BLASTX nr result

ID: Cornus23_contig00022092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cornus23_contig00022092
         (809 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010648403.1| PREDICTED: nucleolin 2 isoform X2 [Vitis vin...    75   6e-11
ref|XP_010648407.1| PREDICTED: nucleolin 1 isoform X3 [Vitis vin...    75   7e-11
ref|XP_010648398.1| PREDICTED: nucleolin 2 isoform X1 [Vitis vin...    74   1e-10
emb|CBI27136.3| unnamed protein product [Vitis vinifera]               74   1e-10

>ref|XP_010648403.1| PREDICTED: nucleolin 2 isoform X2 [Vitis vinifera]
          Length = 708

 Score = 75.1 bits (183), Expect = 6e-11
 Identities = 71/219 (32%), Positives = 90/219 (41%), Gaps = 14/219 (6%)
 Frame = -3

Query: 627 RTSTNVAFQSKKSPATA--AKNGSVVVFKKKEMXXXXXXXXXXXXXXXENHAKVTSQAKK 454
           + +  V+ Q KK PATA  AKNGSVV  KKKE                E  +KV SQAKK
Sbjct: 179 KEANKVSSQPKKLPATAKAAKNGSVVAPKKKEESSDSSDSDSSSDEEDEKASKVASQAKK 238

Query: 453 LPTSAPKNVPMLAFKEGXXXXXXXXXXXXXXXXXXTAAAPTKKVNXXXXXXXXXSKEEEA 274
           LP S+ KNVP+                          AAP K  +          +EE A
Sbjct: 239 LPPSSQKNVPV--------------------------AAPKKAESSDSSDESDSDEEEPA 272

Query: 273 PTKRVFPSKRPISA------------NETKESKQQKKEDLKEDGTXXXXXXXXXXXERQK 130
             K V  +K  I+A            +ET   +++KK   KED +             QK
Sbjct: 273 AAKNVAAAKNVIAAAPKKKVQSSDSSSETSSEEEEKKPAPKEDSSEDDSSDESDEEP-QK 331

Query: 129 KKMKVLPTGAPIAGKQSAKATKSGDSSDEEISDNEPKVQ 13
           KK+KV  +    AGK S+   +S DS DE      PK Q
Sbjct: 332 KKLKVPASVPSNAGKSSSSEEESSDSEDEPSKIPLPKKQ 370


>ref|XP_010648407.1| PREDICTED: nucleolin 1 isoform X3 [Vitis vinifera]
          Length = 699

 Score = 74.7 bits (182), Expect = 7e-11
 Identities = 70/217 (32%), Positives = 88/217 (40%), Gaps = 12/217 (5%)
 Frame = -3

Query: 627 RTSTNVAFQSKKSPATA--AKNGSVVVFKKKEMXXXXXXXXXXXXXXXENHAKVTSQAKK 454
           + +  V+ Q KK PATA  AKNGSVV  KKKE                E  +KV SQAKK
Sbjct: 167 KEANKVSSQPKKLPATAKAAKNGSVVAPKKKEESSDSSDSDSSSDEEDEKASKVASQAKK 226

Query: 453 LPTSAPKNVPMLAFKEGXXXXXXXXXXXXXXXXXXT----------AAAPTKKVNXXXXX 304
           LP S+ KNVP+ A K+                              AAAP KKV      
Sbjct: 227 LPPSSQKNVPVAAPKKAESSDSSDESDSDEEEPAAAKNVAAAKNVIAAAPKKKVQSSDSS 286

Query: 303 XXXXSKEEEAPTKRVFPSKRPISANETKESKQQKKEDLKEDGTXXXXXXXXXXXERQKKK 124
               S+EEE P K+  P +     + + ES ++                       QKKK
Sbjct: 287 SETSSEEEEEPQKKPAPKEDSSEDDSSDESDEEP----------------------QKKK 324

Query: 123 MKVLPTGAPIAGKQSAKATKSGDSSDEEISDNEPKVQ 13
           +KV  +    AGK S+   +S DS DE      PK Q
Sbjct: 325 LKVPASVPSNAGKSSSSEEESSDSEDEPSKIPLPKKQ 361


>ref|XP_010648398.1| PREDICTED: nucleolin 2 isoform X1 [Vitis vinifera]
          Length = 710

 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 72/223 (32%), Positives = 91/223 (40%), Gaps = 14/223 (6%)
 Frame = -3

Query: 627 RTSTNVAFQSKKSPATA--AKNGSVVVFKKKEMXXXXXXXXXXXXXXXENHAKVTSQAKK 454
           + +  V+ Q KK PATA  AKNGSVV  KKKE                E  +KV SQAKK
Sbjct: 179 KEANKVSSQPKKLPATAKAAKNGSVVAPKKKEESSDSSDSDSSSDEEDEKASKVASQAKK 238

Query: 453 LPTSAPKNVPMLAFKEG----------XXXXXXXXXXXXXXXXXXTAAAPTKKVNXXXXX 304
           LP S+ KNVP+ A K+                              AAAP KKV      
Sbjct: 239 LPPSSQKNVPVAAPKKAESSDSSDESDSDEEEPAAAKNVAAAKNVIAAAPKKKVQSSDSS 298

Query: 303 XXXXSKEEEAPTKRVFPSKRPISANETKESKQQKKEDLKEDGTXXXXXXXXXXXERQKKK 124
               S+EEE P K+  P +     + + ES ++                       QKKK
Sbjct: 299 SETSSEEEEEPQKKPAPKEDSSEDDSSDESDEEP----------------------QKKK 336

Query: 123 MKVLPTGAPIAGKQSAKATKSGDSSDEEISDNEPK--VQLVKK 1
           +KV  +    AGK S+   +S DS DE      PK   Q+ KK
Sbjct: 337 LKVPASVPSNAGKSSSSEEESSDSEDEPSKIPLPKKATQVSKK 379


>emb|CBI27136.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 72/223 (32%), Positives = 91/223 (40%), Gaps = 14/223 (6%)
 Frame = -3

Query: 627 RTSTNVAFQSKKSPATA--AKNGSVVVFKKKEMXXXXXXXXXXXXXXXENHAKVTSQAKK 454
           + +  V+ Q KK PATA  AKNGSVV  KKKE                E  +KV SQAKK
Sbjct: 179 KEANKVSSQPKKLPATAKAAKNGSVVAPKKKEESSDSSDSDSSSDEEDEKASKVASQAKK 238

Query: 453 LPTSAPKNVPMLAFKEG----------XXXXXXXXXXXXXXXXXXTAAAPTKKVNXXXXX 304
           LP S+ KNVP+ A K+                              AAAP KKV      
Sbjct: 239 LPPSSQKNVPVAAPKKAESSDSSDESDSDEEEPAAAKNVAAAKNVIAAAPKKKVQSSDSS 298

Query: 303 XXXXSKEEEAPTKRVFPSKRPISANETKESKQQKKEDLKEDGTXXXXXXXXXXXERQKKK 124
               S+EEE P K+  P +     + + ES ++                       QKKK
Sbjct: 299 SETSSEEEEEPQKKPAPKEDSSEDDSSDESDEEP----------------------QKKK 336

Query: 123 MKVLPTGAPIAGKQSAKATKSGDSSDEEISDNEPK--VQLVKK 1
           +KV  +    AGK S+   +S DS DE      PK   Q+ KK
Sbjct: 337 LKVPASVPSNAGKSSSSEEESSDSEDEPSKIPLPKKATQVSKK 379


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