BLASTX nr result

ID: Cornus23_contig00022718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00022718
         (534 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008391223.1| PREDICTED: RNA-binding protein 39-like [Malu...    54   8e-11
gb|KMT09237.1| hypothetical protein BVRB_6g133370 isoform B [Bet...    56   2e-09
gb|KDO57142.1| hypothetical protein CISIN_1g0063802mg, partial [...    54   2e-07
gb|KOM30627.1| hypothetical protein LR48_Vigan01g018100 [Vigna a...    54   7e-06

>ref|XP_008391223.1| PREDICTED: RNA-binding protein 39-like [Malus domestica]
          Length = 501

 Score = 53.9 bits (128), Expect(2) = 8e-11
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -1

Query: 534 FSKAGKVRDVRLIMDRNSRRSKGVGIAI 451
           FSKAGKVRDVRLIMDRNSRRSKGVG AI
Sbjct: 249 FSKAGKVRDVRLIMDRNSRRSKGVGNAI 276



 Score = 39.3 bits (90), Expect(2) = 8e-11
 Identities = 19/35 (54%), Positives = 24/35 (68%)
 Frame = -2

Query: 425 NTLLSCLFNPCSILKVDDMNLCLFLLPFFLVSAFL 321
           NTL SCL N C +LKVDD+NL      F+++S FL
Sbjct: 283 NTLHSCLINSCCVLKVDDINL------FYILSCFL 311


>gb|KMT09237.1| hypothetical protein BVRB_6g133370 isoform B [Beta vulgaris subsp.
           vulgaris]
          Length = 681

 Score = 55.8 bits (133), Expect(2) = 2e-09
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -1

Query: 534 FSKAGKVRDVRLIMDRNSRRSKGVGIAIK 448
           FSKAGKVRDVRLIMDRNSRRSKGVG AIK
Sbjct: 297 FSKAGKVRDVRLIMDRNSRRSKGVGNAIK 325



 Score = 32.7 bits (73), Expect(2) = 2e-09
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = -2

Query: 446 IHDEG*WNTLLSCLFNPCSILKV 378
           + D+G  NTLLSCL N CSILKV
Sbjct: 329 MRDDG--NTLLSCLINSCSILKV 349


>gb|KDO57142.1| hypothetical protein CISIN_1g0063802mg, partial [Citrus sinensis]
          Length = 479

 Score = 53.9 bits (128), Expect(2) = 2e-07
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -1

Query: 534 FSKAGKVRDVRLIMDRNSRRSKGVGIAI 451
           FSKAGKVRDVRLIMDRNSRRSKGVG AI
Sbjct: 241 FSKAGKVRDVRLIMDRNSRRSKGVGNAI 268



 Score = 27.7 bits (60), Expect(2) = 2e-07
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = -2

Query: 446 IHDEG*WNTLLSCLFNPCSILK---VDDMNLCLFLL 348
           + D+G  NTL SCL N C ++K   V ++ +  FLL
Sbjct: 270 MRDDG--NTLHSCLINSCCVIKFFLVAEVGMVFFLL 303


>gb|KOM30627.1| hypothetical protein LR48_Vigan01g018100 [Vigna angularis]
          Length = 721

 Score = 53.9 bits (128), Expect(2) = 7e-06
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -1

Query: 534 FSKAGKVRDVRLIMDRNSRRSKGVGIAI 451
           FSKAGKVRDVRLIMDRNSRRSKGVG AI
Sbjct: 207 FSKAGKVRDVRLIMDRNSRRSKGVGNAI 234



 Score = 22.3 bits (46), Expect(2) = 7e-06
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 425 NTLLSCLFNPCSILKVDDMNLCLFLLP 345
           NTL SCL N    LK+ +++   FL P
Sbjct: 241 NTLHSCLINSSCALKL-ELSALEFLFP 266


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