BLASTX nr result
ID: Cornus23_contig00022874
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cornus23_contig00022874 (376 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa ... 58 2e-06 ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citr... 58 2e-06 ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citr... 58 2e-06 >ref|XP_006479195.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2 [Citrus sinensis] Length = 618 Score = 58.2 bits (139), Expect = 2e-06 Identities = 29/64 (45%), Positives = 39/64 (60%) Frame = -3 Query: 374 ELFDESVAPEDPKKIRTETHLDYEDNFPTFSKKELELEDSYKDGDLGTEDVYEDAEDTEG 195 +LFD+SV E+PKK RT++H DY+D FP KKE E ED +GD +A + E Sbjct: 539 KLFDDSVTSENPKKKRTDSHSDYDDKFPNNGKKEHESEDLGPEGDFDANGDVGEAYENEL 598 Query: 194 LHGN 183 +GN Sbjct: 599 DYGN 602 >ref|XP_006443522.1| hypothetical protein CICLE_v10019321mg [Citrus clementina] gi|568851023|ref|XP_006479194.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X1 [Citrus sinensis] gi|557545784|gb|ESR56762.1| hypothetical protein CICLE_v10019321mg [Citrus clementina] Length = 620 Score = 58.2 bits (139), Expect = 2e-06 Identities = 29/64 (45%), Positives = 39/64 (60%) Frame = -3 Query: 374 ELFDESVAPEDPKKIRTETHLDYEDNFPTFSKKELELEDSYKDGDLGTEDVYEDAEDTEG 195 +LFD+SV E+PKK RT++H DY+D FP KKE E ED +GD +A + E Sbjct: 541 KLFDDSVTSENPKKKRTDSHSDYDDKFPNNGKKEHESEDLGPEGDFDANGDVGEAYENEL 600 Query: 194 LHGN 183 +GN Sbjct: 601 DYGN 604 >ref|XP_006443520.1| hypothetical protein CICLE_v10019321mg [Citrus clementina] gi|567902066|ref|XP_006443521.1| hypothetical protein CICLE_v10019321mg [Citrus clementina] gi|557545782|gb|ESR56760.1| hypothetical protein CICLE_v10019321mg [Citrus clementina] gi|557545783|gb|ESR56761.1| hypothetical protein CICLE_v10019321mg [Citrus clementina] Length = 543 Score = 58.2 bits (139), Expect = 2e-06 Identities = 29/64 (45%), Positives = 39/64 (60%) Frame = -3 Query: 374 ELFDESVAPEDPKKIRTETHLDYEDNFPTFSKKELELEDSYKDGDLGTEDVYEDAEDTEG 195 +LFD+SV E+PKK RT++H DY+D FP KKE E ED +GD +A + E Sbjct: 464 KLFDDSVTSENPKKKRTDSHSDYDDKFPNNGKKEHESEDLGPEGDFDANGDVGEAYENEL 523 Query: 194 LHGN 183 +GN Sbjct: 524 DYGN 527