BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00023313
         (569 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007019128.1| Replication factor C / DNA polymerase III ga...   174   3e-41
ref|XP_010063944.1| PREDICTED: replication factor C subunit 3 [E...   172   1e-40
ref|XP_012446954.1| PREDICTED: replication factor C subunit 5 [G...   170   4e-40
ref|XP_009379030.1| PREDICTED: replication factor C subunit 3-li...   170   5e-40
ref|XP_008219611.1| PREDICTED: replication factor C subunit 3 [P...   170   5e-40
ref|XP_008378444.1| PREDICTED: replication factor C subunit 3-li...   169   7e-40
ref|XP_004242038.1| PREDICTED: replication factor C subunit 3 [S...   169   7e-40
ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [V...   169   9e-40
ref|XP_013648670.1| PREDICTED: replication factor C subunit 5-li...   169   1e-39
ref|XP_009629771.1| PREDICTED: replication factor C subunit 3 [N...   168   2e-39
ref|XP_013692974.1| PREDICTED: replication factor C subunit 5-li...   167   3e-39
ref|XP_010095414.1| Replication factor C subunit 5 [Morus notabi...   167   3e-39
ref|XP_008361521.1| PREDICTED: replication factor C subunit 3-li...   167   3e-39
ref|XP_009801157.1| PREDICTED: replication factor C subunit 3 [N...   167   3e-39
ref|XP_013591436.1| PREDICTED: replication factor C subunit 5 [B...   167   4e-39
ref|XP_009104621.1| PREDICTED: replication factor C subunit 5 [B...   167   4e-39
ref|XP_008466735.1| PREDICTED: replication factor C subunit 5 [C...   167   4e-39
gb|KHN21714.1| Replication factor C subunit 5 [Glycine soja]          166   6e-39
ref|XP_008338684.1| PREDICTED: replication factor C subunit 3, p...   166   6e-39
ref|XP_012078293.1| PREDICTED: replication factor C subunit 5 [J...   166   6e-39

>ref|XP_007019128.1| Replication factor C / DNA polymerase III gamma-tau subunit
           [Theobroma cacao] gi|508724456|gb|EOY16353.1|
           Replication factor C / DNA polymerase III gamma-tau
           subunit [Theobroma cacao]
          Length = 436

 Score =  174 bits (440), Expect = 3e-41
 Identities = 86/95 (90%), Positives = 93/95 (97%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNESFA SF++IS+IKTRKGLAL+DIVREVTMFVFKIKMPS+VRV
Sbjct: 335 GNPLPKDIEQISYWLLNESFAESFKRISEIKTRKGLALVDIVREVTMFVFKIKMPSDVRV 394

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEY L+FGCNDKLQLG+LIATFTRARS
Sbjct: 395 QLINDLADIEYHLSFGCNDKLQLGSLIATFTRARS 429


>ref|XP_010063944.1| PREDICTED: replication factor C subunit 3 [Eucalyptus grandis]
           gi|629105780|gb|KCW71249.1| hypothetical protein
           EUGRSUZ_F04342 [Eucalyptus grandis]
          Length = 371

 Score =  172 bits (435), Expect = 1e-40
 Identities = 84/95 (88%), Positives = 92/95 (96%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNESFA S ++ISDIKTRKGLALLD+VREVTMFVFKIKMPS+VRV
Sbjct: 270 GNPLPKDIEQISYWLLNESFATSLKRISDIKTRKGLALLDVVREVTMFVFKIKMPSDVRV 329

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRL+FGCNDKLQLG+LIA+FT AR+
Sbjct: 330 QLINDLADIEYRLSFGCNDKLQLGSLIASFTHARA 364


>ref|XP_012446954.1| PREDICTED: replication factor C subunit 5 [Gossypium raimondii]
           gi|763792295|gb|KJB59291.1| hypothetical protein
           B456_009G247600 [Gossypium raimondii]
          Length = 363

 Score =  170 bits (431), Expect = 4e-40
 Identities = 83/95 (87%), Positives = 92/95 (96%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNESFA SF+++S+ KTRKGLAL+DIVREVTMFVFKIKMPS+VRV
Sbjct: 262 GNPLPKDIEQISYWLLNESFAESFKRVSETKTRKGLALIDIVREVTMFVFKIKMPSDVRV 321

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRL+FGCNDKLQLG+LIA FT+ARS
Sbjct: 322 QLINDLADIEYRLSFGCNDKLQLGSLIAIFTKARS 356


>ref|XP_009379030.1| PREDICTED: replication factor C subunit 3-like [Pyrus x
           bretschneideri] gi|694408745|ref|XP_009379036.1|
           PREDICTED: replication factor C subunit 3-like [Pyrus x
           bretschneideri]
          Length = 366

 Score =  170 bits (430), Expect = 5e-40
 Identities = 83/95 (87%), Positives = 92/95 (96%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNESFA SF++ISD+K RKGLAL+DIVREVTMFVFKI MP++VRV
Sbjct: 265 GNPLPKDIEQISYWLLNESFAESFKRISDMKARKGLALIDIVREVTMFVFKIMMPADVRV 324

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           +LINDLADIEYRLTFGCNDKLQLG+LIATFT+ARS
Sbjct: 325 KLINDLADIEYRLTFGCNDKLQLGSLIATFTKARS 359


>ref|XP_008219611.1| PREDICTED: replication factor C subunit 3 [Prunus mume]
          Length = 368

 Score =  170 bits (430), Expect = 5e-40
 Identities = 83/95 (87%), Positives = 91/95 (95%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNESFA SF++ISD+KT KGLAL+DIVREVTMFVFKIKMP +VRV
Sbjct: 267 GNPLPKDIEQISYWLLNESFAESFKRISDMKTTKGLALIDIVREVTMFVFKIKMPPDVRV 326

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRLTFGCND+LQLG+L+ATFT ARS
Sbjct: 327 QLINDLADIEYRLTFGCNDRLQLGSLVATFTTARS 361


>ref|XP_008378444.1| PREDICTED: replication factor C subunit 3-like [Malus domestica]
          Length = 366

 Score =  169 bits (429), Expect = 7e-40
 Identities = 83/95 (87%), Positives = 91/95 (95%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNESFA SF++ISD+K RKGLAL+DIVREVTMFVFKI MP+ VRV
Sbjct: 265 GNPLPKDIEQISYWLLNESFAESFKRISDMKARKGLALIDIVREVTMFVFKIMMPAEVRV 324

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           +LINDLADIEYRLTFGCNDKLQLG+LIATFT+ARS
Sbjct: 325 KLINDLADIEYRLTFGCNDKLQLGSLIATFTKARS 359


>ref|XP_004242038.1| PREDICTED: replication factor C subunit 3 [Solanum lycopersicum]
          Length = 357

 Score =  169 bits (429), Expect = 7e-40
 Identities = 82/95 (86%), Positives = 92/95 (96%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNE FA+S ++IS+IKTRKGLAL+DIVREVTMFVFKIKMP+NVRV
Sbjct: 256 GNPLPKDIEQISYWLLNEPFAISCKRISEIKTRKGLALVDIVREVTMFVFKIKMPANVRV 315

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLIN++ADIEYRLTFGCNDKLQLG+LI+ FTRARS
Sbjct: 316 QLINEMADIEYRLTFGCNDKLQLGSLISAFTRARS 350


>ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [Vitis vinifera]
           gi|302141794|emb|CBI18997.3| unnamed protein product
           [Vitis vinifera]
          Length = 360

 Score =  169 bits (428), Expect = 9e-40
 Identities = 82/95 (86%), Positives = 92/95 (96%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNESFA SF +IS++K RKGLAL+D+VREVTMFVFKIKMPS+VRV
Sbjct: 259 GNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVDVVREVTMFVFKIKMPSDVRV 318

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRL+FGCNDKLQLG+LIA+FTRAR+
Sbjct: 319 QLINDLADIEYRLSFGCNDKLQLGSLIASFTRARA 353


>ref|XP_013648670.1| PREDICTED: replication factor C subunit 5-like [Brassica napus]
          Length = 361

 Score =  169 bits (427), Expect = 1e-39
 Identities = 81/95 (85%), Positives = 93/95 (97%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLP+DIEQIS+WLLNE FA S+++IS++KTRKGLA++DIVREVTMFVFKIKMPSNVRV
Sbjct: 260 GNPLPRDIEQISHWLLNEPFAESYKKISEMKTRKGLAIVDIVREVTMFVFKIKMPSNVRV 319

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRL+FGCNDKLQLGA+I+TFTRARS
Sbjct: 320 QLINDLADIEYRLSFGCNDKLQLGAIISTFTRARS 354


>ref|XP_009629771.1| PREDICTED: replication factor C subunit 3 [Nicotiana
           tomentosiformis]
          Length = 360

 Score =  168 bits (425), Expect = 2e-39
 Identities = 82/95 (86%), Positives = 91/95 (95%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNE FA+S ++IS+IKTRKGLAL+DIVREVTMFVFKIKMP NVRV
Sbjct: 259 GNPLPKDIEQISYWLLNEPFAISCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPNVRV 318

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLIN++A+IEYRLTFGCNDKLQLG+LIA FTRARS
Sbjct: 319 QLINEMANIEYRLTFGCNDKLQLGSLIAAFTRARS 353


>ref|XP_013692974.1| PREDICTED: replication factor C subunit 5-like isoform X1 [Brassica
           napus]
          Length = 358

 Score =  167 bits (424), Expect = 3e-39
 Identities = 81/95 (85%), Positives = 92/95 (96%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQIS+WLLNESFA S+++IS++KTRKGLA++DIVREVTMFVFKIKMPS+VRV
Sbjct: 257 GNPLPKDIEQISHWLLNESFAESYKKISEMKTRKGLAIVDIVREVTMFVFKIKMPSHVRV 316

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRL+FGCNDKLQLGA+I TFT ARS
Sbjct: 317 QLINDLADIEYRLSFGCNDKLQLGAIICTFTHARS 351


>ref|XP_010095414.1| Replication factor C subunit 5 [Morus notabilis]
           gi|703163098|ref|XP_010113225.1| Replication factor C
           subunit 5 [Morus notabilis] gi|587870830|gb|EXB60106.1|
           Replication factor C subunit 5 [Morus notabilis]
           gi|587990838|gb|EXC75062.1| Replication factor C subunit
           5 [Morus notabilis]
          Length = 365

 Score =  167 bits (424), Expect = 3e-39
 Identities = 82/95 (86%), Positives = 92/95 (96%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNESFA SF+QIS++K RKGLAL+DIVREVTMFVFKIKMPS+ RV
Sbjct: 264 GNPLPKDIEQISYWLLNESFAESFKQISNMKGRKGLALVDIVREVTMFVFKIKMPSDARV 323

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRL+FGCNDKLQLG+LIA+FT+AR+
Sbjct: 324 QLINDLADIEYRLSFGCNDKLQLGSLIASFTKARA 358


>ref|XP_008361521.1| PREDICTED: replication factor C subunit 3-like, partial [Malus
           domestica]
          Length = 234

 Score =  167 bits (424), Expect = 3e-39
 Identities = 81/95 (85%), Positives = 90/95 (94%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQ+SYWLLN+SFA SF+ ISD+  RKGLAL+DIVREVTMF+FKIKMP+ VRV
Sbjct: 133 GNPLPKDIEQMSYWLLNDSFAGSFKTISDMNARKGLALIDIVREVTMFIFKIKMPAGVRV 192

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRLTFGCNDKLQLG+LIATFT+ARS
Sbjct: 193 QLINDLADIEYRLTFGCNDKLQLGSLIATFTKARS 227


>ref|XP_009801157.1| PREDICTED: replication factor C subunit 3 [Nicotiana sylvestris]
          Length = 360

 Score =  167 bits (423), Expect = 3e-39
 Identities = 82/95 (86%), Positives = 91/95 (95%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNE FA+S ++IS+IKTRKGLAL+DIVREVTMFVFKIKMP NVRV
Sbjct: 259 GNPLPKDIEQISYWLLNEPFALSCKRISEIKTRKGLALVDIVREVTMFVFKIKMPPNVRV 318

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLIN++A+IEYRLTFGCNDKLQLG+LIA FTRARS
Sbjct: 319 QLINEMANIEYRLTFGCNDKLQLGSLIAAFTRARS 353


>ref|XP_013591436.1| PREDICTED: replication factor C subunit 5 [Brassica oleracea var.
           oleracea]
          Length = 361

 Score =  167 bits (422), Expect = 4e-39
 Identities = 80/95 (84%), Positives = 92/95 (96%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLP+DIEQIS+WLLNE FA S+++IS++KTRKGLA++DIVREVTMFVFKIKMPSNVRV
Sbjct: 260 GNPLPRDIEQISHWLLNEPFAESYKKISEMKTRKGLAIVDIVREVTMFVFKIKMPSNVRV 319

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRL+FGCNDKLQLGA+I+TFT ARS
Sbjct: 320 QLINDLADIEYRLSFGCNDKLQLGAIISTFTHARS 354


>ref|XP_009104621.1| PREDICTED: replication factor C subunit 5 [Brassica rapa]
          Length = 361

 Score =  167 bits (422), Expect = 4e-39
 Identities = 80/95 (84%), Positives = 92/95 (96%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLP+DIEQIS+WLLNE FA S+++IS++KTRKGLA++DIVREVTMFVFKIKMPSNVRV
Sbjct: 260 GNPLPRDIEQISHWLLNEPFAESYKKISEMKTRKGLAIVDIVREVTMFVFKIKMPSNVRV 319

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRL+FGCNDKLQLGA+I+TFT ARS
Sbjct: 320 QLINDLADIEYRLSFGCNDKLQLGAIISTFTHARS 354


>ref|XP_008466735.1| PREDICTED: replication factor C subunit 5 [Cucumis melo]
          Length = 363

 Score =  167 bits (422), Expect = 4e-39
 Identities = 79/95 (83%), Positives = 93/95 (97%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNP+PKDIEQIS+WLLNE F+ SF++IS+IKTRKGLAL+DIVREVT+FVFKIKMPSN+RV
Sbjct: 262 GNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALVDIVREVTLFVFKIKMPSNIRV 321

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYR++FGCNDKLQLG+LI++FTRARS
Sbjct: 322 QLINDLADIEYRMSFGCNDKLQLGSLISSFTRARS 356


>gb|KHN21714.1| Replication factor C subunit 5 [Glycine soja]
          Length = 361

 Score =  166 bits (421), Expect = 6e-39
 Identities = 81/95 (85%), Positives = 91/95 (95%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQISYWLLNE FA SF++I ++KTRKGLAL+DIVREVTMFVFKIKMPS VRV
Sbjct: 260 GNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALIDIVREVTMFVFKIKMPSAVRV 319

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QL+NDLADIEYRL+FGCNDKLQLG++IA+FTRARS
Sbjct: 320 QLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARS 354


>ref|XP_008338684.1| PREDICTED: replication factor C subunit 3, partial [Malus
           domestica]
          Length = 234

 Score =  166 bits (421), Expect = 6e-39
 Identities = 81/95 (85%), Positives = 89/95 (93%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLPKDIEQ+SYWLLN SFA SF+ ISD+  RKGLAL+DIVREVTMF+FKIKMP+ VRV
Sbjct: 133 GNPLPKDIEQMSYWLLNXSFAGSFKTISDMNARKGLALIDIVREVTMFIFKIKMPAGVRV 192

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLINDLADIEYRLTFGCNDKLQLG+LIATFT+ARS
Sbjct: 193 QLINDLADIEYRLTFGCNDKLQLGSLIATFTKARS 227


>ref|XP_012078293.1| PREDICTED: replication factor C subunit 5 [Jatropha curcas]
           gi|643723235|gb|KDP32840.1| hypothetical protein
           JCGZ_12132 [Jatropha curcas]
          Length = 367

 Score =  166 bits (421), Expect = 6e-39
 Identities = 80/95 (84%), Positives = 93/95 (97%)
 Frame = -2

Query: 568 GNPLPKDIEQISYWLLNESFAVSFRQISDIKTRKGLALLDIVREVTMFVFKIKMPSNVRV 389
           GNPLP+DIEQISYWLLNESFA + ++IS+IKT+KGLAL+DIVREVTMFVFKIKMPS+VRV
Sbjct: 266 GNPLPRDIEQISYWLLNESFAETLKRISEIKTKKGLALVDIVREVTMFVFKIKMPSDVRV 325

Query: 388 QLINDLADIEYRLTFGCNDKLQLGALIATFTRARS 284
           QLIND+ADIEYRL+FGCNDKLQLG+LI++FTRARS
Sbjct: 326 QLINDMADIEYRLSFGCNDKLQLGSLISSFTRARS 360