BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00022732
         (1203 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III s...   322   4e-85
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s...   322   4e-85
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p...   317   1e-83
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ...   317   1e-83
emb|CDP02819.1| unnamed protein product [Coffea canephora]            311   7e-82
ref|XP_012491679.1| PREDICTED: DNA-directed RNA polymerase III s...   309   3e-81
gb|KJB43539.1| hypothetical protein B456_007G205200 [Gossypium r...   309   3e-81
ref|XP_012079063.1| PREDICTED: DNA-directed RNA polymerase III s...   308   5e-81
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       306   2e-80
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu...   305   5e-80
gb|KHG05676.1| DNA-directed RNA polymerase III subunit RPC5 [Gos...   305   7e-80
ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III s...   303   1e-79
gb|KHN35144.1| DNA-directed RNA polymerase III subunit RPC5 [Gly...   303   1e-79
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s...   303   1e-79
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   303   2e-79
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr...   303   2e-79
ref|XP_009356672.1| PREDICTED: DNA-directed RNA polymerase III s...   301   1e-78
ref|XP_009356671.1| PREDICTED: DNA-directed RNA polymerase III s...   301   1e-78
ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III s...   300   2e-78
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   300   2e-78

>ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
           [Vitis vinifera] gi|731387214|ref|XP_010649169.1|
           PREDICTED: DNA-directed RNA polymerase III subunit RPC5
           isoform X1 [Vitis vinifera]
          Length = 693

 Score =  322 bits (825), Expect = 4e-85
 Identities = 185/333 (55%), Positives = 221/333 (66%), Gaps = 7/333 (2%)
 Frame = -1

Query: 978 APIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNL--IPLKKNEESDSLPS 805
           AP+  PSR   FAPK+SK K                +QP+ S L  + L   +E DS P 
Sbjct: 12  APVRRPSR---FAPKSSKPKLIPKPEPS--------SQPEPSKLDDVTLINKKEEDSQPP 60

Query: 804 FVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPIQEDDA-EDQVVREIDVFFTPA-IDT 631
            V  A    E   S   +   EM+V+ +    + ++EDD  ED VVREIDVFFTP   D 
Sbjct: 61  LVKKAD---EPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDD 117

Query: 630 NTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDFRT--RMA 457
           NT++YVLQYPLRP WRPYEL E C+EVRVKP S E+EVDLS+DVDSKNYDPD     RM 
Sbjct: 118 NTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMK 177

Query: 456 KQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNATSSIE 277
           KQTLSTSWKP  TTGY VGVLMGNKL LNPIHAVVQLRPS E+L SGG+K+KNN T    
Sbjct: 178 KQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTN 237

Query: 276 ATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSASHLQKMVA 97
           + ++ E  +E +SV   KKQN+  G ++EQN D  E WVPL+YH S+S+FSA +LQKMVA
Sbjct: 238 SAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVA 297

Query: 96  HESSPIQFSMSPYDYGCSLF-PGTSNDSIGPKG 1
            ++SPIQF MSPY+Y  SL  PG SND    KG
Sbjct: 298 EDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKG 330


>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
           [Vitis vinifera] gi|297735187|emb|CBI17549.3| unnamed
           protein product [Vitis vinifera]
          Length = 688

 Score =  322 bits (825), Expect = 4e-85
 Identities = 185/333 (55%), Positives = 221/333 (66%), Gaps = 7/333 (2%)
 Frame = -1

Query: 978 APIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNL--IPLKKNEESDSLPS 805
           AP+  PSR   FAPK+SK K                +QP+ S L  + L   +E DS P 
Sbjct: 12  APVRRPSR---FAPKSSKPKLIPKPEPS--------SQPEPSKLDDVTLINKKEEDSQPP 60

Query: 804 FVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPIQEDDA-EDQVVREIDVFFTPA-IDT 631
            V  A    E   S   +   EM+V+ +    + ++EDD  ED VVREIDVFFTP   D 
Sbjct: 61  LVKKAD---EPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDD 117

Query: 630 NTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDFRT--RMA 457
           NT++YVLQYPLRP WRPYEL E C+EVRVKP S E+EVDLS+DVDSKNYDPD     RM 
Sbjct: 118 NTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMK 177

Query: 456 KQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNATSSIE 277
           KQTLSTSWKP  TTGY VGVLMGNKL LNPIHAVVQLRPS E+L SGG+K+KNN T    
Sbjct: 178 KQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTN 237

Query: 276 ATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSASHLQKMVA 97
           + ++ E  +E +SV   KKQN+  G ++EQN D  E WVPL+YH S+S+FSA +LQKMVA
Sbjct: 238 SAVKLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVA 297

Query: 96  HESSPIQFSMSPYDYGCSLF-PGTSNDSIGPKG 1
            ++SPIQF MSPY+Y  SL  PG SND    KG
Sbjct: 298 EDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKG 330


>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao] gi|508699254|gb|EOX91150.1|
            Transcription regulators,zinc ion binding, putative
            isoform 3 [Theobroma cacao]
          Length = 736

 Score =  317 bits (812), Expect = 1e-83
 Identities = 177/337 (52%), Positives = 221/337 (65%), Gaps = 17/337 (5%)
 Frame = -1

Query: 975  PIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIP------------LKK 832
            P    +R T+FAPK+SKF               S  +P  S   P             K+
Sbjct: 12   PSQVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPPPPPESISRKKE 71

Query: 831  NEESDSLPSFVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPIQED---DAEDQVVREI 661
            NEE D  P  +    A+T+ E S  S+   +M+++ EE K + I  +   + ED VVREI
Sbjct: 72   NEEEDIKPPVI----AETKTEQSF-SNGAVKMEIE-EEAKEDVIMNEGNREEEDMVVREI 125

Query: 660  DVFFTPAIDTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYD 481
            DVFFTP+ID NTQLYVLQYPLRPCWRPYELDE CEEVRVKP S E+E+DL+VDVDS NYD
Sbjct: 126  DVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYD 185

Query: 480  PD--FRTRMAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSK 307
             +   R +M KQTLS+SW P  TTGYAVGVLMG+KL LNPIHAVVQLRPS  HLK   SK
Sbjct: 186  SERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSK 245

Query: 306  KKNNATSSIEATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNF 127
            +KN A +  E T++ E+ ++ K+   S KQN++  +  EQ  D  ECWVPL+YH SK++F
Sbjct: 246  RKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDF 305

Query: 126  SASHLQKMVAHESSPIQFSMSPYDYGCSLFPGTSNDS 16
            SA +LQ+M+A ES  IQF+MSPYDY  SL PG SN++
Sbjct: 306  SAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN 342


>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
            gi|508699252|gb|EOX91148.1| SIN-like family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  317 bits (812), Expect = 1e-83
 Identities = 177/337 (52%), Positives = 221/337 (65%), Gaps = 17/337 (5%)
 Frame = -1

Query: 975  PIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIP------------LKK 832
            P    +R T+FAPK+SKF               S  +P  S   P             K+
Sbjct: 12   PSQVNTRTTKFAPKSSKFAPRLKPNFKLKPEPSSKQEPLNSGPKPEPPPPPPESISRKKE 71

Query: 831  NEESDSLPSFVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPIQED---DAEDQVVREI 661
            NEE D  P  +    A+T+ E S  S+   +M+++ EE K + I  +   + ED VVREI
Sbjct: 72   NEEEDIKPPVI----AETKTEQSF-SNGAVKMEIE-EEAKEDVIMNEGNREEEDMVVREI 125

Query: 660  DVFFTPAIDTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYD 481
            DVFFTP+ID NTQLYVLQYPLRPCWRPYELDE CEEVRVKP S E+E+DL+VDVDS NYD
Sbjct: 126  DVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYD 185

Query: 480  PD--FRTRMAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSK 307
             +   R +M KQTLS+SW P  TTGYAVGVLMG+KL LNPIHAVVQLRPS  HLK   SK
Sbjct: 186  SERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSK 245

Query: 306  KKNNATSSIEATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNF 127
            +KN A +  E T++ E+ ++ K+   S KQN++  +  EQ  D  ECWVPL+YH SK++F
Sbjct: 246  RKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDF 305

Query: 126  SASHLQKMVAHESSPIQFSMSPYDYGCSLFPGTSNDS 16
            SA +LQ+M+A ES  IQF+MSPYDY  SL PG SN++
Sbjct: 306  SAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNN 342


>emb|CDP02819.1| unnamed protein product [Coffea canephora]
          Length = 687

 Score =  311 bits (797), Expect = 7e-82
 Identities = 172/339 (50%), Positives = 219/339 (64%), Gaps = 14/339 (4%)
 Frame = -1

Query: 975 PIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIPLKKNEESDSLP---- 808
           P  AP+R +RFAPK SKFK                 +P  +    + K EE DS P    
Sbjct: 9   PSQAPTRPSRFAPKGSKFKPR--------------TEPVAATSNSIAKKEELDSKPVSPI 54

Query: 807 -SFVDSATAKTEYEPSRPSSATAEMDVDG------EETKAEPIQE-DDAEDQVVREIDVF 652
            S   +A  K E   S   S +  MDVD       E+ K EP++  ++ ED++VREIDV+
Sbjct: 55  NSSTTAAAGKAEDAASASVSQSVAMDVDAKVEEEAEQPKDEPMESREEGEDEIVREIDVY 114

Query: 651 FTPAIDTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDF 472
            TP+ID NT+LYVLQYPLRP WRPYELD+ CEEVRVK  S E+EVDL+VDVDSKNYD D 
Sbjct: 115 LTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKSKSAEVEVDLAVDVDSKNYDSDA 174

Query: 471 --RTRMAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKN 298
             R  M KQTL++SWKP  T GYAVGVL+GNKL LNPIHAVVQLRPS +H K   SK++ 
Sbjct: 175 DPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRT 234

Query: 297 NATSSIEATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSAS 118
            A+S++E   + E++    +    KKQ +  G V EQNKD  E W+PL YHG++S+ S S
Sbjct: 235 TASSNLEDNTKGEEV----TTGSLKKQGKSSGPVIEQNKDTREDWIPLNYHGARSDISMS 290

Query: 117 HLQKMVAHESSPIQFSMSPYDYGCSLFPGTSNDSIGPKG 1
           +++KMV H+SS IQFSM+ +DY  +L PGTSN++ G  G
Sbjct: 291 YVRKMVEHDSSHIQFSMNRHDYVNTLCPGTSNENNGSNG 329


>ref|XP_012491679.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Gossypium raimondii] gi|763776418|gb|KJB43541.1|
            hypothetical protein B456_007G205200 [Gossypium
            raimondii] gi|763776419|gb|KJB43542.1| hypothetical
            protein B456_007G205200 [Gossypium raimondii]
          Length = 703

 Score =  309 bits (792), Expect = 3e-81
 Identities = 173/337 (51%), Positives = 221/337 (65%), Gaps = 20/337 (5%)
 Frame = -1

Query: 966  APSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIPL----------KKNEESD 817
            A +R T+FAPK+SKF               S  +PQ+S   P           K+N+E D
Sbjct: 15   ANTRTTKFAPKSSKFAPKLKSTSKPKPEPSSKQEPQDSAPKPQPPPVEAVSKKKENDEED 74

Query: 816  SLPSFVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPI------QED--DAEDQVVREI 661
              P  V    A+        S+   +M++D EETK + I      +ED  + ED VVREI
Sbjct: 75   VKPPMVAEPKAEQSI-----SNGAVKMEID-EETKEDEILTEANREEDQGEEEDMVVREI 128

Query: 660  DVFFTPAIDTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYD 481
            DVFFTP+ID + QLYVLQYPLRPCWRPYELDE C+EVRVKP S E+E+D+SVDVDS NYD
Sbjct: 129  DVFFTPSIDADAQLYVLQYPLRPCWRPYELDERCKEVRVKPDSWEVEIDMSVDVDSNNYD 188

Query: 480  PDF--RTRMAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSK 307
             +   + +M KQTLS+SW P   +GYAVGVLMG+KL LNPIHAVVQLRPS  HLKSG SK
Sbjct: 189  SESANKLKMTKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIHAVVQLRPSLAHLKSGVSK 248

Query: 306  KKNNATSSIEATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNF 127
            +K+   +  E T++ E  D  K+  PS KQN++  +  EQ  +  ECWVPL+YH SKS+F
Sbjct: 249  RKDTVAAEAEVTVKVEPNDG-KAAGPSAKQNQKVQSSTEQKAEDKECWVPLKYHSSKSDF 307

Query: 126  SASHLQKMVAHESSPIQFSMSPYDYGCSLFPGTSNDS 16
            SA +LQKM+A +SSPI+F+++PYDY  SL P  SN++
Sbjct: 308  SAQYLQKMMAEQSSPIEFTLNPYDYVDSLCPLPSNNN 344


>gb|KJB43539.1| hypothetical protein B456_007G205200 [Gossypium raimondii]
          Length = 653

 Score =  309 bits (792), Expect = 3e-81
 Identities = 173/337 (51%), Positives = 221/337 (65%), Gaps = 20/337 (5%)
 Frame = -1

Query: 966  APSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIPL----------KKNEESD 817
            A +R T+FAPK+SKF               S  +PQ+S   P           K+N+E D
Sbjct: 15   ANTRTTKFAPKSSKFAPKLKSTSKPKPEPSSKQEPQDSAPKPQPPPVEAVSKKKENDEED 74

Query: 816  SLPSFVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPI------QED--DAEDQVVREI 661
              P  V    A+        S+   +M++D EETK + I      +ED  + ED VVREI
Sbjct: 75   VKPPMVAEPKAEQSI-----SNGAVKMEID-EETKEDEILTEANREEDQGEEEDMVVREI 128

Query: 660  DVFFTPAIDTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYD 481
            DVFFTP+ID + QLYVLQYPLRPCWRPYELDE C+EVRVKP S E+E+D+SVDVDS NYD
Sbjct: 129  DVFFTPSIDADAQLYVLQYPLRPCWRPYELDERCKEVRVKPDSWEVEIDMSVDVDSNNYD 188

Query: 480  PDF--RTRMAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSK 307
             +   + +M KQTLS+SW P   +GYAVGVLMG+KL LNPIHAVVQLRPS  HLKSG SK
Sbjct: 189  SESANKLKMTKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIHAVVQLRPSLAHLKSGVSK 248

Query: 306  KKNNATSSIEATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNF 127
            +K+   +  E T++ E  D  K+  PS KQN++  +  EQ  +  ECWVPL+YH SKS+F
Sbjct: 249  RKDTVAAEAEVTVKVEPNDG-KAAGPSAKQNQKVQSSTEQKAEDKECWVPLKYHSSKSDF 307

Query: 126  SASHLQKMVAHESSPIQFSMSPYDYGCSLFPGTSNDS 16
            SA +LQKM+A +SSPI+F+++PYDY  SL P  SN++
Sbjct: 308  SAQYLQKMMAEQSSPIEFTLNPYDYVDSLCPLPSNNN 344


>ref|XP_012079063.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Jatropha
            curcas] gi|802640898|ref|XP_012079065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC5 [Jatropha
            curcas] gi|643721913|gb|KDP31792.1| hypothetical protein
            JCGZ_12253 [Jatropha curcas]
          Length = 720

 Score =  308 bits (790), Expect = 5e-81
 Identities = 168/349 (48%), Positives = 232/349 (66%), Gaps = 29/349 (8%)
 Frame = -1

Query: 975  PIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIPL---------KKNEE 823
            P   PSR ++FAPK+SKFK              +  + QES  +P          KKNE 
Sbjct: 12   PKQVPSRTSKFAPKSSKFKPQPKEKVKTEPS--AKPELQESVSVPKVEPQKAFSDKKNEG 69

Query: 822  SDSLPSFVDSATAKTEYEPSRPSSATAEMDVDGE------------------ETKAEPIQ 697
             + +   +++A    + EPS  ++   +M++DG+                  E +AE  +
Sbjct: 70   EEEVKPKIETAP---KTEPSVSNNGHVKMEIDGKVEVRALPKVNDPMDEDKHEEEAEGGE 126

Query: 696  EDDAEDQVVREIDVFFTPAIDTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEV 517
            E++ ED +VREIDVFFTP+ID++TQLYV+QYPLRPCWRPYELDE CEEVRVKP STE++V
Sbjct: 127  EEEEEDMIVREIDVFFTPSIDSDTQLYVMQYPLRPCWRPYELDEKCEEVRVKPQSTEVQV 186

Query: 516  DLSVDVDSKNYDPDFRTRM--AKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLR 343
            DLS+D ++ N+DP   +++   KQTLS+S+ P+CTTGYAVGVL+GNKL LNPIHAVVQLR
Sbjct: 187  DLSID-ETTNWDPAQASKLNLKKQTLSSSFMPSCTTGYAVGVLIGNKLHLNPIHAVVQLR 245

Query: 342  PSTEHLKSGGSKKKNNATSSIEATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECW 163
            PS EH+ S   K++N A+ +I+ T++  D  E K + PSKKQ ++    N+Q  D  + W
Sbjct: 246  PSLEHVNSNDLKRRNIASFNIDPTVKIGDSSEGKPIGPSKKQIKRTEVANDQISDAEKSW 305

Query: 162  VPLRYHGSKSNFSASHLQKMVAHESSPIQFSMSPYDYGCSLFPGTSNDS 16
            + L+YHGSKS+FS+S+LQKM+A E SP++F+MSPYDY  SL P  SN++
Sbjct: 306  ISLKYHGSKSDFSSSYLQKMMAEEGSPMEFTMSPYDYMSSLCPVASNNA 354


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  306 bits (784), Expect = 2e-80
 Identities = 172/339 (50%), Positives = 219/339 (64%), Gaps = 14/339 (4%)
 Frame = -1

Query: 975 PIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIPLKKNEESDSLP---- 808
           P  AP+R +RFAPK SKFK                 +P  +    + K EE DS P    
Sbjct: 9   PSQAPTRPSRFAPKGSKFKPR--------------TEPVAATSNSIAKKEELDSKPVSPI 54

Query: 807 -SFVDSATAKTEYEPSRPSSATAEMDVDG------EETKAEPIQE-DDAEDQVVREIDVF 652
            S   +A  K E   S   S +  MDVD       E+ K EP++  ++ ED++VREIDV+
Sbjct: 55  NSSTTAAAGKAEDAASASVSQSVAMDVDAKVEEEAEQPKDEPMESREEGEDEIVREIDVY 114

Query: 651 FTPAIDTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDF 472
            TP+ID NT+LYVLQYPLRP WRPYELD+ CEEVRVK  S E+EVDL+VDVDSKNYD D 
Sbjct: 115 LTPSIDPNTKLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDA 174

Query: 471 --RTRMAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKN 298
             R  M KQTL++SWKP  T GYAVGVL+GNKL LNPIHAVVQLRPS +H K   SK++ 
Sbjct: 175 DPRVSMTKQTLTSSWKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRT 234

Query: 297 NATSSIEATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSAS 118
            A+S++E   + E++    +    KKQ +  G V EQNKD  E W+PL YHG++S+ S S
Sbjct: 235 TASSNLEDNTKGEEV----TTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMS 290

Query: 117 HLQKMVAHESSPIQFSMSPYDYGCSLFPGTSNDSIGPKG 1
           +++KMV H+SS IQFSM+ +DY  +L PGTSN++ G  G
Sbjct: 291 YVRKMVEHDSSHIQFSMN-HDYVNTLCPGTSNENNGSNG 328


>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
           gi|550334731|gb|EEE90658.2| hypothetical protein
           POPTR_0007s12540g [Populus trichocarpa]
          Length = 667

 Score =  305 bits (781), Expect = 5e-80
 Identities = 167/328 (50%), Positives = 215/328 (65%), Gaps = 11/328 (3%)
 Frame = -1

Query: 951 TRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIPLKKNEESDSLPSFVDSATAKTEY 772
           +RFAP + K +               P  P+     P   N   D+ P  +D   +KTE 
Sbjct: 17  SRFAPTSKKPQPKSKPKPKPEPQESVPVGPKPD---PSVSNTAEDAKPK-IDDTLSKTE- 71

Query: 771 EPSRPSSATAEMDVDGEETKAEPIQE---------DDAEDQVVREIDVFFTPAIDTNTQL 619
             +  S+   +M++D +E +   ++E         +D +D VVREIDV++TP++D NTQL
Sbjct: 72  --TGVSNGNVKMEIDAKEERGAAVKENDLMDVDKEEDEDDVVVREIDVYYTPSVDPNTQL 129

Query: 618 YVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDFRTR--MAKQTL 445
           YV+QYPLRPCWRPYELDE C+EVRVKP STE+EVDLS+D D+KNYDPD  +R  M KQTL
Sbjct: 130 YVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSID-DTKNYDPDIASRLNMKKQTL 188

Query: 444 STSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNATSSIEATIR 265
           S+SW P   TGYAVGVL+GNKL LNPIHAVVQLRPS ++L SG SK K NATS       
Sbjct: 189 SSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGKKNATS------- 241

Query: 264 SEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSASHLQKMVAHESS 85
            ED +E K +   KKQ++Q  + NEQ  D+ E W+PL+YHGSKS+ S+ +LQ MVA ESS
Sbjct: 242 GEDSNEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSSRYLQNMVAPESS 301

Query: 84  PIQFSMSPYDYGCSLFPGTSNDSIGPKG 1
            I+F+M+PYDY  SL PG SN++I   G
Sbjct: 302 TIEFAMNPYDYMSSLCPGISNNNIKLNG 329


>gb|KHG05676.1| DNA-directed RNA polymerase III subunit RPC5 [Gossypium arboreum]
          Length = 710

 Score =  305 bits (780), Expect = 7e-80
 Identities = 170/334 (50%), Positives = 221/334 (66%), Gaps = 20/334 (5%)
 Frame = -1

Query: 957  RATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQES--NLIP--------LKKNEESDSLP 808
            ++++FAPK+SKF               S  +PQ+S   L P         K+N+E D  P
Sbjct: 25   KSSKFAPKSSKFAPKLKPTSKPKPEPSSKQEPQDSAPKLQPPPVEAVSKKKENDEEDVKP 84

Query: 807  SFVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPI------QED--DAEDQVVREIDVF 652
              V    A+        S+   +M++D E+TK + I      +ED  + ED VVREIDVF
Sbjct: 85   PMVAEPKAEQSI-----SNGAVKMEID-EDTKEDEILTEANREEDQGEEEDMVVREIDVF 138

Query: 651  FTPAIDTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDF 472
            FTP+ID + QLYVLQYPLRPCWRPYELDE C+EVRVKP S E+E+D+SVD+DS NYD + 
Sbjct: 139  FTPSIDADAQLYVLQYPLRPCWRPYELDERCKEVRVKPDSGEVEIDMSVDIDSNNYDSES 198

Query: 471  --RTRMAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKN 298
              + +M KQTLS+SW P   +GYAVGVLMG+KL LNPIHAVVQLRPS  HLKSG SK+K+
Sbjct: 199  ANKLKMTKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIHAVVQLRPSLAHLKSGVSKRKD 258

Query: 297  NATSSIEATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSAS 118
               +  E T++ E  D  K+  PS KQN++  +  EQ  +  ECWVPL+YH SKS+FSA 
Sbjct: 259  TVAAEAEVTVKVEPNDG-KAAGPSAKQNQKVQSSTEQKAEDKECWVPLKYHSSKSDFSAQ 317

Query: 117  HLQKMVAHESSPIQFSMSPYDYGCSLFPGTSNDS 16
            +LQKM+A +SSPI+F+++PYDY  SL P  SN+S
Sbjct: 318  YLQKMMAEQSSPIEFTLNPYDYVDSLCPLPSNNS 351


>ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Populus
           euphratica]
          Length = 666

 Score =  303 bits (777), Expect = 1e-79
 Identities = 167/330 (50%), Positives = 214/330 (64%), Gaps = 13/330 (3%)
 Frame = -1

Query: 951 TRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIPLKKNEESDSLPSFVDSATAKTEY 772
           +RFAP + K +               P  P+  + +    N   D+ P   D   +KTE 
Sbjct: 17  SRFAPTSKKPQPKPKPKPKPEPQESVPVAPKPDHSV---SNTAEDAKPK-TDDTLSKTE- 71

Query: 771 EPSRPSSATAEMDVDGEETKAEPIQE-----------DDAEDQVVREIDVFFTPAIDTNT 625
             +  S+   +M++D +E +   ++E           +D +D VVREIDV++TP++D NT
Sbjct: 72  --TGVSNGNVKMEIDAKEERGAAVKENDPMDVDKEEDEDEDDVVVREIDVYYTPSVDPNT 129

Query: 624 QLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDFRTR--MAKQ 451
           QLYV+QYPLRPCWRPYELDE C+EVRVKP S E+EVDLS+D D+KNYDPD  +R  M KQ
Sbjct: 130 QLYVMQYPLRPCWRPYELDERCKEVRVKPQSAEVEVDLSID-DTKNYDPDIASRLNMKKQ 188

Query: 450 TLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNATSSIEAT 271
           TLS+SW P   TGYAVGVL+GNKL LNPIHAVVQLRPS ++L SG SK K NATS     
Sbjct: 189 TLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGKKNATS----- 243

Query: 270 IRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSASHLQKMVAHE 91
              ED +E K +   KKQ++Q  + NEQ  D+ E W+PL+YHGSKS+ SA +LQ MVA E
Sbjct: 244 --GEDSNEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSARYLQNMVAPE 301

Query: 90  SSPIQFSMSPYDYGCSLFPGTSNDSIGPKG 1
           SS I+F+MSPYDY  SL PG SN++I   G
Sbjct: 302 SSTIEFAMSPYDYMSSLCPGISNNNIKLNG 331


>gb|KHN35144.1| DNA-directed RNA polymerase III subunit RPC5 [Glycine soja]
          Length = 697

 Score =  303 bits (777), Expect = 1e-79
 Identities = 165/335 (49%), Positives = 220/335 (65%), Gaps = 9/335 (2%)
 Frame = -1

Query: 978 APIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPA----QPQESNLIPLKKNEESDSL 811
           API A SR ++FAPK+SK K               P     +PQE     +KKNE+    
Sbjct: 9   APIKATSRVSKFAPKSSKLKPKPKSEPAPPKPEPQPPISKPEPQEFVAATVKKNEDDGV- 67

Query: 810 PSFVDSATAKTEYEPSRPSSATAEMDVDGEET-KAEPIQED-DAEDQVVREIDVFFTPAI 637
                     T  +P   ++   E   D  E+ + +PI ED   ED VVREIDVFF+P++
Sbjct: 68  -----ETVPPTHTKPELDATVKMEEAEDEPESVRDDPIDEDIPEEDTVVREIDVFFSPSV 122

Query: 636 DTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDFRTR-- 463
           D  TQLYV QYPLRP WRPY+LDE CEEVR+K  ++E+E+DLS+D+DS + D +F T+  
Sbjct: 123 DAQTQLYVFQYPLRPSWRPYDLDEQCEEVRLKTKTSEVEIDLSIDLDSDHIDKEFATKYN 182

Query: 462 MAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNATSS 283
           + KQTLST+WKP+   G AVG+LMG+KL L+P+HAVVQLRP+ +HL SGGSK+KN A++ 
Sbjct: 183 ITKQTLSTTWKPSHANGCAVGLLMGDKLHLHPVHAVVQLRPTLQHLNSGGSKRKNAASTG 242

Query: 282 IEATIRSEDLDEVKSVVPSKKQNRQPG-NVNEQNKDIGECWVPLRYHGSKSNFSASHLQK 106
             AT++ E  +E KSV  SKKQN+Q G ++ EQ  D  ECWVPL+YH  KS+ S+ +LQ+
Sbjct: 243 ANATVKIEGSNEEKSVATSKKQNKQTGPSIIEQKSDGDECWVPLKYHSCKSDISSRYLQQ 302

Query: 105 MVAHESSPIQFSMSPYDYGCSLFPGTSNDSIGPKG 1
           MV  ESSPI F+M  YDY  +L PG S++++ PKG
Sbjct: 303 MVTQESSPINFTMRAYDYVTALCPGGSSNNL-PKG 336


>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
           [Glycine max] gi|947078921|gb|KRH27710.1| hypothetical
           protein GLYMA_11G009900 [Glycine max]
          Length = 697

 Score =  303 bits (777), Expect = 1e-79
 Identities = 165/335 (49%), Positives = 220/335 (65%), Gaps = 9/335 (2%)
 Frame = -1

Query: 978 APIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPA----QPQESNLIPLKKNEESDSL 811
           API A SR ++FAPK+SK K               P     +PQE     +KKNE+    
Sbjct: 9   APIKATSRVSKFAPKSSKLKPKPKSEPAPPKPEPQPPISKPEPQEFVAATVKKNEDDGV- 67

Query: 810 PSFVDSATAKTEYEPSRPSSATAEMDVDGEET-KAEPIQED-DAEDQVVREIDVFFTPAI 637
                     T  +P   ++   E   D  E+ + +PI ED   ED VVREIDVFF+P++
Sbjct: 68  -----ETVPPTHTKPELDATVKMEEAEDEPESVRDDPIDEDIPEEDTVVREIDVFFSPSV 122

Query: 636 DTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDFRTR-- 463
           D  TQLYV QYPLRP WRPY+LDE CEEVR+K  ++E+E+DLS+D+DS + D +F T+  
Sbjct: 123 DAQTQLYVFQYPLRPSWRPYDLDEQCEEVRLKTKTSEVEIDLSIDLDSDHIDKEFATKYN 182

Query: 462 MAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNATSS 283
           + KQTLST+WKP+   G AVG+LMG+KL L+P+HAVVQLRP+ +HL SGGSK+KN A++ 
Sbjct: 183 ITKQTLSTTWKPSHANGCAVGLLMGDKLHLHPVHAVVQLRPTLQHLNSGGSKRKNAASTG 242

Query: 282 IEATIRSEDLDEVKSVVPSKKQNRQPG-NVNEQNKDIGECWVPLRYHGSKSNFSASHLQK 106
             AT++ E  +E KSV  SKKQN+Q G ++ EQ  D  ECWVPL+YH  KS+ S+ +LQ+
Sbjct: 243 ANATVKIEGSNEEKSVATSKKQNKQTGPSIIEQKSDGDECWVPLKYHSCKSDISSRYLQQ 302

Query: 105 MVAHESSPIQFSMSPYDYGCSLFPGTSNDSIGPKG 1
           MV  ESSPI F+M  YDY  +L PG S++++ PKG
Sbjct: 303 MVTQESSPINFTMRAYDYVTALCPGGSSNNL-PKG 336


>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
           gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC5-like [Citrus sinensis]
           gi|557527707|gb|ESR38957.1| hypothetical protein
           CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  303 bits (776), Expect = 2e-79
 Identities = 170/337 (50%), Positives = 218/337 (64%), Gaps = 12/337 (3%)
 Frame = -1

Query: 975 PIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIPLKKNEESDSLPSFVD 796
           P   PSR +RF PK+SK                  A+PQ+    P K   E +   +   
Sbjct: 14  PSQVPSRVSRFLPKSSKL-------VPKPEPPPEKAEPQQ----PKKPKTEDNFQQTTSV 62

Query: 795 SATAKTEYEPSRPSSATAEMDVDGEET---KAEPIQED-------DAEDQVVREIDVFFT 646
           + T KTE   S          V   ET   K EP+  +       D ED +VREIDVFFT
Sbjct: 63  NLTPKTEPSVSNGDVKLESKPVPEPETEPRKEEPVDLNMDELHLQDDEDMIVREIDVFFT 122

Query: 645 PAIDTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDFRT 466
           P+ID +++LYV+QYPLRP WRPYELDE CEEVRVKP+++E+E+DLS+DVDS N+D +  +
Sbjct: 123 PSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKAS 182

Query: 465 R--MAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNA 292
           R  M KQTLST+W P   TGYA+GVL+GNKL LNPIHAVVQLR S   LKSGGSK+KNN 
Sbjct: 183 RLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRKNNV 242

Query: 291 TSSIEATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSASHL 112
            S  E  ++ ED ++ KSV  SKKQN++ G++ EQ  +  ECWVPL+YHGSKS+FSA +L
Sbjct: 243 AS--EIPVKLEDSNQDKSVGSSKKQNKRMGSI-EQRSNEEECWVPLKYHGSKSDFSARYL 299

Query: 111 QKMVAHESSPIQFSMSPYDYGCSLFPGTSNDSIGPKG 1
           Q+M+  E+SPI F+M+PYDY  SL PG  +++   KG
Sbjct: 300 QRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKG 336


>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
           gi|557527706|gb|ESR38956.1| hypothetical protein
           CICLE_v10025048mg [Citrus clementina]
          Length = 637

 Score =  303 bits (776), Expect = 2e-79
 Identities = 170/337 (50%), Positives = 218/337 (64%), Gaps = 12/337 (3%)
 Frame = -1

Query: 975 PIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNLIPLKKNEESDSLPSFVD 796
           P   PSR +RF PK+SK                  A+PQ+    P K   E +   +   
Sbjct: 14  PSQVPSRVSRFLPKSSKL-------VPKPEPPPEKAEPQQ----PKKPKTEDNFQQTTSV 62

Query: 795 SATAKTEYEPSRPSSATAEMDVDGEET---KAEPIQED-------DAEDQVVREIDVFFT 646
           + T KTE   S          V   ET   K EP+  +       D ED +VREIDVFFT
Sbjct: 63  NLTPKTEPSVSNGDVKLESKPVPEPETEPRKEEPVDLNMDELHLQDDEDMIVREIDVFFT 122

Query: 645 PAIDTNTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDFRT 466
           P+ID +++LYV+QYPLRP WRPYELDE CEEVRVKP+++E+E+DLS+DVDS N+D +  +
Sbjct: 123 PSIDADSKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKAS 182

Query: 465 R--MAKQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNA 292
           R  M KQTLST+W P   TGYA+GVL+GNKL LNPIHAVVQLR S   LKSGGSK+KNN 
Sbjct: 183 RLSMPKQTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRKNNV 242

Query: 291 TSSIEATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSASHL 112
            S  E  ++ ED ++ KSV  SKKQN++ G++ EQ  +  ECWVPL+YHGSKS+FSA +L
Sbjct: 243 AS--EIPVKLEDSNQDKSVGSSKKQNKRMGSI-EQRSNEEECWVPLKYHGSKSDFSARYL 299

Query: 111 QKMVAHESSPIQFSMSPYDYGCSLFPGTSNDSIGPKG 1
           Q+M+  E+SPI F+M+PYDY  SL PG  +++   KG
Sbjct: 300 QRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKG 336


>ref|XP_009356672.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
           [Pyrus x bretschneideri]
          Length = 672

 Score =  301 bits (770), Expect = 1e-78
 Identities = 163/325 (50%), Positives = 209/325 (64%), Gaps = 8/325 (2%)
 Frame = -1

Query: 966 APSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQ------ESNLIPLKKNEESDSLPS 805
           APSR  RF P++SK K                ++P+      + +   +KK EE  S P 
Sbjct: 12  APSRPNRFVPRSSKAKPKPKSEPVAKQEPVPKSEPELKPSREDLDAPIVKKKEEEGSAP- 70

Query: 804 FVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPIQEDDAEDQVVREIDVFFTPAIDTNT 625
                    + E S     T   DV  E+   +P++EDD ED+VVREIDVFF P ID N+
Sbjct: 71  ---------KAEDSNGGLKTENGDVSKED---DPMEEDDLEDEVVREIDVFFNPKIDYNS 118

Query: 624 QLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDF--RTRMAKQ 451
           +LYVLQYPLRP WRPYEL+  CEE R+ P ++E+E+DLS+D D KN+D D   R +M KQ
Sbjct: 119 KLYVLQYPLRPWWRPYELESRCEEGRLNPATSEMEIDLSLDRDPKNFDEDCAGRLKMTKQ 178

Query: 450 TLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNATSSIEAT 271
           TLST+WKP  T+GYAVG+LM NKL LNP+HAVVQLRPS  HL SGGSK+KN+     E T
Sbjct: 179 TLSTTWKPPGTSGYAVGILMDNKLHLNPVHAVVQLRPSLAHLNSGGSKRKNSVKGDAEVT 238

Query: 270 IRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSASHLQKMVAHE 91
           ++ ED  + KS+ PSK QN++  +  E+  +  E WVPL+YH S+S+FSA +LQKMV  E
Sbjct: 239 VKLEDSGQEKSIGPSKMQNKRMESSTEKKIEDEESWVPLQYHSSESDFSARYLQKMVGQE 298

Query: 90  SSPIQFSMSPYDYGCSLFPGTSNDS 16
           SSPIQF+MSP+DY  SL P T   S
Sbjct: 299 SSPIQFTMSPHDYVDSLCPRTCEGS 323


>ref|XP_009356671.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
           [Pyrus x bretschneideri]
          Length = 695

 Score =  301 bits (770), Expect = 1e-78
 Identities = 163/325 (50%), Positives = 209/325 (64%), Gaps = 8/325 (2%)
 Frame = -1

Query: 966 APSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQ------ESNLIPLKKNEESDSLPS 805
           APSR  RF P++SK K                ++P+      + +   +KK EE  S P 
Sbjct: 12  APSRPNRFVPRSSKAKPKPKSEPVAKQEPVPKSEPELKPSREDLDAPIVKKKEEEGSAP- 70

Query: 804 FVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPIQEDDAEDQVVREIDVFFTPAIDTNT 625
                    + E S     T   DV  E+   +P++EDD ED+VVREIDVFF P ID N+
Sbjct: 71  ---------KAEDSNGGLKTENGDVSKED---DPMEEDDLEDEVVREIDVFFNPKIDYNS 118

Query: 624 QLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDF--RTRMAKQ 451
           +LYVLQYPLRP WRPYEL+  CEE R+ P ++E+E+DLS+D D KN+D D   R +M KQ
Sbjct: 119 KLYVLQYPLRPWWRPYELESRCEEGRLNPATSEMEIDLSLDRDPKNFDEDCAGRLKMTKQ 178

Query: 450 TLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNATSSIEAT 271
           TLST+WKP  T+GYAVG+LM NKL LNP+HAVVQLRPS  HL SGGSK+KN+     E T
Sbjct: 179 TLSTTWKPPGTSGYAVGILMDNKLHLNPVHAVVQLRPSLAHLNSGGSKRKNSVKGDAEVT 238

Query: 270 IRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSASHLQKMVAHE 91
           ++ ED  + KS+ PSK QN++  +  E+  +  E WVPL+YH S+S+FSA +LQKMV  E
Sbjct: 239 VKLEDSGQEKSIGPSKMQNKRMESSTEKKIEDEESWVPLQYHSSESDFSARYLQKMVGQE 298

Query: 90  SSPIQFSMSPYDYGCSLFPGTSNDS 16
           SSPIQF+MSP+DY  SL P T   S
Sbjct: 299 SSPIQFTMSPHDYVDSLCPRTCEGS 323


>ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
           [Vitis vinifera]
          Length = 677

 Score =  300 bits (767), Expect = 2e-78
 Identities = 178/333 (53%), Positives = 212/333 (63%), Gaps = 7/333 (2%)
 Frame = -1

Query: 978 APIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNL--IPLKKNEESDSLPS 805
           AP+  PSR   FAPK+SK K                +QP+ S L  + L   +E DS P 
Sbjct: 12  APVRRPSR---FAPKSSKPKLIPKPEPS--------SQPEPSKLDDVTLINKKEEDSQPP 60

Query: 804 FVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPIQEDDA-EDQVVREIDVFFTPA-IDT 631
            V  A    E   S   +   EM+V+ +    + ++EDD  ED VVREIDVFFTP   D 
Sbjct: 61  LVKKAD---EPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDD 117

Query: 630 NTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDFRT--RMA 457
           NT++YVLQYPLRP WRPYEL E C+EVRVKP S E+EVDLS+DVDSKNYDPD     RM 
Sbjct: 118 NTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMK 177

Query: 456 KQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNATSSIE 277
           KQTLSTSWKP  TTGY VGVLMGNKL LNPIHAVVQLRPS E+L SGG+K+KNN T    
Sbjct: 178 KQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTN 237

Query: 276 ATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSASHLQKMVA 97
           + ++ E  +E +SV   KKQ+                WVPL+YH S+S+FSA +LQKMVA
Sbjct: 238 SAVKLEVSNEEESVGSLKKQS----------------WVPLKYHSSESDFSARYLQKMVA 281

Query: 96  HESSPIQFSMSPYDYGCSLF-PGTSNDSIGPKG 1
            ++SPIQF MSPY+Y  SL  PG SND    KG
Sbjct: 282 EDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKG 314


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
           [Vitis vinifera]
          Length = 672

 Score =  300 bits (767), Expect = 2e-78
 Identities = 178/333 (53%), Positives = 212/333 (63%), Gaps = 7/333 (2%)
 Frame = -1

Query: 978 APIPAPSRATRFAPKNSKFKXXXXXXXXXXXXXQSPAQPQESNL--IPLKKNEESDSLPS 805
           AP+  PSR   FAPK+SK K                +QP+ S L  + L   +E DS P 
Sbjct: 12  APVRRPSR---FAPKSSKPKLIPKPEPS--------SQPEPSKLDDVTLINKKEEDSQPP 60

Query: 804 FVDSATAKTEYEPSRPSSATAEMDVDGEETKAEPIQEDDA-EDQVVREIDVFFTPA-IDT 631
            V  A    E   S   +   EM+V+ +    + ++EDD  ED VVREIDVFFTP   D 
Sbjct: 61  LVKKAD---EPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDD 117

Query: 630 NTQLYVLQYPLRPCWRPYELDELCEEVRVKPTSTEIEVDLSVDVDSKNYDPDFRT--RMA 457
           NT++YVLQYPLRP WRPYEL E C+EVRVKP S E+EVDLS+DVDSKNYDPD     RM 
Sbjct: 118 NTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMK 177

Query: 456 KQTLSTSWKPTCTTGYAVGVLMGNKLFLNPIHAVVQLRPSTEHLKSGGSKKKNNATSSIE 277
           KQTLSTSWKP  TTGY VGVLMGNKL LNPIHAVVQLRPS E+L SGG+K+KNN T    
Sbjct: 178 KQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTN 237

Query: 276 ATIRSEDLDEVKSVVPSKKQNRQPGNVNEQNKDIGECWVPLRYHGSKSNFSASHLQKMVA 97
           + ++ E  +E +SV   KKQ+                WVPL+YH S+S+FSA +LQKMVA
Sbjct: 238 SAVKLEVSNEEESVGSLKKQS----------------WVPLKYHSSESDFSARYLQKMVA 281

Query: 96  HESSPIQFSMSPYDYGCSLF-PGTSNDSIGPKG 1
            ++SPIQF MSPY+Y  SL  PG SND    KG
Sbjct: 282 EDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKG 314