BLASTX nr result
ID: Cornus23_contig00022718
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cornus23_contig00022718 (534 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_008391223.1| PREDICTED: RNA-binding protein 39-like [Malu... 54 8e-11 gb|KMT09237.1| hypothetical protein BVRB_6g133370 isoform B [Bet... 56 2e-09 gb|KDO57142.1| hypothetical protein CISIN_1g0063802mg, partial [... 54 2e-07 gb|KOM30627.1| hypothetical protein LR48_Vigan01g018100 [Vigna a... 54 7e-06 >ref|XP_008391223.1| PREDICTED: RNA-binding protein 39-like [Malus domestica] Length = 501 Score = 53.9 bits (128), Expect(2) = 8e-11 Identities = 27/28 (96%), Positives = 27/28 (96%) Frame = -1 Query: 534 FSKAGKVRDVRLIMDRNSRRSKGVGIAI 451 FSKAGKVRDVRLIMDRNSRRSKGVG AI Sbjct: 249 FSKAGKVRDVRLIMDRNSRRSKGVGNAI 276 Score = 39.3 bits (90), Expect(2) = 8e-11 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = -2 Query: 425 NTLLSCLFNPCSILKVDDMNLCLFLLPFFLVSAFL 321 NTL SCL N C +LKVDD+NL F+++S FL Sbjct: 283 NTLHSCLINSCCVLKVDDINL------FYILSCFL 311 >gb|KMT09237.1| hypothetical protein BVRB_6g133370 isoform B [Beta vulgaris subsp. vulgaris] Length = 681 Score = 55.8 bits (133), Expect(2) = 2e-09 Identities = 28/29 (96%), Positives = 28/29 (96%) Frame = -1 Query: 534 FSKAGKVRDVRLIMDRNSRRSKGVGIAIK 448 FSKAGKVRDVRLIMDRNSRRSKGVG AIK Sbjct: 297 FSKAGKVRDVRLIMDRNSRRSKGVGNAIK 325 Score = 32.7 bits (73), Expect(2) = 2e-09 Identities = 16/23 (69%), Positives = 18/23 (78%) Frame = -2 Query: 446 IHDEG*WNTLLSCLFNPCSILKV 378 + D+G NTLLSCL N CSILKV Sbjct: 329 MRDDG--NTLLSCLINSCSILKV 349 >gb|KDO57142.1| hypothetical protein CISIN_1g0063802mg, partial [Citrus sinensis] Length = 479 Score = 53.9 bits (128), Expect(2) = 2e-07 Identities = 27/28 (96%), Positives = 27/28 (96%) Frame = -1 Query: 534 FSKAGKVRDVRLIMDRNSRRSKGVGIAI 451 FSKAGKVRDVRLIMDRNSRRSKGVG AI Sbjct: 241 FSKAGKVRDVRLIMDRNSRRSKGVGNAI 268 Score = 27.7 bits (60), Expect(2) = 2e-07 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%) Frame = -2 Query: 446 IHDEG*WNTLLSCLFNPCSILK---VDDMNLCLFLL 348 + D+G NTL SCL N C ++K V ++ + FLL Sbjct: 270 MRDDG--NTLHSCLINSCCVIKFFLVAEVGMVFFLL 303 >gb|KOM30627.1| hypothetical protein LR48_Vigan01g018100 [Vigna angularis] Length = 721 Score = 53.9 bits (128), Expect(2) = 7e-06 Identities = 27/28 (96%), Positives = 27/28 (96%) Frame = -1 Query: 534 FSKAGKVRDVRLIMDRNSRRSKGVGIAI 451 FSKAGKVRDVRLIMDRNSRRSKGVG AI Sbjct: 207 FSKAGKVRDVRLIMDRNSRRSKGVGNAI 234 Score = 22.3 bits (46), Expect(2) = 7e-06 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -2 Query: 425 NTLLSCLFNPCSILKVDDMNLCLFLLP 345 NTL SCL N LK+ +++ FL P Sbjct: 241 NTLHSCLINSSCALKL-ELSALEFLFP 266