BLASTX nr result
ID: Cornus23_contig00022081
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cornus23_contig00022081
(375 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [... 80 6e-13
ref|XP_002317931.1| muts homolog 2 family protein [Populus trich... 80 8e-13
ref|XP_012092958.1| PREDICTED: DNA mismatch repair protein MSH2 ... 79 2e-12
ref|XP_010663546.1| PREDICTED: DNA mismatch repair protein MSH2 ... 78 2e-12
ref|XP_010663545.1| PREDICTED: DNA mismatch repair protein MSH2 ... 78 2e-12
ref|XP_008374721.1| PREDICTED: DNA mismatch repair protein MSH2 ... 78 3e-12
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu... 78 3e-12
gb|AFD23453.1| mismatch repair protein, partial [Solanum cheesma... 78 3e-12
ref|XP_011009801.1| PREDICTED: DNA mismatch repair protein MSH2 ... 77 4e-12
ref|XP_009627423.1| PREDICTED: DNA mismatch repair protein MSH2 ... 77 5e-12
emb|CDO98471.1| unnamed protein product [Coffea canephora] 77 5e-12
gb|AEX14534.1| mismatch repair protein [Solanum habrochaites] 77 5e-12
gb|AFD23456.1| mismatch repair protein, partial [Solanum corneli... 76 1e-11
gb|AFD23454.1| mismatch repair protein, partial [Solanum chilense] 76 1e-11
ref|XP_011648756.1| PREDICTED: DNA mismatch repair protein MSH2 ... 75 1e-11
ref|XP_006354733.1| PREDICTED: DNA mismatch repair protein MSH2-... 75 1e-11
ref|XP_009346787.1| PREDICTED: DNA mismatch repair protein MSH2-... 75 2e-11
ref|XP_008244032.1| PREDICTED: DNA mismatch repair protein MSH2 ... 75 2e-11
ref|XP_009798771.1| PREDICTED: DNA mismatch repair protein MSH2 ... 75 2e-11
ref|XP_007209075.1| hypothetical protein PRUPE_ppa000981mg [Prun... 74 3e-11
>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
MSH2, putative [Ricinus communis]
Length = 936
Score = 80.1 bits (196), Expect = 6e-13
Identities = 48/98 (48%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEIG------YETDADGIERLRTNRALWG---HYA 116
HD C + R +N RDL ++G E D + G YA
Sbjct: 208 HDALTRCGVMLTERKKNEFKTRDLVEDLGRLVKGSIEPVRDLVSGFEFAPGALGALLSYA 267
Query: 115 ELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
ELLADESNYGNYT+R+YNLDSYMRLDSAA RALNV+ES
Sbjct: 268 ELLADESNYGNYTIRKYNLDSYMRLDSAAMRALNVLES 305
>ref|XP_002317931.1| muts homolog 2 family protein [Populus trichocarpa]
gi|222858604|gb|EEE96151.1| muts homolog 2 family
protein [Populus trichocarpa]
Length = 944
Score = 79.7 bits (195), Expect = 8e-13
Identities = 48/98 (48%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEIG------YETDADGIERLRTNRALWG---HYA 116
HD C + R +N RDL ++G E D + G YA
Sbjct: 214 HDVLTKCGVMLTERKKNEFKTRDLVQDLGRLVKGPLEPVRDLVSGFEFAPGALGALLSYA 273
Query: 115 ELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
ELLADESNYGNY +R+YNLDSYMRLDSAATRALNV+ES
Sbjct: 274 ELLADESNYGNYRIRKYNLDSYMRLDSAATRALNVLES 311
>ref|XP_012092958.1| PREDICTED: DNA mismatch repair protein MSH2 [Jatropha curcas]
gi|643686919|gb|KDP20084.1| hypothetical protein
JCGZ_05853 [Jatropha curcas]
Length = 936
Score = 78.6 bits (192), Expect = 2e-12
Identities = 47/98 (47%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEIG------YETDADGIERLRTNRALWG---HYA 116
HD C + R +N RDL ++ E D + G YA
Sbjct: 208 HDALARCGVMLTERKKNEFKTRDLVQDLSRLVKGSIEPVRDWVSGFEFAAGALGALLSYA 267
Query: 115 ELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
ELLADESNYGNYT+R+YNLDSYMRLDSAA RALNV+ES
Sbjct: 268 ELLADESNYGNYTIRKYNLDSYMRLDSAAMRALNVLES 305
>ref|XP_010663546.1| PREDICTED: DNA mismatch repair protein MSH2 isoform X2 [Vitis
vinifera]
Length = 918
Score = 78.2 bits (191), Expect = 2e-12
Identities = 46/98 (46%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEIGYETDAD---------GIERLRTNRALWGHYA 116
HD C + R R RDL ++G G E L YA
Sbjct: 185 HDALSRCGVMLTERKRTEFKARDLVQDLGRLVKGSIEPVRDLVSGFELAPGALGLLLSYA 244
Query: 115 ELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
ELLADESNYGN+T+++YNLDSYMRLDSAA RALNV+ES
Sbjct: 245 ELLADESNYGNFTIQRYNLDSYMRLDSAAVRALNVLES 282
>ref|XP_010663545.1| PREDICTED: DNA mismatch repair protein MSH2 isoform X1 [Vitis
vinifera] gi|297734165|emb|CBI15412.3| unnamed protein
product [Vitis vinifera]
Length = 945
Score = 78.2 bits (191), Expect = 2e-12
Identities = 46/98 (46%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEIGYETDAD---------GIERLRTNRALWGHYA 116
HD C + R R RDL ++G G E L YA
Sbjct: 212 HDALSRCGVMLTERKRTEFKARDLVQDLGRLVKGSIEPVRDLVSGFELAPGALGLLLSYA 271
Query: 115 ELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
ELLADESNYGN+T+++YNLDSYMRLDSAA RALNV+ES
Sbjct: 272 ELLADESNYGNFTIQRYNLDSYMRLDSAAVRALNVLES 309
>ref|XP_008374721.1| PREDICTED: DNA mismatch repair protein MSH2 [Malus domestica]
Length = 942
Score = 77.8 bits (190), Expect = 3e-12
Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEIG------YETDADGIERLRTNRALWG---HYA 116
HD C + R + MRDL ++G E D + G YA
Sbjct: 212 HDALSRCGVMLTERKKTEFKMRDLVQDLGRLVKGSIEPVRDFVSGFEFAPGALGALLSYA 271
Query: 115 ELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
ELLADESNYGNY++++YNLDSYMRLDSAA RALNV+ES
Sbjct: 272 ELLADESNYGNYSIQRYNLDSYMRLDSAAMRALNVLES 309
>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
gi|296034481|gb|ADG85112.1| mismatch repair protein
[Solanum lycopersicum]
Length = 943
Score = 77.8 bits (190), Expect = 3e-12
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -3
Query: 121 YAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELLAD+SNYGNYTV+QYNLDSYMRLDSAA RALNVMES
Sbjct: 270 YAELLADDSNYGNYTVKQYNLDSYMRLDSAAMRALNVMES 309
>gb|AFD23453.1| mismatch repair protein, partial [Solanum cheesmaniae]
gi|379995944|gb|AFD23455.1| mismatch repair protein,
partial [Solanum lycopersicum var. cerasiforme]
gi|379995948|gb|AFD23457.1| mismatch repair protein,
partial [Solanum lycopersicum]
Length = 317
Score = 77.8 bits (190), Expect = 3e-12
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -3
Query: 121 YAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELLAD+SNYGNYTV+QYNLDSYMRLDSAA RALNVMES
Sbjct: 93 YAELLADDSNYGNYTVKQYNLDSYMRLDSAAMRALNVMES 132
>ref|XP_011009801.1| PREDICTED: DNA mismatch repair protein MSH2 [Populus euphratica]
Length = 944
Score = 77.4 bits (189), Expect = 4e-12
Identities = 47/98 (47%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEIG------YETDADGIERLRTNRALWG---HYA 116
HD C + R +N RDL ++G E D + G YA
Sbjct: 214 HDVLTKCGVMLTERKKNEFKTRDLVQDLGRLVKGPLEPVRDLVSGFEFAPGALGAVLSYA 273
Query: 115 ELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
ELLADESNYGNY +R+YNLDSYMRLDSAA RALNV+ES
Sbjct: 274 ELLADESNYGNYRIRKYNLDSYMRLDSAAMRALNVLES 311
>ref|XP_009627423.1| PREDICTED: DNA mismatch repair protein MSH2 [Nicotiana
tomentosiformis]
Length = 939
Score = 77.0 bits (188), Expect = 5e-12
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -3
Query: 121 YAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELLADESNYGNYTV+QYNL+SYMRLDSAA RALNVMES
Sbjct: 270 YAELLADESNYGNYTVKQYNLNSYMRLDSAAMRALNVMES 309
>emb|CDO98471.1| unnamed protein product [Coffea canephora]
Length = 939
Score = 77.0 bits (188), Expect = 5e-12
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 121 YAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELLADESNYGNY++RQYNLD+YMRLDSAA RALNVMES
Sbjct: 268 YAELLADESNYGNYSIRQYNLDNYMRLDSAAMRALNVMES 307
>gb|AEX14534.1| mismatch repair protein [Solanum habrochaites]
Length = 317
Score = 77.0 bits (188), Expect = 5e-12
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -3
Query: 121 YAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELLADESNYGNYTV+QYNL+SYMRLDSAA RALNVMES
Sbjct: 93 YAELLADESNYGNYTVKQYNLNSYMRLDSAAMRALNVMES 132
>gb|AFD23456.1| mismatch repair protein, partial [Solanum corneliomuelleri]
Length = 317
Score = 75.9 bits (185), Expect = 1e-11
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 121 YAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELLAD+SNYGNYTV+QYNL+SYMRLDSAA RALNVMES
Sbjct: 93 YAELLADDSNYGNYTVKQYNLNSYMRLDSAAMRALNVMES 132
>gb|AFD23454.1| mismatch repair protein, partial [Solanum chilense]
Length = 317
Score = 75.9 bits (185), Expect = 1e-11
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 121 YAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELLAD+SNYGNYTV+QYNL+SYMRLDSAA RALNVMES
Sbjct: 93 YAELLADDSNYGNYTVKQYNLNSYMRLDSAAMRALNVMES 132
>ref|XP_011648756.1| PREDICTED: DNA mismatch repair protein MSH2 [Cucumis sativus]
gi|700208703|gb|KGN63799.1| hypothetical protein
Csa_1G020900 [Cucumis sativus]
Length = 942
Score = 75.5 bits (184), Expect = 1e-11
Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEIG------YETDADGIERLRTNRALWGH---YA 116
HD C + R ++ MRDL ++ E D + A G YA
Sbjct: 212 HDVLTKCGVMLTERKKSEFKMRDLVQDLSRLIKGSVEPVRDLVSGFEFAPAALGALLAYA 271
Query: 115 ELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
ELLADESNYGNY +++YNLDSYMRLDSAA RALNV+ES
Sbjct: 272 ELLADESNYGNYNIQKYNLDSYMRLDSAAIRALNVLES 309
>ref|XP_006354733.1| PREDICTED: DNA mismatch repair protein MSH2-like [Solanum
tuberosum]
Length = 943
Score = 75.5 bits (184), Expect = 1e-11
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 121 YAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELLADESNYGN+TV+QYNL+SYMRLDSAA RALNVMES
Sbjct: 270 YAELLADESNYGNFTVKQYNLNSYMRLDSAAMRALNVMES 309
>ref|XP_009346787.1| PREDICTED: DNA mismatch repair protein MSH2-like [Pyrus x
bretschneideri]
Length = 942
Score = 75.1 bits (183), Expect = 2e-11
Identities = 45/98 (45%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEIG------YETDADGIERLRTNRALWG---HYA 116
HD C + R + MRDL ++ E D + G YA
Sbjct: 212 HDALGRCGVMLTERKKTEFKMRDLVQDLSRLVKGSIEPVRDFVSGFEFAPGALGALLSYA 271
Query: 115 ELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
ELLADESNYGNY++++YNLDSYMRLDSAA RALNV+ES
Sbjct: 272 ELLADESNYGNYSIQRYNLDSYMRLDSAAMRALNVLES 309
>ref|XP_008244032.1| PREDICTED: DNA mismatch repair protein MSH2 [Prunus mume]
Length = 942
Score = 75.1 bits (183), Expect = 2e-11
Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 16/105 (15%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEI----------------GYETDADGIERLRTNR 137
HD + C + R + MRDL ++ G+E A + L +
Sbjct: 212 HDALNRCGVMLTERKKTEFKMRDLVQDLSRLVKGSIEPVRDLVSGFEFAAGALGALLS-- 269
Query: 136 ALWGHYAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELL DESNYGNY++++YNLDSYMRLDSAA RALNV+ES
Sbjct: 270 -----YAELLGDESNYGNYSIQRYNLDSYMRLDSAAMRALNVLES 309
>ref|XP_009798771.1| PREDICTED: DNA mismatch repair protein MSH2 [Nicotiana sylvestris]
Length = 939
Score = 74.7 bits (182), Expect = 2e-11
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -3
Query: 121 YAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELLADESNYGNYTV+QY+L SYMRLDSAA RALNVMES
Sbjct: 270 YAELLADESNYGNYTVKQYSLSSYMRLDSAAMRALNVMES 309
>ref|XP_007209075.1| hypothetical protein PRUPE_ppa000981mg [Prunus persica]
gi|462404810|gb|EMJ10274.1| hypothetical protein
PRUPE_ppa000981mg [Prunus persica]
Length = 942
Score = 74.3 bits (181), Expect = 3e-11
Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 16/105 (15%)
Frame = -3
Query: 268 HDQRD*CEIDERSRSRNRSTMRDLSHEI----------------GYETDADGIERLRTNR 137
HD + C + R + MRDL ++ G+E A + L +
Sbjct: 212 HDALNRCGVMLTERKKAEFKMRDLVQDLSRLVKGSIEPVRDLVSGFEFAAGALGALLS-- 269
Query: 136 ALWGHYAELLADESNYGNYTVRQYNLDSYMRLDSAATRALNVMES 2
YAELL DESNYGNY++++YNLDSYMRLDSAA RALNV+ES
Sbjct: 270 -----YAELLGDESNYGNYSIQRYNLDSYMRLDSAAMRALNVLES 309