BLASTX nr result
ID: Cornus23_contig00023456
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00023456
(291 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003287730.1| 40S ribosomal protein S2 [Dictyostelium purp... 164 3e-38
ref|XP_628967.1| ribosomal protein S2 [Dictyostelium discoideum ... 163 5e-38
gb|ACJ72053.1| ribosomal protein S2 [Carybdea marsupialis] 162 7e-38
ref|XP_009045432.1| hypothetical protein LOTGIDRAFT_212139 [Lott... 161 2e-37
emb|CCQ18617.1| 40S ribosomal protein S2/30S [Sycon ciliatum] 160 3e-37
gb|AAX48877.1| S2 [Suberites domuncula] 160 4e-37
gb|AER35085.1| ribosomal protein S2 [Dictyostelium lacteum] 160 4e-37
ref|XP_013748812.1| PREDICTED: 40S ribosomal protein S2-2 [Brass... 159 6e-37
ref|XP_009102893.1| PREDICTED: 40S ribosomal protein S2-2 [Brass... 159 6e-37
gb|ABB29648.1| ribosomal protein 2 small subunit, partial [Suber... 159 6e-37
ref|XP_013672274.1| PREDICTED: 40S ribosomal protein S2-2-like [... 159 8e-37
ref|XP_013747801.1| PREDICTED: 40S ribosomal protein S2-3 [Brass... 159 8e-37
ref|XP_013734456.1| PREDICTED: 40S ribosomal protein S2-2-like [... 159 8e-37
ref|XP_013636584.1| PREDICTED: 40S ribosomal protein S2-2-like [... 159 8e-37
ref|XP_013630038.1| PREDICTED: 40S ribosomal protein S2-2-like [... 159 8e-37
ref|XP_013605717.1| PREDICTED: 40S ribosomal protein S2-2 [Brass... 159 8e-37
ref|XP_012756392.1| hypothetical protein SAMD00019534_028050 [Ac... 159 8e-37
ref|XP_009133513.1| PREDICTED: 40S ribosomal protein S2-2-like [... 159 8e-37
ref|XP_013636095.1| PREDICTED: 40S ribosomal protein S2-3-like [... 159 8e-37
emb|CDY06903.1| BnaA04g24120D [Brassica napus] 159 8e-37
>ref|XP_003287730.1| 40S ribosomal protein S2 [Dictyostelium purpureum]
gi|325082239|gb|EGC35727.1| 40S ribosomal protein S2
[Dictyostelium purpureum]
Length = 260
Score = 164 bits (414), Expect = 3e-38
Identities = 78/94 (82%), Positives = 84/94 (89%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKC+KEVATAI G I+AAKLS++PVR GYWGNKIGAPHTVPTKVTGKCGSV VR
Sbjct: 117 GHVGLGVKCAKEVATAISGAIVAAKLSVIPVRRGYWGNKIGAPHTVPTKVTGKCGSVAVR 176
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
LVPAPRGTGIVAA P KLL +AGVDDVYT +G
Sbjct: 177 LVPAPRGTGIVAARVPKKLLQYAGVDDVYTSSRG 210
>ref|XP_628967.1| ribosomal protein S2 [Dictyostelium discoideum AX4]
gi|133951|sp|P27685.1|RS2_DICDI RecName: Full=40S
ribosomal protein S2; AltName: Full=Protein LLRep3;
AltName: Full=Ribosomal protein S4
gi|7299|emb|CAA39744.1| DdLLRep3 [Dictyostelium
discoideum] gi|60462326|gb|EAL60548.1| ribosomal protein
S2 [Dictyostelium discoideum AX4]
Length = 265
Score = 163 bits (412), Expect = 5e-38
Identities = 77/94 (81%), Positives = 84/94 (89%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKC+KEVATAI G I+AAKLS++PVR GYWGNK+GAPHTVPTKVTGKCGSV VR
Sbjct: 122 GHVGLGVKCAKEVATAISGAIVAAKLSVIPVRRGYWGNKLGAPHTVPTKVTGKCGSVAVR 181
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
LVPAPRGTGIVAA P KLL +AGVDDVYT +G
Sbjct: 182 LVPAPRGTGIVAARVPKKLLQYAGVDDVYTSSRG 215
>gb|ACJ72053.1| ribosomal protein S2 [Carybdea marsupialis]
Length = 116
Score = 162 bits (411), Expect = 7e-38
Identities = 78/94 (82%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRG IIAAKLS++PVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 23 GHVGLGVKCSKEVATAIRGAIIAAKLSIIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 82
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
L+PAPRGTGIVAAG P KLL AGVDD YT +G
Sbjct: 83 LIPAPRGTGIVAAGVPKKLLQMAGVDDCYTCARG 116
>ref|XP_009045432.1| hypothetical protein LOTGIDRAFT_212139 [Lottia gigantea]
gi|556115298|gb|ESP03950.1| hypothetical protein
LOTGIDRAFT_212139 [Lottia gigantea]
Length = 280
Score = 161 bits (408), Expect = 2e-37
Identities = 74/94 (78%), Positives = 84/94 (89%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRG IIAAKLS+VP+R GYWGNKIG PHTVP+K+TG+CGSV VR
Sbjct: 125 GHVGLGVKCSKEVATAIRGAIIAAKLSIVPIRRGYWGNKIGKPHTVPSKLTGRCGSVLVR 184
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
L+PAPRGTGIV+A P KLL+ AG+DD YT C+G
Sbjct: 185 LIPAPRGTGIVSAPVPRKLLTMAGIDDCYTSCKG 218
>emb|CCQ18617.1| 40S ribosomal protein S2/30S [Sycon ciliatum]
Length = 272
Score = 160 bits (405), Expect = 3e-37
Identities = 76/94 (80%), Positives = 80/94 (85%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRG II AKLS+VPVR GYWGNKIG PHTVP KVTGKCGS RVR
Sbjct: 122 GHVGLGVKCSKEVATAIRGAIINAKLSVVPVRRGYWGNKIGTPHTVPCKVTGKCGSTRVR 181
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
L+PAPRGTG+VAAG P KLL AG+DD YT G
Sbjct: 182 LIPAPRGTGLVAAGVPKKLLMMAGIDDCYTSATG 215
>gb|AAX48877.1| S2 [Suberites domuncula]
Length = 273
Score = 160 bits (404), Expect = 4e-37
Identities = 76/94 (80%), Positives = 81/94 (86%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRG II AKLS++PVRLGYWGNK+GAPHTVP KVTGKCGSV VR
Sbjct: 119 GHVGLGVKCSKEVATAIRGAIILAKLSVIPVRLGYWGNKLGAPHTVPCKVTGKCGSVLVR 178
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
L+PAPRGT IVAAG P KLL AGV D YT +G
Sbjct: 179 LIPAPRGTSIVAAGVPKKLLQMAGVSDCYTSARG 212
>gb|AER35085.1| ribosomal protein S2 [Dictyostelium lacteum]
Length = 275
Score = 160 bits (404), Expect = 4e-37
Identities = 76/94 (80%), Positives = 83/94 (88%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKC+KEVATAI G +AAKLS+VPVR GYWGNKIGAPHTVPTKVTGKCGSV VR
Sbjct: 131 GHVGLGVKCAKEVATAISGAQVAAKLSVVPVRRGYWGNKIGAPHTVPTKVTGKCGSVSVR 190
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
LVPAPRGTGIVAA P K+L FAG++DVYT +G
Sbjct: 191 LVPAPRGTGIVAARVPKKILQFAGIEDVYTSSRG 224
>ref|XP_013748812.1| PREDICTED: 40S ribosomal protein S2-2 [Brassica napus]
Length = 276
Score = 159 bits (403), Expect = 6e-37
Identities = 76/94 (80%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS+VPVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 120 GHVGLGVKCSKEVATAIRGGIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 179
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 180 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 213
>ref|XP_009102893.1| PREDICTED: 40S ribosomal protein S2-2 [Brassica rapa]
gi|674888103|emb|CDY44553.1| BnaA01g21860D [Brassica
napus]
Length = 280
Score = 159 bits (403), Expect = 6e-37
Identities = 76/94 (80%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS+VPVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 124 GHVGLGVKCSKEVATAIRGGIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 183
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 184 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 217
>gb|ABB29648.1| ribosomal protein 2 small subunit, partial [Suberites ficus]
Length = 116
Score = 159 bits (403), Expect = 6e-37
Identities = 75/94 (79%), Positives = 81/94 (86%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRG I+ AKLS++PVRLGYWGNK+GAPHTVP KVTGKCGSV VR
Sbjct: 18 GHVGLGVKCSKEVATAIRGAIVLAKLSVIPVRLGYWGNKLGAPHTVPCKVTGKCGSVLVR 77
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
L+PAPRGT IVAAG P KLL AGV D YT +G
Sbjct: 78 LIPAPRGTSIVAAGVPKKLLQMAGVSDCYTSARG 111
>ref|XP_013672274.1| PREDICTED: 40S ribosomal protein S2-2-like [Brassica napus]
Length = 276
Score = 159 bits (402), Expect = 8e-37
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS++PVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 120 GHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 179
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 180 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 213
>ref|XP_013747801.1| PREDICTED: 40S ribosomal protein S2-3 [Brassica napus]
Length = 285
Score = 159 bits (402), Expect = 8e-37
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS++PVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 128 GHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 187
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 188 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 221
>ref|XP_013734456.1| PREDICTED: 40S ribosomal protein S2-2-like [Brassica napus]
Length = 282
Score = 159 bits (402), Expect = 8e-37
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS++PVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 125 GHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 184
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 185 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 218
>ref|XP_013636584.1| PREDICTED: 40S ribosomal protein S2-2-like [Brassica oleracea var.
oleracea]
Length = 285
Score = 159 bits (402), Expect = 8e-37
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS++PVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 128 GHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 187
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 188 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 221
>ref|XP_013630038.1| PREDICTED: 40S ribosomal protein S2-2-like [Brassica oleracea var.
oleracea]
Length = 282
Score = 159 bits (402), Expect = 8e-37
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS++PVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 125 GHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 184
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 185 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 218
>ref|XP_013605717.1| PREDICTED: 40S ribosomal protein S2-2 [Brassica oleracea var.
oleracea]
Length = 276
Score = 159 bits (402), Expect = 8e-37
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS++PVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 120 GHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 179
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 180 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 213
>ref|XP_012756392.1| hypothetical protein SAMD00019534_028050 [Acytostelium subglobosum
LB1] gi|735857024|dbj|GAM19630.1| hypothetical protein
SAMD00019534_028050 [Acytostelium subglobosum LB1]
Length = 281
Score = 159 bits (402), Expect = 8e-37
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKC+KEVATAI G I+ AKLS++PVR GYWGNKIGAPHTVPTKVTGKCGSV +R
Sbjct: 136 GHVGLGVKCAKEVATAIAGAIVTAKLSVIPVRRGYWGNKIGAPHTVPTKVTGKCGSVALR 195
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRGTGIVAA P KLL FAGV+DVYT G
Sbjct: 196 MVPAPRGTGIVAARVPKKLLQFAGVEDVYTSSTG 229
>ref|XP_009133513.1| PREDICTED: 40S ribosomal protein S2-2-like [Brassica rapa]
gi|923544565|ref|XP_013734455.1| PREDICTED: 40S
ribosomal protein S2-2-like [Brassica napus]
gi|923909059|ref|XP_013724387.1| PREDICTED: 40S
ribosomal protein S2-2-like [Brassica napus]
Length = 282
Score = 159 bits (402), Expect = 8e-37
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS++PVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 125 GHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 184
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 185 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 218
>ref|XP_013636095.1| PREDICTED: 40S ribosomal protein S2-3-like [Brassica oleracea var.
oleracea] gi|674953477|emb|CDX79908.1| BnaA05g02480D
[Brassica napus]
Length = 285
Score = 159 bits (402), Expect = 8e-37
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS++PVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 128 GHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 187
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 188 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 221
>emb|CDY06903.1| BnaA04g24120D [Brassica napus]
Length = 256
Score = 159 bits (402), Expect = 8e-37
Identities = 75/94 (79%), Positives = 82/94 (87%)
Frame = +1
Query: 7 GHVGLGVKCSKEVATAIRGGIIAAKLSLVPVRLGYWGNKIGAPHTVPTKVTGKCGSVRVR 186
GHVGLGVKCSKEVATAIRGGII AKLS++PVR GYWGNKIG PHTVP KVTGKCGSV VR
Sbjct: 99 GHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 158
Query: 187 LVPAPRGTGIVAAGTPHKLLSFAGVDDVYTKCQG 288
+VPAPRG GIVAA P K+L FAG+DDV+T +G
Sbjct: 159 MVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRG 192