 434  NSSSKASAPSDVDDSILPKGNKTDETVDVPSKKSNKHENFSGAFLPGDSGKSSAADVKKT 493

Query: 751  EGEDD-LQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTV 575
            + EDD LQRT+FI N+PF+IDNEEVKQRFS FG+V+SFV VLHQVTKRPRGTGFLKF+T 
Sbjct: 494  DTEDDDLQRTVFISNIPFEIDNEEVKQRFSAFGKVKSFVPVLHQVTKRPRGTGFLKFETE 553

Query: 574  DXXXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKED-HDHRNLYLAKE 398
            D            +GLGI L+GRQLKVLKALDKK+A DKE +K K  D  DHRNLYLAKE
Sbjct: 554  DAATAAVSAANIASGLGILLKGRQLKVLKALDKKAARDKETEKAKIVDSQDHRNLYLAKE 613

Query: 397  GLIVEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKK 218
            GLI+EGTPA+EG+SASDM KR+ L  KK  K +SPNFH+SR RL+IYN+P S+ EK+LKK
Sbjct: 614  GLILEGTPASEGISASDMAKRKALHEKKMIKLRSPNFHVSRTRLVIYNLPHSVNEKKLKK 673

Query: 217  ILIDAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNN 38
            + I+AV SRATKQ PVIRQIK LK  K GK+VT N+SRGVAF+EFTEHQHALVALRVLNN
Sbjct: 674  LCINAVISRATKQNPVIRQIKLLKSVKNGKVVTKNHSRGVAFIEFTEHQHALVALRVLNN 733

Query: 37   NPETFGPEHRPI 2
            NP+TFGPEHRPI
Sbjct: 734  NPDTFGPEHRPI 745


>ref|XP_010107840.1| RNA-binding protein 28 [Morus notabilis] gi|587930111|gb|EXC17240.1|
            RNA-binding protein 28 [Morus notabilis]
          Length = 858

 Score =  601 bits (1549), Expect = e-169
 Identities = 309/492 (62%), Positives = 367/492 (74%), Gaps = 3/492 (0%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWK+IVRNLPFKAKV EIKDMFSSAGFVWDVFIP N++TG+SKGFAF+KF
Sbjct: 150  QLGGEGSKTQKWKLIVRNLPFKAKVTEIKDMFSSAGFVWDVFIPHNSDTGISKGFAFIKF 209

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            T K DAENAIQKFNG+ FGKRPIAVDWAVPKK +    +  +  ++G             
Sbjct: 210  TSKSDAENAIQKFNGQTFGKRPIAVDWAVPKKIYTRCNNASLTPENGEGDETDGETESDT 269

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                           +P      +   +  +T EKE    E++FDEE D+ARKVLKNL+ 
Sbjct: 270  DVSSDDFEELNKKSKQPDSV---DSASDYCNTTEKEDKPVEVNFDEEVDIARKVLKNLIG 326

Query: 928  SSAKGKPTSLSDNSPLPMRNKE---DKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLK 758
            SS+KG PTS  D+S LP RN E   D+++D+ NK SD SA    +++PG   K E   LK
Sbjct: 327  SSSKGTPTSCDDDSVLPKRNMEPNMDESVDMPNKVSDESAKASAVSRPGMPDKEELKSLK 386

Query: 757  PEEGEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKT 578
              E ++ L+RTIFI NLPF+I+NEEV+QRFS FGEVQSFV V H VT+RP+GTGFL FKT
Sbjct: 387  EIEEKEKLRRTIFIGNLPFEINNEEVEQRFSTFGEVQSFVLVRHPVTRRPKGTGFLMFKT 446

Query: 577  VDXXXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKE 398
             D            +G+GIFL+ R+L VL+ALDKK+AH+KE++K K EDHDHRNLYLAKE
Sbjct: 447  TDAATAAISAANVASGVGIFLKDRKLIVLEALDKKAAHNKEIEKAKNEDHDHRNLYLAKE 506

Query: 397  GLIVEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKK 218
            GLI EGT AAEGVSASDMLKR+MLER K TK QSPNFH+S+ RL+IYN+PKSM EK+LKK
Sbjct: 507  GLIFEGTAAAEGVSASDMLKRRMLERNKTTKLQSPNFHVSKTRLVIYNLPKSMNEKELKK 566

Query: 217  ILIDAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNN 38
            + IDAV SR TKQ P+IRQIKFLKD KKGK+VT N+SRGVAFVEF+EH+HALVALRVLNN
Sbjct: 567  LCIDAVRSRVTKQTPMIRQIKFLKDMKKGKVVTENHSRGVAFVEFSEHEHALVALRVLNN 626

Query: 37   NPETFGPEHRPI 2
            NP TFG EHRPI
Sbjct: 627  NPATFGHEHRPI 638


>ref|XP_010254679.1| PREDICTED: RNA-binding protein 28 isoform X3 [Nelumbo nucifera]
            gi|719995991|ref|XP_010254680.1| PREDICTED: RNA-binding
            protein 28 isoform X3 [Nelumbo nucifera]
            gi|719995993|ref|XP_010254681.1| PREDICTED: RNA-binding
            protein 28 isoform X3 [Nelumbo nucifera]
            gi|719995996|ref|XP_010254682.1| PREDICTED: RNA-binding
            protein 28 isoform X3 [Nelumbo nucifera]
          Length = 773

 Score =  600 bits (1548), Expect = e-169
 Identities = 318/489 (65%), Positives = 366/489 (74%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKTRKW++IVRNLPFKAKVNEIKD+F+SAGFVWDVF+P N++TGLSKGFAFV F
Sbjct: 73   QLGGEGSKTRKWRLIVRNLPFKAKVNEIKDLFASAGFVWDVFVPLNSKTGLSKGFAFVSF 132

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCKQDAENAI+K NG++  KRPIAVDWAVPKK + TG + V    DG +           
Sbjct: 133  TCKQDAENAIKKVNGQMISKRPIAVDWAVPKKIYTTGGNLVETQTDGAENDRHDESDNSS 192

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                             Q+   +EV  E +D I+ EV S E+DFDEEA + +KVL NL++
Sbjct: 193  IDMEGDYAGSDKDS---QQVDAEEVQ-EGSDHIDNEVHSKELDFDEEAGIVKKVLNNLIT 248

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            SSA         NS LP  N  + AID  NK S    + L +  P  SSK E   L   +
Sbjct: 249  SSASAT-LPFGGNSRLPQGN--ETAIDAKNKLSIQEKS-LDVALPPKSSKVETVALGRVD 304

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
             EDDLQRTIFI NLPFD+D E+VK+RFS FGEV+SFV VLHQVTKRPRGTGFL+F T   
Sbjct: 305  SEDDLQRTIFISNLPFDVDIEDVKKRFSAFGEVKSFVPVLHQVTKRPRGTGFLRFNTTSA 364

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       +GLGI L GRQL VLKALDKKSAH KE++KTK EDHDHRNLYLAKEGLI
Sbjct: 365  AEAAVLAANATSGLGIVLNGRQLTVLKALDKKSAHKKELEKTKNEDHDHRNLYLAKEGLI 424

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            +EGT AAEGVSASDMLKRQML +KK +K +SPNFH+SR RLI+YN+PKSMTEK+LKK+ I
Sbjct: 425  LEGTSAAEGVSASDMLKRQMLYKKKMSKLESPNFHVSRTRLIVYNLPKSMTEKELKKLFI 484

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAV SRA+KQKPVIRQIKFL+DSKKGK+V+ NYSRGVAFVEFTEHQHA+VALRVLNNNPE
Sbjct: 485  DAVLSRASKQKPVIRQIKFLEDSKKGKVVSKNYSRGVAFVEFTEHQHAIVALRVLNNNPE 544

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 545  TFGPEHRPI 553


>ref|XP_010254678.1| PREDICTED: RNA-binding protein 28 isoform X2 [Nelumbo nucifera]
          Length = 957

 Score =  600 bits (1548), Expect = e-169
 Identities = 318/489 (65%), Positives = 366/489 (74%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKTRKW++IVRNLPFKAKVNEIKD+F+SAGFVWDVF+P N++TGLSKGFAFV F
Sbjct: 257  QLGGEGSKTRKWRLIVRNLPFKAKVNEIKDLFASAGFVWDVFVPLNSKTGLSKGFAFVSF 316

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCKQDAENAI+K NG++  KRPIAVDWAVPKK + TG + V    DG +           
Sbjct: 317  TCKQDAENAIKKVNGQMISKRPIAVDWAVPKKIYTTGGNLVETQTDGAENDRHDESDNSS 376

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                             Q+   +EV  E +D I+ EV S E+DFDEEA + +KVL NL++
Sbjct: 377  IDMEGDYAGSDKDS---QQVDAEEVQ-EGSDHIDNEVHSKELDFDEEAGIVKKVLNNLIT 432

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            SSA         NS LP  N  + AID  NK S    + L +  P  SSK E   L   +
Sbjct: 433  SSASAT-LPFGGNSRLPQGN--ETAIDAKNKLSIQEKS-LDVALPPKSSKVETVALGRVD 488

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
             EDDLQRTIFI NLPFD+D E+VK+RFS FGEV+SFV VLHQVTKRPRGTGFL+F T   
Sbjct: 489  SEDDLQRTIFISNLPFDVDIEDVKKRFSAFGEVKSFVPVLHQVTKRPRGTGFLRFNTTSA 548

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       +GLGI L GRQL VLKALDKKSAH KE++KTK EDHDHRNLYLAKEGLI
Sbjct: 549  AEAAVLAANATSGLGIVLNGRQLTVLKALDKKSAHKKELEKTKNEDHDHRNLYLAKEGLI 608

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            +EGT AAEGVSASDMLKRQML +KK +K +SPNFH+SR RLI+YN+PKSMTEK+LKK+ I
Sbjct: 609  LEGTSAAEGVSASDMLKRQMLYKKKMSKLESPNFHVSRTRLIVYNLPKSMTEKELKKLFI 668

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAV SRA+KQKPVIRQIKFL+DSKKGK+V+ NYSRGVAFVEFTEHQHA+VALRVLNNNPE
Sbjct: 669  DAVLSRASKQKPVIRQIKFLEDSKKGKVVSKNYSRGVAFVEFTEHQHAIVALRVLNNNPE 728

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 729  TFGPEHRPI 737


>ref|XP_010254677.1| PREDICTED: RNA-binding protein 28 isoform X1 [Nelumbo nucifera]
          Length = 961

 Score =  600 bits (1548), Expect = e-169
 Identities = 318/489 (65%), Positives = 366/489 (74%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKTRKW++IVRNLPFKAKVNEIKD+F+SAGFVWDVF+P N++TGLSKGFAFV F
Sbjct: 261  QLGGEGSKTRKWRLIVRNLPFKAKVNEIKDLFASAGFVWDVFVPLNSKTGLSKGFAFVSF 320

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCKQDAENAI+K NG++  KRPIAVDWAVPKK + TG + V    DG +           
Sbjct: 321  TCKQDAENAIKKVNGQMISKRPIAVDWAVPKKIYTTGGNLVETQTDGAENDRHDESDNSS 380

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                             Q+   +EV  E +D I+ EV S E+DFDEEA + +KVL NL++
Sbjct: 381  IDMEGDYAGSDKDS---QQVDAEEVQ-EGSDHIDNEVHSKELDFDEEAGIVKKVLNNLIT 436

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            SSA         NS LP  N  + AID  NK S    + L +  P  SSK E   L   +
Sbjct: 437  SSASAT-LPFGGNSRLPQGN--ETAIDAKNKLSIQEKS-LDVALPPKSSKVETVALGRVD 492

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
             EDDLQRTIFI NLPFD+D E+VK+RFS FGEV+SFV VLHQVTKRPRGTGFL+F T   
Sbjct: 493  SEDDLQRTIFISNLPFDVDIEDVKKRFSAFGEVKSFVPVLHQVTKRPRGTGFLRFNTTSA 552

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       +GLGI L GRQL VLKALDKKSAH KE++KTK EDHDHRNLYLAKEGLI
Sbjct: 553  AEAAVLAANATSGLGIVLNGRQLTVLKALDKKSAHKKELEKTKNEDHDHRNLYLAKEGLI 612

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            +EGT AAEGVSASDMLKRQML +KK +K +SPNFH+SR RLI+YN+PKSMTEK+LKK+ I
Sbjct: 613  LEGTSAAEGVSASDMLKRQMLYKKKMSKLESPNFHVSRTRLIVYNLPKSMTEKELKKLFI 672

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAV SRA+KQKPVIRQIKFL+DSKKGK+V+ NYSRGVAFVEFTEHQHA+VALRVLNNNPE
Sbjct: 673  DAVLSRASKQKPVIRQIKFLEDSKKGKVVSKNYSRGVAFVEFTEHQHAIVALRVLNNNPE 732

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 733  TFGPEHRPI 741


>ref|XP_006487347.1| PREDICTED: RNA-binding protein 28-like isoform X4 [Citrus sinensis]
          Length = 819

 Score =  596 bits (1537), Expect = e-167
 Identities = 315/489 (64%), Positives = 366/489 (74%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWK+IVRN+PFKAKVNEIKDMFS  G VW+V+IP NT+TGLSKGFAFVKF
Sbjct: 135  QLGGEGSKTQKWKLIVRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 194

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCK+DAE+AIQKFNG+ FGKRPIAVDWAVPK  +++G       +DG Q           
Sbjct: 195  TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGAYEDGVQNKGDGNSDSGS 254

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                                   E   +++++ EKE + +  DFDEE D+ARKVL  L S
Sbjct: 255  DDDLGDDDA--------------ETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTS 300

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            ++  G   SLSD+S L   NKE  +    +KT + SA V  ++K  +SSKS+P  LK  E
Sbjct: 301  TT--GSLPSLSDDSALVKGNKEQDS----DKTVNESAKVSDVSKL-NSSKSKPKSLKQTE 353

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
            GED+LQ TIFI NLPFD+DNEEVKQRFS FGEV SFV VLHQVTKRP+GTGFLKFKTV+ 
Sbjct: 354  GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 413

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       +GLGIFL+GRQL VLKALDKK AHDKE+DK+K E +DHRNLYLAKEGLI
Sbjct: 414  ATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLI 473

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            +EGTPAAEGVS  DM KRQML  KK TK QSPNFH+SR RL+IYN+PKSMTEK LKK+ I
Sbjct: 474  LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI 533

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAV SRA+KQKPVI+QIKFL+  KKGK+ T +YSRGVAFVEFTEHQHALVALRVLNNNP+
Sbjct: 534  DAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPK 593

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 594  TFGPEHRPI 602


>ref|XP_006487344.1| PREDICTED: RNA-binding protein 28-like isoform X1 [Citrus sinensis]
            gi|568868077|ref|XP_006487345.1| PREDICTED: RNA-binding
            protein 28-like isoform X2 [Citrus sinensis]
          Length = 938

 Score =  596 bits (1537), Expect = e-167
 Identities = 315/489 (64%), Positives = 366/489 (74%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWK+IVRN+PFKAKVNEIKDMFS  G VW+V+IP NT+TGLSKGFAFVKF
Sbjct: 254  QLGGEGSKTQKWKLIVRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 313

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCK+DAE+AIQKFNG+ FGKRPIAVDWAVPK  +++G       +DG Q           
Sbjct: 314  TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGAYEDGVQNKGDGNSDSGS 373

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                                   E   +++++ EKE + +  DFDEE D+ARKVL  L S
Sbjct: 374  DDDLGDDDA--------------ETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTS 419

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            ++  G   SLSD+S L   NKE  +    +KT + SA V  ++K  +SSKS+P  LK  E
Sbjct: 420  TT--GSLPSLSDDSALVKGNKEQDS----DKTVNESAKVSDVSKL-NSSKSKPKSLKQTE 472

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
            GED+LQ TIFI NLPFD+DNEEVKQRFS FGEV SFV VLHQVTKRP+GTGFLKFKTV+ 
Sbjct: 473  GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 532

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       +GLGIFL+GRQL VLKALDKK AHDKE+DK+K E +DHRNLYLAKEGLI
Sbjct: 533  ATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLI 592

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            +EGTPAAEGVS  DM KRQML  KK TK QSPNFH+SR RL+IYN+PKSMTEK LKK+ I
Sbjct: 593  LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI 652

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAV SRA+KQKPVI+QIKFL+  KKGK+ T +YSRGVAFVEFTEHQHALVALRVLNNNP+
Sbjct: 653  DAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPK 712

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 713  TFGPEHRPI 721


>gb|KDO49468.1| hypothetical protein CISIN_1g0027092mg [Citrus sinensis]
          Length = 890

 Score =  596 bits (1536), Expect = e-167
 Identities = 314/489 (64%), Positives = 366/489 (74%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWK+I+RN+PFKAKVNEIKDMFS  G VW+V+IP NT+TGLSKGFAFVKF
Sbjct: 206  QLGGEGSKTQKWKLIIRNIPFKAKVNEIKDMFSPVGLVWNVYIPHNTDTGLSKGFAFVKF 265

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            TCK+DAE+AIQKFNG+ FGKRPIAVDWAVPK  +++G       +DG Q           
Sbjct: 266  TCKRDAESAIQKFNGQKFGKRPIAVDWAVPKNIYSSGGAAAGAYEDGVQNKGDGNSDSGS 325

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                                   E   +++++ EKE + +  DFDEE D+ARKVL  L S
Sbjct: 326  DDDLGDDDA--------------ETASDDSNSSEKEDLPSNADFDEEVDIARKVLNKLTS 371

Query: 928  SSAKGKPTSLSDNSPLPMRNKEDKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLKPEE 749
            ++  G   SLSD+S L   NKE  +    +KT + SA V  ++K  +SSKS+P  LK  E
Sbjct: 372  TT--GSLPSLSDDSALVKGNKEQDS----DKTVNESAKVSDVSKL-NSSKSKPKSLKQTE 424

Query: 748  GEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKTVDX 569
            GED+LQ TIFI NLPFD+DNEEVKQRFS FGEV SFV VLHQVTKRP+GTGFLKFKTV+ 
Sbjct: 425  GEDELQNTIFICNLPFDLDNEEVKQRFSAFGEVVSFVPVLHQVTKRPKGTGFLKFKTVEA 484

Query: 568  XXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKEGLI 389
                       +GLGIFL+GRQL VLKALDKK AHDKE+DK+K E +DHRNLYLAKEGLI
Sbjct: 485  ATAAVSASKTTSGLGIFLKGRQLTVLKALDKKLAHDKEIDKSKNETNDHRNLYLAKEGLI 544

Query: 388  VEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKKILI 209
            +EGTPAAEGVS  DM KRQML  KK TK QSPNFH+SR RL+IYN+PKSMTEK LKK+ I
Sbjct: 545  LEGTPAAEGVSDDDMSKRQMLHEKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKGLKKLCI 604

Query: 208  DAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNNNPE 29
            DAV SRA+KQKPVI+QIKFL+  KKGK+ T +YSRGVAFVEFTEHQHALVALRVLNNNP+
Sbjct: 605  DAVVSRASKQKPVIKQIKFLQSLKKGKVDTKHYSRGVAFVEFTEHQHALVALRVLNNNPK 664

Query: 28   TFGPEHRPI 2
            TFGPEHRPI
Sbjct: 665  TFGPEHRPI 673


>gb|KJB79122.1| hypothetical protein B456_013G034200 [Gossypium raimondii]
          Length = 952

 Score =  591 bits (1524), Expect = e-166
 Identities = 314/492 (63%), Positives = 363/492 (73%), Gaps = 3/492 (0%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWK+I+RNL FKAK++EIKDMFS+AGFVWDVFIP N+ETGLSKGFAFVKF
Sbjct: 247  QLGGEGSKTQKWKLIIRNLSFKAKLSEIKDMFSAAGFVWDVFIPHNSETGLSKGFAFVKF 306

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            T KQDAENAIQKFNGK   KRPIAVDWAVPKK ++ G +T V   DG             
Sbjct: 307  TSKQDAENAIQKFNGKTLCKRPIAVDWAVPKKLYSAGGNTAVTSDDGQ-------LNNKE 359

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                          G       D +   +++  E E  ST +DFD+E D+ARKVL NL++
Sbjct: 360  EESDGSSIDMEDEGGDSDNDSDDGIASNDSNMSEMERTSTAVDFDKEVDIARKVLNNLVT 419

Query: 928  SSAKGKPTSLSDNSPLPMRNKE---DKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLK 758
            SS+K    SL D+  LP        D+ I+V NK    SA    ++KP  S  ++  D  
Sbjct: 420  SSSKDS-LSLQDHGVLPKSEDNTNVDETINVQNKLPIESAIGSDVSKPEKSGTNKQID-- 476

Query: 757  PEEGEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKT 578
                E++LQRT+FI NLPFDIDN+EVK+RFSGFGEVQSF+ VLH VTKRPRGTGFLKFKT
Sbjct: 477  ---SEEELQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFKT 533

Query: 577  VDXXXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKE 398
            +D            +GLGIFL+GRQ+KVLKALD+KSAHDKE++K K E+HD RNLYLAKE
Sbjct: 534  IDAATAAVSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAKE 593

Query: 397  GLIVEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKK 218
            GLIVEGTPAA+ VSASDM KRQML  KK TK QSPNFH+S+ RL+IYN+PKSMTE +LK+
Sbjct: 594  GLIVEGTPAAKDVSASDMEKRQMLHEKKMTKLQSPNFHVSKTRLVIYNLPKSMTENELKQ 653

Query: 217  ILIDAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNN 38
            + IDAVTSRATKQKPVIRQIKFLK  KKGKIV  N SRGVAFVEFTEHQHALVALRVLNN
Sbjct: 654  LCIDAVTSRATKQKPVIRQIKFLKTVKKGKIVVKNQSRGVAFVEFTEHQHALVALRVLNN 713

Query: 37   NPETFGPEHRPI 2
            NPETFG EHRPI
Sbjct: 714  NPETFGSEHRPI 725


>ref|XP_012463899.1| PREDICTED: RNA-binding protein 28 [Gossypium raimondii]
            gi|763812268|gb|KJB79120.1| hypothetical protein
            B456_013G034200 [Gossypium raimondii]
          Length = 956

 Score =  591 bits (1524), Expect = e-166
 Identities = 314/492 (63%), Positives = 363/492 (73%), Gaps = 3/492 (0%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWK+I+RNL FKAK++EIKDMFS+AGFVWDVFIP N+ETGLSKGFAFVKF
Sbjct: 251  QLGGEGSKTQKWKLIIRNLSFKAKLSEIKDMFSAAGFVWDVFIPHNSETGLSKGFAFVKF 310

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            T KQDAENAIQKFNGK   KRPIAVDWAVPKK ++ G +T V   DG             
Sbjct: 311  TSKQDAENAIQKFNGKTLCKRPIAVDWAVPKKLYSAGGNTAVTSDDGQ-------LNNKE 363

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                          G       D +   +++  E E  ST +DFD+E D+ARKVL NL++
Sbjct: 364  EESDGSSIDMEDEGGDSDNDSDDGIASNDSNMSEMERTSTAVDFDKEVDIARKVLNNLVT 423

Query: 928  SSAKGKPTSLSDNSPLPMRNKE---DKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLK 758
            SS+K    SL D+  LP        D+ I+V NK    SA    ++KP  S  ++  D  
Sbjct: 424  SSSKDS-LSLQDHGVLPKSEDNTNVDETINVQNKLPIESAIGSDVSKPEKSGTNKQID-- 480

Query: 757  PEEGEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKT 578
                E++LQRT+FI NLPFDIDN+EVK+RFSGFGEVQSF+ VLH VTKRPRGTGFLKFKT
Sbjct: 481  ---SEEELQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFKT 537

Query: 577  VDXXXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKE 398
            +D            +GLGIFL+GRQ+KVLKALD+KSAHDKE++K K E+HD RNLYLAKE
Sbjct: 538  IDAATAAVSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAKE 597

Query: 397  GLIVEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKK 218
            GLIVEGTPAA+ VSASDM KRQML  KK TK QSPNFH+S+ RL+IYN+PKSMTE +LK+
Sbjct: 598  GLIVEGTPAAKDVSASDMEKRQMLHEKKMTKLQSPNFHVSKTRLVIYNLPKSMTENELKQ 657

Query: 217  ILIDAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNN 38
            + IDAVTSRATKQKPVIRQIKFLK  KKGKIV  N SRGVAFVEFTEHQHALVALRVLNN
Sbjct: 658  LCIDAVTSRATKQKPVIRQIKFLKTVKKGKIVVKNQSRGVAFVEFTEHQHALVALRVLNN 717

Query: 37   NPETFGPEHRPI 2
            NPETFG EHRPI
Sbjct: 718  NPETFGSEHRPI 729


>gb|KHG15251.1| RNA-binding 28 [Gossypium arboreum]
          Length = 956

 Score =  591 bits (1523), Expect = e-166
 Identities = 314/492 (63%), Positives = 359/492 (72%), Gaps = 3/492 (0%)
 Frame = -3

Query: 1468 QLGGEGSKTRKWKIIVRNLPFKAKVNEIKDMFSSAGFVWDVFIPQNTETGLSKGFAFVKF 1289
            QLGGEGSKT+KWK+I+RNL FKAK++EIKDMFS+AGFVWDVFIP N+ETGLSKGFAFVKF
Sbjct: 251  QLGGEGSKTQKWKLIIRNLSFKAKLSEIKDMFSAAGFVWDVFIPHNSETGLSKGFAFVKF 310

Query: 1288 TCKQDAENAIQKFNGKIFGKRPIAVDWAVPKKFFATGAHTVVPLKDGHQXXXXXXXXXXX 1109
            T KQDAENAIQKFNGK   KRPIAVDWAVPKK +  G +T V   DG             
Sbjct: 311  TSKQDAENAIQKFNGKTLCKRPIAVDWAVPKKLYGAGGNTAVTSDDGQLNKKDEESDGSS 370

Query: 1108 XXXXXXXXXXXXXXGKPQKFHGDEVPPEETDTIEKEVISTEIDFDEEADVARKVLKNLMS 929
                                  D +   +++  E E  ST +DFD+E D+ARKVL NL+ 
Sbjct: 371  IDMEDEGGDSDNDID-------DGIASNDSNKSEMERTSTAVDFDKEVDIARKVLNNLVM 423

Query: 928  SSAKGKPTSLSDNSPLPMRNKE---DKAIDVHNKTSDGSANVLGITKPGSSSKSEPTDLK 758
            SS+K  P SL DN  LP        D+ I+V NK    SA    + KP  S  ++  D  
Sbjct: 424  SSSKDSP-SLQDNGVLPKSEDNTNVDETINVQNKLPVESAIGSDVIKPEKSGTNKQID-- 480

Query: 757  PEEGEDDLQRTIFIRNLPFDIDNEEVKQRFSGFGEVQSFVSVLHQVTKRPRGTGFLKFKT 578
                E++LQRT+FI NLPFDIDN+EVK+RFSGFGEVQSF+ VLH VTKRPRGTGFLKFKT
Sbjct: 481  ---SEEELQRTVFISNLPFDIDNKEVKERFSGFGEVQSFIPVLHPVTKRPRGTGFLKFKT 537

Query: 577  VDXXXXXXXXXXXXAGLGIFLRGRQLKVLKALDKKSAHDKEVDKTKKEDHDHRNLYLAKE 398
            +D            +GLGIFL+GRQ+KVLKALD+KSAHDKE++K K E+HD RNLYLAKE
Sbjct: 538  IDAATAAVSAANASSGLGIFLKGRQIKVLKALDRKSAHDKELEKAKAEEHDLRNLYLAKE 597

Query: 397  GLIVEGTPAAEGVSASDMLKRQMLERKKATKFQSPNFHISRIRLIIYNIPKSMTEKQLKK 218
            GLIVEGT AA+ VSASDM KRQML  KK TK QSPNFH+S+ RL+IYN+PKSMTE +LK+
Sbjct: 598  GLIVEGTSAAKDVSASDMEKRQMLHEKKMTKLQSPNFHVSKTRLVIYNLPKSMTENELKQ 657

Query: 217  ILIDAVTSRATKQKPVIRQIKFLKDSKKGKIVTNNYSRGVAFVEFTEHQHALVALRVLNN 38
            + IDAVTSRATKQKPVIRQIKFLK  KKGKIV  N SRGVAFVEFTEHQHALVALRVLNN
Sbjct: 658  LCIDAVTSRATKQKPVIRQIKFLKTVKKGKIVVKNQSRGVAFVEFTEHQHALVALRVLNN 717

Query: 37   NPETFGPEHRPI 2
            NPETFG EHRPI
Sbjct: 718  NPETFGSEHRPI 729