BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00023117
         (292 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010252152.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    59   2e-06
ref|XP_010268603.1| PREDICTED: THO complex subunit 4C-like [Nelu...    57   7e-06

>ref|XP_010252152.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin-like isoform X1
           [Nelumbo nucifera] gi|719987872|ref|XP_010252153.1|
           PREDICTED: rRNA 2'-O-methyltransferase fibrillarin-like
           isoform X1 [Nelumbo nucifera]
          Length = 308

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
 Frame = +2

Query: 5   RGRGRGRESKLCTHCGLTNHTVNYCWELHGKPPPSSSAHQV-----TSNKGNTSVTPTAP 169
           RG+G+G  ++ CTHCG   H+ N+C+ LHG PP +   H        S+     +TP+  
Sbjct: 186 RGKGKGNSTRKCTHCGKEGHSANFCYNLHG-PPSTWENHAAAGGVDVSDNQQPYLTPSTS 244

Query: 170 HMEVEPAMITISRDEYAQLMSQQRPSTSSSM 262
               +  M+++ RDEY + +      T++++
Sbjct: 245 TFISKKEMMSVPRDEYERFLQTTSQHTTATI 275


>ref|XP_010268603.1| PREDICTED: THO complex subunit 4C-like [Nelumbo nucifera]
          Length = 198

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/49 (48%), Positives = 35/49 (71%)
 Frame = +2

Query: 5   RGRGRGRESKLCTHCGLTNHTVNYCWELHGKPPPSSSAHQVTSNKGNTS 151
           RGRGRG   + CTH G+  HT+NYC++LHG  PPS+ A+ V ++  ++S
Sbjct: 150 RGRGRGSGPRKCTHYGMDGHTINYCYDLHG--PPSTWANHVATSDSSSS 196