BLASTX nr result

ID: Cornus23_contig00022573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00022573
         (269 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010647203.1| PREDICTED: splicing factor U2af large subuni...   130   4e-28
ref|XP_008225056.1| PREDICTED: splicing factor U2af large subuni...   124   4e-26
gb|KRH64802.1| hypothetical protein GLYMA_04G255700 [Glycine max]     123   6e-26
gb|KRH64801.1| hypothetical protein GLYMA_04G255700 [Glycine max]     123   6e-26
gb|KRH64800.1| hypothetical protein GLYMA_04G255700 [Glycine max]     123   6e-26
ref|XP_009773963.1| PREDICTED: splicing factor U2af large subuni...   121   2e-25
ref|XP_009773962.1| PREDICTED: splicing factor U2af large subuni...   121   2e-25
gb|KRH56452.1| hypothetical protein GLYMA_06G324000 [Glycine max]     120   3e-25
gb|KRH56451.1| hypothetical protein GLYMA_06G324000 [Glycine max]     120   3e-25
gb|KHN20551.1| Splicing factor U2af large subunit A [Glycine soja]    120   3e-25
ref|XP_003527581.1| PREDICTED: splicing factor U2af large subuni...   120   3e-25
ref|XP_010242964.1| PREDICTED: splicing factor U2af large subuni...   120   5e-25
ref|XP_010242963.1| PREDICTED: splicing factor U2af large subuni...   120   5e-25
ref|XP_009337901.1| PREDICTED: splicing factor U2af large subuni...   120   5e-25
ref|XP_009337759.1| PREDICTED: splicing factor U2af large subuni...   120   5e-25
ref|XP_008371353.1| PREDICTED: splicing factor U2af large subuni...   120   5e-25
ref|XP_008371351.1| PREDICTED: splicing factor U2af large subuni...   120   5e-25
gb|KDO75908.1| hypothetical protein CISIN_1g009944mg [Citrus sin...   120   5e-25
ref|XP_006467824.1| PREDICTED: splicing factor U2af large subuni...   120   5e-25
ref|XP_006449312.1| hypothetical protein CICLE_v10014912mg [Citr...   120   5e-25

>ref|XP_010647203.1| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 552

 Score =  130 bits (327), Expect = 4e-28
 Identities = 69/90 (76%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSGQLGG-PQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKRTSGFDMAP VA+L+ G AV G+L G PQ + GM QNM PF  TQ   LGALPLMP Q
Sbjct: 136 SKRTSGFDMAPPVAALLPGAAVPGELPGVPQMVPGMIQNMFPFGATQ---LGALPLMPVQ 192

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
           AMTQQATRHARRVYVGGLPPLANEQ+IATF
Sbjct: 193 AMTQQATRHARRVYVGGLPPLANEQTIATF 222


>ref|XP_008225056.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Prunus mume]
          Length = 524

 Score =  124 bits (310), Expect = 4e-26
 Identities = 65/90 (72%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSGQLGG-PQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKRTSGFDMAP   +++   AVSGQL G PQTM G+ QN+LPF    +    ALPLMPAQ
Sbjct: 104 SKRTSGFDMAPPAGAVLPNAAVSGQLSGIPQTMQGVVQNVLPFGAAHL----ALPLMPAQ 159

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
           AMTQQATRHARRVYVGGLPPLANEQ+IATF
Sbjct: 160 AMTQQATRHARRVYVGGLPPLANEQTIATF 189


>gb|KRH64802.1| hypothetical protein GLYMA_04G255700 [Glycine max]
          Length = 535

 Score =  123 bits (308), Expect = 6e-26
 Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGG-AVSGQLGGPQ-TMSGMFQNMLPFETTQVNQLGALPLMPA 96
           SKRTSGFDMAP  ++++TG  AV+GQ+ G   T+ GMF NM P  T+Q+ Q  ALP+MP 
Sbjct: 193 SKRTSGFDMAPPASAMLTGASAVAGQITGANPTIPGMFPNMFPLATSQMQQFSALPVMPV 252

Query: 95  QAMTQQATRHARRVYVGGLPPLANEQSIATF 3
           QAMTQQATRHARRVYVGGLPP ANEQS+ATF
Sbjct: 253 QAMTQQATRHARRVYVGGLPPTANEQSVATF 283


>gb|KRH64801.1| hypothetical protein GLYMA_04G255700 [Glycine max]
          Length = 535

 Score =  123 bits (308), Expect = 6e-26
 Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGG-AVSGQLGGPQ-TMSGMFQNMLPFETTQVNQLGALPLMPA 96
           SKRTSGFDMAP  ++++TG  AV+GQ+ G   T+ GMF NM P  T+Q+ Q  ALP+MP 
Sbjct: 193 SKRTSGFDMAPPASAMLTGASAVAGQITGANPTIPGMFPNMFPLATSQMQQFSALPVMPV 252

Query: 95  QAMTQQATRHARRVYVGGLPPLANEQSIATF 3
           QAMTQQATRHARRVYVGGLPP ANEQS+ATF
Sbjct: 253 QAMTQQATRHARRVYVGGLPPTANEQSVATF 283


>gb|KRH64800.1| hypothetical protein GLYMA_04G255700 [Glycine max]
          Length = 600

 Score =  123 bits (308), Expect = 6e-26
 Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGG-AVSGQLGGPQ-TMSGMFQNMLPFETTQVNQLGALPLMPA 96
           SKRTSGFDMAP  ++++TG  AV+GQ+ G   T+ GMF NM P  T+Q+ Q  ALP+MP 
Sbjct: 193 SKRTSGFDMAPPASAMLTGASAVAGQITGANPTIPGMFPNMFPLATSQMQQFSALPVMPV 252

Query: 95  QAMTQQATRHARRVYVGGLPPLANEQSIATF 3
           QAMTQQATRHARRVYVGGLPP ANEQS+ATF
Sbjct: 253 QAMTQQATRHARRVYVGGLPPTANEQSVATF 283


>ref|XP_009773963.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Nicotiana sylvestris]
          Length = 539

 Score =  121 bits (304), Expect = 2e-25
 Identities = 60/91 (65%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGA--VSGQLGGPQTMSGMFQNMLPFETTQVNQLGALPLMPA 96
           SKRTSGFDMAP VA+  + GA  V G    PQ++ GM QN+ P +T QVNQLG+ P +P 
Sbjct: 120 SKRTSGFDMAPPVAAAFSSGAEQVLGSSNAPQSIPGMLQNVFPTDTIQVNQLGSFPFLPV 179

Query: 95  QAMTQQATRHARRVYVGGLPPLANEQSIATF 3
           QAM+QQATRHARRVYVGGLPPLANEQ+I+ F
Sbjct: 180 QAMSQQATRHARRVYVGGLPPLANEQTISAF 210


>ref|XP_009773962.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Nicotiana sylvestris]
          Length = 540

 Score =  121 bits (304), Expect = 2e-25
 Identities = 60/91 (65%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGA--VSGQLGGPQTMSGMFQNMLPFETTQVNQLGALPLMPA 96
           SKRTSGFDMAP VA+  + GA  V G    PQ++ GM QN+ P +T QVNQLG+ P +P 
Sbjct: 120 SKRTSGFDMAPPVAAAFSSGAEQVLGSSNAPQSIPGMLQNVFPTDTIQVNQLGSFPFLPV 179

Query: 95  QAMTQQATRHARRVYVGGLPPLANEQSIATF 3
           QAM+QQATRHARRVYVGGLPPLANEQ+I+ F
Sbjct: 180 QAMSQQATRHARRVYVGGLPPLANEQTISAF 210


>gb|KRH56452.1| hypothetical protein GLYMA_06G324000 [Glycine max]
          Length = 540

 Score =  120 bits (302), Expect = 3e-25
 Identities = 61/91 (67%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGG-AVSGQLGGPQ-TMSGMFQNMLPFETTQVNQLGALPLMPA 96
           SKRTSGFDMAP  ++++ G  AV+GQ+ G   T+ GMF NM P  T Q+ Q  ALP+MP 
Sbjct: 198 SKRTSGFDMAPPASAMLAGASAVAGQITGANPTIPGMFPNMFPLATNQMQQFSALPVMPV 257

Query: 95  QAMTQQATRHARRVYVGGLPPLANEQSIATF 3
           QAMTQQATRHARRVYVGGLPP ANEQS+ATF
Sbjct: 258 QAMTQQATRHARRVYVGGLPPTANEQSVATF 288


>gb|KRH56451.1| hypothetical protein GLYMA_06G324000 [Glycine max]
          Length = 540

 Score =  120 bits (302), Expect = 3e-25
 Identities = 61/91 (67%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGG-AVSGQLGGPQ-TMSGMFQNMLPFETTQVNQLGALPLMPA 96
           SKRTSGFDMAP  ++++ G  AV+GQ+ G   T+ GMF NM P  T Q+ Q  ALP+MP 
Sbjct: 198 SKRTSGFDMAPPASAMLAGASAVAGQITGANPTIPGMFPNMFPLATNQMQQFSALPVMPV 257

Query: 95  QAMTQQATRHARRVYVGGLPPLANEQSIATF 3
           QAMTQQATRHARRVYVGGLPP ANEQS+ATF
Sbjct: 258 QAMTQQATRHARRVYVGGLPPTANEQSVATF 288


>gb|KHN20551.1| Splicing factor U2af large subunit A [Glycine soja]
          Length = 603

 Score =  120 bits (302), Expect = 3e-25
 Identities = 61/91 (67%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGG-AVSGQLGGPQ-TMSGMFQNMLPFETTQVNQLGALPLMPA 96
           SKRTSGFDMAP  ++++ G  AV+GQ+ G   T+ GMF NM P  T Q+ Q  ALP+MP 
Sbjct: 196 SKRTSGFDMAPPASAMLAGASAVAGQITGANPTIPGMFPNMFPLATNQMQQFSALPVMPV 255

Query: 95  QAMTQQATRHARRVYVGGLPPLANEQSIATF 3
           QAMTQQATRHARRVYVGGLPP ANEQS+ATF
Sbjct: 256 QAMTQQATRHARRVYVGGLPPTANEQSVATF 286


>ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Glycine max] gi|947108067|gb|KRH56450.1| hypothetical
           protein GLYMA_06G324000 [Glycine max]
          Length = 605

 Score =  120 bits (302), Expect = 3e-25
 Identities = 61/91 (67%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGG-AVSGQLGGPQ-TMSGMFQNMLPFETTQVNQLGALPLMPA 96
           SKRTSGFDMAP  ++++ G  AV+GQ+ G   T+ GMF NM P  T Q+ Q  ALP+MP 
Sbjct: 198 SKRTSGFDMAPPASAMLAGASAVAGQITGANPTIPGMFPNMFPLATNQMQQFSALPVMPV 257

Query: 95  QAMTQQATRHARRVYVGGLPPLANEQSIATF 3
           QAMTQQATRHARRVYVGGLPP ANEQS+ATF
Sbjct: 258 QAMTQQATRHARRVYVGGLPPTANEQSVATF 288


>ref|XP_010242964.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
           [Nelumbo nucifera]
          Length = 555

 Score =  120 bits (300), Expect = 5e-25
 Identities = 63/90 (70%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSG-QLGGPQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKR SGFDMAP  A+++ G A  G QLG PQT  GM  NM PF TTQ   LG +PL+P Q
Sbjct: 144 SKRQSGFDMAPPGAAMLPGAAAPGAQLGVPQTTPGMLPNMFPFGTTQ---LGTIPLVPPQ 200

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
           AMTQQATRHARRVYVGGLPP+ANEQ+IATF
Sbjct: 201 AMTQQATRHARRVYVGGLPPMANEQTIATF 230


>ref|XP_010242963.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Nelumbo nucifera]
          Length = 556

 Score =  120 bits (300), Expect = 5e-25
 Identities = 63/90 (70%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSG-QLGGPQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKR SGFDMAP  A+++ G A  G QLG PQT  GM  NM PF TTQ   LG +PL+P Q
Sbjct: 144 SKRQSGFDMAPPGAAMLPGAAAPGAQLGVPQTTPGMLPNMFPFGTTQ---LGTIPLVPPQ 200

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
           AMTQQATRHARRVYVGGLPP+ANEQ+IATF
Sbjct: 201 AMTQQATRHARRVYVGGLPPMANEQTIATF 230


>ref|XP_009337901.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
           [Pyrus x bretschneideri]
          Length = 521

 Score =  120 bits (300), Expect = 5e-25
 Identities = 64/90 (71%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSGQLGG-PQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKRTSGFDMAP   S++    VSGQL G PQ M G+ QN LPF  + +    ALPLMPAQ
Sbjct: 106 SKRTSGFDMAPPAGSVLPNAPVSGQLSGIPQMMPGVVQNSLPFGASHM----ALPLMPAQ 161

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
           AMTQQATRHARRVYVGGLPPLANEQ+IATF
Sbjct: 162 AMTQQATRHARRVYVGGLPPLANEQTIATF 191


>ref|XP_009337759.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Pyrus x bretschneideri]
          Length = 526

 Score =  120 bits (300), Expect = 5e-25
 Identities = 64/90 (71%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSGQLGG-PQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKRTSGFDMAP   S++    VSGQL G PQ M G+ QN LPF  + +    ALPLMPAQ
Sbjct: 106 SKRTSGFDMAPPAGSVLPNAPVSGQLSGIPQMMPGVVQNSLPFGASHM----ALPLMPAQ 161

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
           AMTQQATRHARRVYVGGLPPLANEQ+IATF
Sbjct: 162 AMTQQATRHARRVYVGGLPPLANEQTIATF 191


>ref|XP_008371353.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
           [Malus domestica]
          Length = 518

 Score =  120 bits (300), Expect = 5e-25
 Identities = 64/90 (71%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSGQLGG-PQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKRTSGFDMAP   S++    VSGQL G PQ M G+ QN LPF  + +    ALPLMPAQ
Sbjct: 103 SKRTSGFDMAPPAGSVLPNAPVSGQLSGIPQMMPGVVQNSLPFGASHM----ALPLMPAQ 158

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
           AMTQQATRHARRVYVGGLPPLANEQ+IATF
Sbjct: 159 AMTQQATRHARRVYVGGLPPLANEQTIATF 188


>ref|XP_008371351.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
           [Malus domestica]
          Length = 523

 Score =  120 bits (300), Expect = 5e-25
 Identities = 64/90 (71%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSGQLGG-PQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKRTSGFDMAP   S++    VSGQL G PQ M G+ QN LPF  + +    ALPLMPAQ
Sbjct: 103 SKRTSGFDMAPPAGSVLPNAPVSGQLSGIPQMMPGVVQNSLPFGASHM----ALPLMPAQ 158

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
           AMTQQATRHARRVYVGGLPPLANEQ+IATF
Sbjct: 159 AMTQQATRHARRVYVGGLPPLANEQTIATF 188


>gb|KDO75908.1| hypothetical protein CISIN_1g009944mg [Citrus sinensis]
          Length = 521

 Score =  120 bits (300), Expect = 5e-25
 Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSGQLGG-PQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKR SGFDMAP  A+++ G AV GQL G P  +  M QNMLPF  TQ   LGA PLMP Q
Sbjct: 108 SKRRSGFDMAPPAAAMLPGAAVPGQLPGVPSAVPEMAQNMLPFGATQ---LGAFPLMPVQ 164

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
            MTQQATRHARRVYVGGLPPLANEQ+IATF
Sbjct: 165 VMTQQATRHARRVYVGGLPPLANEQAIATF 194


>ref|XP_006467824.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
           [Citrus sinensis] gi|641857143|gb|KDO75909.1|
           hypothetical protein CISIN_1g009944mg [Citrus sinensis]
          Length = 522

 Score =  120 bits (300), Expect = 5e-25
 Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSGQLGG-PQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKR SGFDMAP  A+++ G AV GQL G P  +  M QNMLPF  TQ   LGA PLMP Q
Sbjct: 108 SKRRSGFDMAPPAAAMLPGAAVPGQLPGVPSAVPEMAQNMLPFGATQ---LGAFPLMPVQ 164

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
            MTQQATRHARRVYVGGLPPLANEQ+IATF
Sbjct: 165 VMTQQATRHARRVYVGGLPPLANEQAIATF 194


>ref|XP_006449312.1| hypothetical protein CICLE_v10014912mg [Citrus clementina]
           gi|568826938|ref|XP_006467825.1| PREDICTED: splicing
           factor U2af large subunit A-like isoform X2 [Citrus
           sinensis] gi|557551923|gb|ESR62552.1| hypothetical
           protein CICLE_v10014912mg [Citrus clementina]
           gi|641857145|gb|KDO75911.1| hypothetical protein
           CISIN_1g009944mg [Citrus sinensis]
          Length = 435

 Score =  120 bits (300), Expect = 5e-25
 Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
 Frame = -1

Query: 269 SKRTSGFDMAPAVASLMTGGAVSGQLGG-PQTMSGMFQNMLPFETTQVNQLGALPLMPAQ 93
           SKR SGFDMAP  A+++ G AV GQL G P  +  M QNMLPF  TQ   LGA PLMP Q
Sbjct: 108 SKRRSGFDMAPPAAAMLPGAAVPGQLPGVPSAVPEMAQNMLPFGATQ---LGAFPLMPVQ 164

Query: 92  AMTQQATRHARRVYVGGLPPLANEQSIATF 3
            MTQQATRHARRVYVGGLPPLANEQ+IATF
Sbjct: 165 VMTQQATRHARRVYVGGLPPLANEQAIATF 194


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