BLASTX nr result
ID: Cornus23_contig00022488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00022488
(580 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002535497.1| conserved hypothetical protein [Ricinus comm... 70 3e-29
ref|XP_011101728.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 63 1e-19
ref|XP_012839874.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 65 5e-17
gb|AAZ03964.1| Ycf3 [Ranunculus macranthus] 89 2e-15
gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast)... 88 3e-15
ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) ... 87 5e-15
ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana] ... 63 5e-15
ref|YP_009139469.1| hypothetical chloroplast RF34 (chloroplast) ... 87 6e-15
emb|CDP56658.1| photosystem I assembly related protein Ycf3 [Sta... 87 6e-15
ref|YP_005089148.1| ycf3 gene product [Rhynchoryza subulata] gi|... 87 8e-15
ref|YP_005088011.1| ycf3 gene product [Leersia tisserantii] gi|3... 87 8e-15
gb|AGP50756.1| hypothetical chloroplast RF34 (chloroplast) [Hord... 86 1e-14
ref|YP_009179057.1| photosystem I assembly protein Ycf3 (chlorop... 86 1e-14
ref|YP_009169766.1| photosystem I assembly protein Ycf3 (chlorop... 86 1e-14
ref|YP_009166126.1| Ycf3 (chloroplast) [Zanthoxylum piperitum] g... 86 1e-14
ref|YP_009164319.1| Ycf3 (chloroplast) [Bupleurum falcatum] gi|7... 86 1e-14
gb|AKZ24471.1| photosystem I assembly protein Ycf3 (plastid) [Im... 86 1e-14
gb|AKZ24452.1| photosystem I assembly protein Ycf3 (plastid) [El... 86 1e-14
ref|YP_009132837.1| photosystem I assembly protein Ycf3 (chlorop... 86 1e-14
ref|YP_009130323.1| photosystem I assembly protein Ycf3 (chlorop... 86 1e-14
>ref|XP_002535497.1| conserved hypothetical protein [Ricinus communis]
gi|223522895|gb|EEF26886.1| conserved hypothetical
protein [Ricinus communis]
Length = 110
Score = 70.5 bits (171), Expect(4) = 3e-29
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRI GN IDKTF VA ILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 2 PRSRITGNSIDKTF--VAKILLRIIPTTSGEKEAFTYYRDGEV 42
Score = 62.0 bits (149), Expect(4) = 3e-29
Identities = 36/53 (67%), Positives = 37/53 (69%)
Frame = -3
Query: 281 ASIVDSSIERKVTPIGSVLQVNPPPLVPIGGIGEEALHLGINNAKTLL*MTPF 123
ASIVDSSIERKV NP PLVPIGGI EEAL LGINN K LL + PF
Sbjct: 61 ASIVDSSIERKV---------NPTPLVPIGGIKEEALRLGINNTKPLLEIFPF 104
Score = 40.4 bits (93), Expect(4) = 3e-29
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -1
Query: 352 EGEVLK*NNSFCRVSSINAASDAML 278
+GEV K NNSFCRVS INAASDA +
Sbjct: 39 DGEVYKENNSFCRVSPINAASDASI 63
Score = 23.1 bits (48), Expect(4) = 3e-29
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 129 PFPYWTRD 106
PFPYW RD
Sbjct: 103 PFPYWDRD 110
>ref|XP_011101728.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC105179794 [Sesamum indicum]
Length = 66
Score = 63.2 bits (152), Expect(2) = 1e-19
Identities = 27/34 (79%), Positives = 27/34 (79%)
Frame = -3
Query: 128 PFLIGLGTNKNGWDNKHPSRSYFGYPYNHRRLLK 27
PF G KNGWDNKHPSRSYFGY YNHRRLLK
Sbjct: 33 PFPYGARDXKNGWDNKHPSRSYFGYQYNHRRLLK 66
Score = 60.1 bits (144), Expect(2) = 1e-19
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -2
Query: 222 GQSSSTSTNRWHRGRSTTPRNQQRENFVINDPFPYWTRD 106
GQS ST+TN H+GRSTTPRNQQ EN V N PFPY RD
Sbjct: 2 GQSYSTNTNGQHKGRSTTPRNQQHENLVRNYPFPYGARD 40
>ref|XP_012839874.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC105960252 [Erythranthe guttatus]
Length = 67
Score = 64.7 bits (156), Expect(2) = 5e-17
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = -3
Query: 122 LIGLGTNKNGWDNKHPSRSYFGYPYNHRRLLK 27
L+G G KNGWDNKHPSRSYFGY YNHRRLLK
Sbjct: 36 LLGSGLXKNGWDNKHPSRSYFGYQYNHRRLLK 67
Score = 50.1 bits (118), Expect(2) = 5e-17
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -2
Query: 222 GQSSSTSTNRWHRGRSTTPRNQQRENFVINDP 127
GQS STSTNR H+GRSTTPRNQQ EN N P
Sbjct: 2 GQSYSTSTNRQHKGRSTTPRNQQHENLGRNYP 33
>gb|AAZ03964.1| Ycf3 [Ranunculus macranthus]
Length = 170
Score = 88.6 bits (218), Expect = 2e-15
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 44
>gb|AGJ51257.1| photosystem I assembly protein Ycf3 (chloroplast) [Solanum
carolinense]
Length = 44
Score = 88.2 bits (217), Expect = 3e-15
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLR+IPTTSGEKEAFTYYRDGAI
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDGAI 44
>ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) [Penthorum chinense]
gi|403226782|gb|AFR25661.1| hypothetical chloroplast
RF34 (chloroplast) [Penthorum chinense]
Length = 169
Score = 87.4 bits (215), Expect = 5e-15
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGA+
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAM 44
>ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana]
gi|330251116|gb|AEC06210.1| uncharacterized protein
AT2G12905 [Arabidopsis thaliana]
Length = 72
Score = 63.2 bits (152), Expect(2) = 5e-15
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -3
Query: 125 FLIGLGTNKNGWDNKHPSRSYFGYPYNH 42
F +G+GTN+NGW+NKHPSRSYFGYPYNH
Sbjct: 45 FFVGIGTNQNGWNNKHPSRSYFGYPYNH 72
Score = 44.7 bits (104), Expect(2) = 5e-15
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -2
Query: 201 TNRWHRGRSTTPRNQQRENFVINDPFPYW 115
TNR HRGRSTTPRNQQ +NF+ ND ++
Sbjct: 16 TNRRHRGRSTTPRNQQHKNFLKNDSLSFF 44
>ref|YP_009139469.1| hypothetical chloroplast RF34 (chloroplast) [Dunalia solanacea]
gi|817597853|gb|AKF78413.1| hypothetical chloroplast
RF34 (chloroplast) [Dunalia solanacea]
Length = 157
Score = 87.0 bits (214), Expect = 6e-15
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLR+IPTTSGEKEAFTYYRDGA+
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRVIPTTSGEKEAFTYYRDGAM 44
>emb|CDP56658.1| photosystem I assembly related protein Ycf3 [Staphylococcus aureus
subsp. aureus]
Length = 44
Score = 87.0 bits (214), Expect = 6e-15
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRS+INGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI
Sbjct: 2 PRSQINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 44
>ref|YP_005089148.1| ycf3 gene product [Rhynchoryza subulata]
gi|669136046|ref|YP_009049270.1| hypothetical
chloroplast RF34 (chloroplast) [Oryza australiensis]
gi|910354928|ref|YP_009161191.1| Ycf3 (chloroplast)
[Oryza punctata] gi|910355256|ref|YP_009161365.1| Ycf3
(chloroplast) [Oryza sativa Indica Group]
gi|346228473|gb|AEO21345.1| hypothetical chloroplast
RF34 (plastid) [Rhynchoryza subulata]
gi|353685054|gb|AER12819.1| hypothetical chloroplast
RF34 (chloroplast) [Oryza sativa Indica Group]
gi|353685142|gb|AER12906.1| hypothetical chloroplast
RF34 (chloroplast) [Oryza sativa Indica Group]
gi|555945989|gb|AGZ19215.1| hypothetical chloroplast
RF34 (chloroplast) [Oryza rufipogon]
gi|662117290|gb|AIE44576.1| hypothetical chloroplast
RF34 (chloroplast) [Oryza australiensis]
gi|743432624|gb|AJC09142.1| Ycf3 (chloroplast) [Oryza
sativa] gi|743432746|gb|AJC09241.1| Ycf3 (chloroplast)
[Oryza sativa] gi|743432854|gb|AJC09340.1| Ycf3
(chloroplast) [Oryza sativa] gi|743432971|gb|AJC09440.1|
Ycf3 (chloroplast) [Oryza glaberrima]
gi|743433097|gb|AJC09540.1| Ycf3 (chloroplast) [Oryza
barthii] gi|743433220|gb|AJC09640.1| Ycf3 (chloroplast)
[Oryza rufipogon] gi|743433345|gb|AJC09740.1| Ycf3
(chloroplast) [Oryza meridionalis]
gi|743433472|gb|AJC09840.1| Ycf3 (chloroplast) [Oryza
glumipatula] gi|743433596|gb|AJC09940.1| Ycf3
(chloroplast) [Oryza punctata]
gi|743433819|gb|AJC10114.1| Ycf3 (chloroplast) [Oryza
glaberrima] gi|743433944|gb|AJC10214.1| Ycf3
(chloroplast) [Oryza barthii]
gi|743434071|gb|AJC10314.1| Ycf3 (chloroplast) [Oryza
barthii] gi|743434198|gb|AJC10414.1| Ycf3 (chloroplast)
[Oryza barthii] gi|743434326|gb|AJC10514.1| Ycf3
(chloroplast) [Oryza barthii]
gi|743434445|gb|AJC10614.1| Ycf3 (chloroplast) [Oryza
sativa Indica Group] gi|744671478|gb|AJC99314.1| Ycf3
(chloroplast) [Oryza sativa Japonica Group]
gi|744671590|gb|AJC99403.1| Ycf3 (chloroplast) [Oryza
sativa Japonica Group] gi|744672025|gb|AJC99744.1| Ycf3
(chloroplast) [Oryza glaberrima]
gi|744672152|gb|AJC99844.1| Ycf3 (chloroplast) [Oryza
nivara] gi|744672275|gb|AJC99944.1| Ycf3 (chloroplast)
[Oryza barthii] gi|744672401|gb|AJD00045.1| Ycf3
(chloroplast) [Oryza longistaminata]
Length = 172
Score = 86.7 bits (213), Expect = 8e-15
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEK AFTYYRDGAI
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDGAI 44
>ref|YP_005088011.1| ycf3 gene product [Leersia tisserantii] gi|346228305|gb|AEO21179.1|
hypothetical chloroplast RF34 (plastid) [Leersia
tisserantii]
Length = 172
Score = 86.7 bits (213), Expect = 8e-15
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEK AFTYYRDGAI
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKRAFTYYRDGAI 44
>gb|AGP50756.1| hypothetical chloroplast RF34 (chloroplast) [Hordeum vulgare subsp.
vulgare] gi|521301030|gb|AGP50832.1| hypothetical
chloroplast RF34 (chloroplast) [Hordeum vulgare subsp.
spontaneum] gi|521301111|gb|AGP50912.1| hypothetical
chloroplast RF34 (chloroplast) [Hordeum vulgare subsp.
spontaneum]
Length = 172
Score = 86.3 bits (212), Expect = 1e-14
Identities = 40/43 (93%), Positives = 43/43 (100%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSR+NGNFIDKTFSI+ANILLRIIPTTSGEK+AFTYYRDGAI
Sbjct: 2 PRSRVNGNFIDKTFSIIANILLRIIPTTSGEKKAFTYYRDGAI 44
>ref|YP_009179057.1| photosystem I assembly protein Ycf3 (chloroplast) [Ostrya
rehderiana] gi|940813729|gb|ALK26629.1| photosystem I
assembly protein Ycf3 (chloroplast) [Ostrya rehderiana]
Length = 169
Score = 85.9 bits (211), Expect = 1e-14
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGGM 44
>ref|YP_009169766.1| photosystem I assembly protein Ycf3 (chloroplast) [Morinda
officinalis] gi|927029366|gb|ALD61662.1| photosystem I
assembly protein Ycf3 (chloroplast) [Morinda
officinalis]
Length = 169
Score = 85.9 bits (211), Expect = 1e-14
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGGM 44
>ref|YP_009166126.1| Ycf3 (chloroplast) [Zanthoxylum piperitum]
gi|918056426|gb|AKZ89323.1| Ycf3 (chloroplast)
[Zanthoxylum piperitum]
Length = 169
Score = 85.9 bits (211), Expect = 1e-14
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAF+YYRDGA+
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFSYYRDGAM 44
>ref|YP_009164319.1| Ycf3 (chloroplast) [Bupleurum falcatum] gi|728802686|gb|AIY72305.1|
Ycf3 (chloroplast) [Bupleurum falcatum]
Length = 169
Score = 85.9 bits (211), Expect = 1e-14
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGVM 44
>gb|AKZ24471.1| photosystem I assembly protein Ycf3 (plastid) [Impatiens capensis]
Length = 168
Score = 85.9 bits (211), Expect = 1e-14
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGML 44
>gb|AKZ24452.1| photosystem I assembly protein Ycf3 (plastid) [Ellisia nyctelea]
Length = 169
Score = 85.9 bits (211), Expect = 1e-14
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAF+YYRDGA+
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFSYYRDGAM 44
>ref|YP_009132837.1| photosystem I assembly protein Ycf3 (chloroplast) [Quercus spinosa]
gi|800876831|gb|AKA66964.1| photosystem I assembly
protein Ycf3 (chloroplast) [Quercus spinosa]
Length = 169
Score = 85.9 bits (211), Expect = 1e-14
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGGM 44
>ref|YP_009130323.1| photosystem I assembly protein Ycf3 (chloroplast) [Quercus aliena]
gi|813428103|ref|YP_009133056.1| photosystem I assembly
protein Ycf3 (chloroplast) [Quercus aquifolioides]
gi|769471228|gb|AJW60149.1| photosystem I assembly
protein Ycf3 (chloroplast) [Quercus aliena]
gi|806935431|gb|AKC05470.1| photosystem I assembly
protein Ycf3 (chloroplast) [Quercus aquifolioides]
Length = 169
Score = 85.9 bits (211), Expect = 1e-14
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = -2
Query: 579 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGAI 451
PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDG +
Sbjct: 2 PRSRINGNFIDKTFSIVANILLRIIPTTSGEKEAFTYYRDGGM 44